RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 Q3C1V9 767 aa26.15■■□□□ 1.78
CPNE1-220ENST00000458038 GPR142Q7Z601 462 aa26.15■■□□□ 1.78
CPNE1-220ENST00000458038 DIS3LQ8TF46 1054 aaKnown RBP26.15■■□□□ 1.78
CPNE1-220ENST00000458038 PAGR1Q9BTK6 254 aa26.15■■□□□ 1.78
CPNE1-220ENST00000458038 ANTXR1Q9H6X2 564 aa26.15■■□□□ 1.78
CPNE1-220ENST00000458038 MORN1Q5T089 497 aa26.14■■□□□ 1.78
CPNE1-220ENST00000458038 CWC22Q9HCG8 908 aaKnown RBP26.14■■□□□ 1.78
CPNE1-220ENST00000458038 MAGEB6P1A0A0J9YX57 407 aa26.13■■□□□ 1.77
CPNE1-220ENST00000458038 RAB3GAP1Q15042 981 aa26.13■■□□□ 1.77
CPNE1-220ENST00000458038 LBX2Q6XYB7 198 aa26.13■■□□□ 1.77
CPNE1-220ENST00000458038 CATSPERGQ6ZRH7 1159 aa26.13■■□□□ 1.77
CPNE1-220ENST00000458038 CLASRPQ8N2M8 674 aaKnown RBP26.13■■□□□ 1.77
CPNE1-220ENST00000458038 RHPN1Q8TCX5 695 aa26.13■■□□□ 1.77
CPNE1-220ENST00000458038 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.13■■□□□ 1.77
CPNE1-220ENST00000458038 RIOK1Q9BRS2 568 aaKnown RBP26.13■■□□□ 1.77
CPNE1-220ENST00000458038 CRNKL1Q9BZJ0 848 aaKnown RBP26.13■■□□□ 1.77
CPNE1-220ENST00000458038 PORCNQ9H237 461 aa26.13■■□□□ 1.77
CPNE1-220ENST00000458038 C11orf49Q9H6J7 331 aa26.13■■□□□ 1.77
CPNE1-220ENST00000458038 NDUFB9Q9Y6M9 179 aa26.13■■□□□ 1.77
CPNE1-220ENST00000458038 BMP8BP34820 402 aa26.12■■□□□ 1.77
CPNE1-220ENST00000458038 RPAP2Q8IXW5 612 aaPredicted RBP26.12■■□□□ 1.77
CPNE1-220ENST00000458038 APBA2Q99767 749 aa26.12■■□□□ 1.77
CPNE1-220ENST00000458038 PEX10O60683 326 aa26.11■■□□□ 1.77
CPNE1-220ENST00000458038 HMMRO75330 724 aa26.11■■□□□ 1.77
CPNE1-220ENST00000458038 POLR3DP05423 398 aaPredicted RBP26.11■■□□□ 1.77
CPNE1-220ENST00000458038 MNX1P50219 401 aaPredicted RBP26.11■■□□□ 1.77
CPNE1-220ENST00000458038 CACNB2Q08289 660 aaPredicted RBP26.11■■□□□ 1.77
CPNE1-220ENST00000458038 SLC9C2Q5TAH2 1124 aa26.11■■□□□ 1.77
CPNE1-220ENST00000458038 KIF1BPQ96EK5 621 aa26.11■■□□□ 1.77
CPNE1-220ENST00000458038 ZBED9Q6R2W3 1325 aa26.11■■□□□ 1.77
CPNE1-220ENST00000458038 LAMA3Q16787 3333 aa26.1■■□□□ 1.77
CPNE1-220ENST00000458038 SHMT1P34896 483 aa26.1■■□□□ 1.77
CPNE1-220ENST00000458038 PLCD1P51178 756 aa26.1■■□□□ 1.77
CPNE1-220ENST00000458038 ZYXQ15942 572 aaKnown RBP26.1■■□□□ 1.77
CPNE1-220ENST00000458038 PANK1Q8TE04 598 aa26.1■■□□□ 1.77
CPNE1-220ENST00000458038 STAP2Q9UGK3 403 aa26.1■■□□□ 1.77
CPNE1-220ENST00000458038 DDX60LQ5H9U9 1706 aaKnown RBP26.1■■□□□ 1.77
CPNE1-220ENST00000458038 PDE6AP16499 860 aa26.09■■□□□ 1.77
CPNE1-220ENST00000458038 VCAM1P19320 739 aa26.09■■□□□ 1.77
CPNE1-220ENST00000458038 MAP2K5Q13163 448 aa26.09■■□□□ 1.77
CPNE1-220ENST00000458038 POTEEQ6S8J3 1075 aa26.09■■□□□ 1.77
CPNE1-220ENST00000458038 MIER1Q8N108 512 aa26.09■■□□□ 1.77
CPNE1-220ENST00000458038 EDC3Q96F86 508 aaKnown RBP26.09■■□□□ 1.77
CPNE1-220ENST00000458038 IL1RAPL2Q9NP60 686 aa26.09■■□□□ 1.77
CPNE1-220ENST00000458038 SLC15A5A6NIM6 579 aa26.08■■□□□ 1.77
CPNE1-220ENST00000458038 GABPAQ06546 454 aa26.08■■□□□ 1.77
CPNE1-220ENST00000458038 C7orf61Q8IZ16 206 aa26.08■■□□□ 1.77
CPNE1-220ENST00000458038 GDF15Q99988 308 aa26.08■■□□□ 1.77
CPNE1-220ENST00000458038 CHMP4BQ9H444 224 aaKnown RBP26.08■■□□□ 1.77
CPNE1-220ENST00000458038 IVNS1ABPQ9Y6Y0 642 aa26.08■■□□□ 1.77
CPNE1-220ENST00000458038 CNMDO75829 334 aa26.07■■□□□ 1.76
CPNE1-220ENST00000458038 IFIT2P09913 472 aaKnown RBP26.07■■□□□ 1.76
CPNE1-220ENST00000458038 MFSD14CQ5VZR4 134 aa26.07■■□□□ 1.76
CPNE1-220ENST00000458038 ACER1Q8TDN7 264 aa26.07■■□□□ 1.76
CPNE1-220ENST00000458038 MCM9Q9NXL9 1143 aa26.07■■□□□ 1.76
CPNE1-220ENST00000458038 NAV1Q8NEY1 1877 aa26.06■■□□□ 1.76
CPNE1-220ENST00000458038 RAB11FIP3O75154 756 aa26.06■■□□□ 1.76
CPNE1-220ENST00000458038 LHX8Q68G74 356 aa26.06■■□□□ 1.76
CPNE1-220ENST00000458038 HOXC10Q9NYD6 342 aa26.06■■□□□ 1.76
CPNE1-220ENST00000458038 DDX19BQ9UMR2 479 aa26.06■■□□□ 1.76
CPNE1-220ENST00000458038 HOXC6P09630 235 aa26.05■■□□□ 1.76
CPNE1-220ENST00000458038 PTPREP23469 700 aa26.05■■□□□ 1.76
CPNE1-220ENST00000458038 CCL14Q16627 93 aa26.05■■□□□ 1.76
CPNE1-220ENST00000458038 RPAP3Q9H6T3 665 aaPredicted RBP26.05■■□□□ 1.76
CPNE1-220ENST00000458038 ZNF532Q9HCE3 1301 aa26.05■■□□□ 1.76
CPNE1-220ENST00000458038 DNAH12Q6ZR08 3092 aa26.04■■□□□ 1.76
CPNE1-220ENST00000458038 COL6A1P12109 1028 aa26.04■■□□□ 1.76
CPNE1-220ENST00000458038 GUCY1A2P33402 732 aa26.04■■□□□ 1.76
CPNE1-220ENST00000458038 SEPT2Q15019 361 aa26.04■■□□□ 1.76
CPNE1-220ENST00000458038 WDR78Q5VTH9 848 aa26.04■■□□□ 1.76
CPNE1-220ENST00000458038 GPR153Q6NV75 609 aa26.04■■□□□ 1.76
CPNE1-220ENST00000458038 SWAP70Q9UH65 585 aa26.04■■□□□ 1.76
CPNE1-220ENST00000458038 SPDYE16A6NNV3 312 aaPredicted RBP26.03■■□□□ 1.76
CPNE1-220ENST00000458038 GOLIM4O00461 696 aa26.03■■□□□ 1.76
CPNE1-220ENST00000458038 STRNO43815 780 aa26.03■■□□□ 1.76
CPNE1-220ENST00000458038 MSCO60682 206 aa26.03■■□□□ 1.76
CPNE1-220ENST00000458038 CCND3P30281 292 aaPredicted RBP26.03■■□□□ 1.76
CPNE1-220ENST00000458038 COG2Q14746 738 aa26.03■■□□□ 1.76
CPNE1-220ENST00000458038 DNAJC2Q99543 621 aaKnown RBP26.03■■□□□ 1.76
CPNE1-220ENST00000458038 DCP1AQ9NPI6 582 aaPredicted RBP26.03■■□□□ 1.76
CPNE1-220ENST00000458038 ZMYND8Q9ULU4 1186 aaPredicted RBP26.03■■□□□ 1.76
CPNE1-220ENST00000458038 TCRBV5S4A2TA0A5A2 114 aa26.02■■□□□ 1.76
CPNE1-220ENST00000458038 MPHOSPH10O00566 681 aaKnown RBP26.02■■□□□ 1.76
CPNE1-220ENST00000458038 ATP2B2Q01814 1243 aa26.02■■□□□ 1.76
CPNE1-220ENST00000458038 GRB14Q14449 540 aa26.02■■□□□ 1.76
CPNE1-220ENST00000458038 DIEXFQ68CQ4 756 aaKnown RBP26.02■■□□□ 1.76
CPNE1-220ENST00000458038 TMEM179Q6ZVK1 233 aa26.02■■□□□ 1.76
CPNE1-220ENST00000458038 ATP8A2Q9NTI2 1148 aa26.02■■□□□ 1.76
CPNE1-220ENST00000458038 ZBTB40Q9NUA8 1239 aa26.02■■□□□ 1.76
CPNE1-220ENST00000458038 BTBD7Q9P203 1132 aa26.02■■□□□ 1.76
CPNE1-220ENST00000458038 PFASO15067 1338 aa26.02■■□□□ 1.76
CPNE1-220ENST00000458038 MYH8P13535 1937 aa26.02■■□□□ 1.76
CPNE1-220ENST00000458038 MB21D1Q8N884 522 aa26.01■■□□□ 1.75
CPNE1-220ENST00000458038 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.01■■□□□ 1.754e-7■■■■■ 34.7
CPNE1-220ENST00000458038 APBB1O00213 710 aa26■■□□□ 1.75
CPNE1-220ENST00000458038 LPAR1Q92633 364 aa26■■□□□ 1.75
CPNE1-220ENST00000458038 SH2D4AQ9H788 454 aa26■■□□□ 1.75
CPNE1-220ENST00000458038 PAG1Q9NWQ8 432 aa26■■□□□ 1.75
CPNE1-220ENST00000458038 ATP5JP18859 108 aa25.99■■□□□ 1.75
CPNE1-220ENST00000458038 SIRT2Q8IXJ6 389 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms