RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 WDR18Q9BV38 432 aa19.09■□□□□ 0.65
CHCHD3-204ENST00000457942 GINM1Q9NU53 330 aa19.09■□□□□ 0.65
CHCHD3-204ENST00000457942 EYSQ5T1H1 3165 aa19.08■□□□□ 0.65
CHCHD3-204ENST00000457942 USP17L10C9JJH3 530 aa19.08■□□□□ 0.64
CHCHD3-204ENST00000457942 PDE6AP16499 860 aa19.08■□□□□ 0.64
CHCHD3-204ENST00000457942 LRIT3Q3SXY7 679 aa19.08■□□□□ 0.64
CHCHD3-204ENST00000457942 SH3D19Q5HYK7 790 aa19.08■□□□□ 0.64
CHCHD3-204ENST00000457942 TTC6Q86TZ1 520 aa19.08■□□□□ 0.64
CHCHD3-204ENST00000457942 METTL16Q86W50 562 aaKnown RBP19.08■□□□□ 0.64
CHCHD3-204ENST00000457942 FEZ1Q99689 392 aa19.08■□□□□ 0.64
CHCHD3-204ENST00000457942 COL25A1Q9BXS0 654 aaPredicted RBP19.08■□□□□ 0.64
CHCHD3-204ENST00000457942 SERPINB13Q9UIV8 391 aa19.08■□□□□ 0.64
CHCHD3-204ENST00000457942 GH2P01242 217 aa19.07■□□□□ 0.64
CHCHD3-204ENST00000457942 POLR3DP05423 398 aaPredicted RBP19.07■□□□□ 0.64
CHCHD3-204ENST00000457942 CAPN2P17655 700 aa19.07■□□□□ 0.64
CHCHD3-204ENST00000457942 JAG1P78504 1218 aa19.07■□□□□ 0.64
CHCHD3-204ENST00000457942 C20orf194Q5TEA3 1177 aa19.07■□□□□ 0.64
CHCHD3-204ENST00000457942 GPR153Q6NV75 609 aa19.07■□□□□ 0.64
CHCHD3-204ENST00000457942 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.07■□□□□ 0.64
CHCHD3-204ENST00000457942 CRNKL1Q9BZJ0 848 aaKnown RBP19.07■□□□□ 0.64
CHCHD3-204ENST00000457942 GJD2Q9UKL4 321 aa19.07■□□□□ 0.64
CHCHD3-204ENST00000457942 ZNF532Q9HCE3 1301 aa19.06■□□□□ 0.64
CHCHD3-204ENST00000457942 C19orf81C9J6K1 198 aa19.06■□□□□ 0.64
CHCHD3-204ENST00000457942 RAB3GAP1Q15042 981 aa19.06■□□□□ 0.64
CHCHD3-204ENST00000457942 RIOK1Q9BRS2 568 aaKnown RBP19.06■□□□□ 0.64
CHCHD3-204ENST00000457942 OGDHLQ9ULD0 1010 aa19.06■□□□□ 0.64
CHCHD3-204ENST00000457942 PDE3AQ14432 1141 aa19.05■□□□□ 0.64
CHCHD3-204ENST00000457942 ZYXQ15942 572 aaKnown RBP19.05■□□□□ 0.64
CHCHD3-204ENST00000457942 LRRC26Q2I0M4 334 aa19.05■□□□□ 0.64
CHCHD3-204ENST00000457942 EHD4Q9H223 541 aa19.05■□□□□ 0.64
CHCHD3-204ENST00000457942 BOLA2Q9H3K6 86 aa19.05■□□□□ 0.64
CHCHD3-204ENST00000457942 PAG1Q9NWQ8 432 aa19.05■□□□□ 0.64
CHCHD3-204ENST00000457942 DNAH12Q6ZR08 3092 aa19.04■□□□□ 0.64
CHCHD3-204ENST00000457942 MYH7P12883 1935 aa19.04■□□□□ 0.64
CHCHD3-204ENST00000457942 CCND3P30281 292 aaPredicted RBP19.04■□□□□ 0.64
CHCHD3-204ENST00000457942 ABCB5Q2M3G0 1257 aa19.04■□□□□ 0.64
CHCHD3-204ENST00000457942 CERKLQ49MI3 558 aaPredicted RBP19.04■□□□□ 0.64
CHCHD3-204ENST00000457942 USP17L2Q6R6M4 530 aa19.04■□□□□ 0.64
CHCHD3-204ENST00000457942 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.04■□□□□ 0.64
CHCHD3-204ENST00000457942 EDC3Q96F86 508 aaKnown RBP19.04■□□□□ 0.64
CHCHD3-204ENST00000457942 LRRCC1Q9C099 1032 aa19.04■□□□□ 0.64
CHCHD3-204ENST00000457942 CABP5Q9NP86 173 aa19.04■□□□□ 0.64
CHCHD3-204ENST00000457942 MCM9Q9NXL9 1143 aa19.04■□□□□ 0.64
CHCHD3-204ENST00000457942 MYH8P13535 1937 aa19.04■□□□□ 0.64
CHCHD3-204ENST00000457942 ZKSCAN1P17029 563 aaPredicted RBP19.03■□□□□ 0.64
CHCHD3-204ENST00000457942 HERVK_113P62684 666 aa19.03■□□□□ 0.64
CHCHD3-204ENST00000457942 CCL14Q16627 93 aa19.03■□□□□ 0.64
CHCHD3-204ENST00000457942 CCAR1Q8IX12 1150 aaKnown RBP19.03■□□□□ 0.64
CHCHD3-204ENST00000457942 PAGR1Q9BTK6 254 aa19.03■□□□□ 0.64
CHCHD3-204ENST00000457942 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.03■□□□□ 0.64
CHCHD3-204ENST00000457942 TXNRD2Q9NNW7 524 aa19.03■□□□□ 0.64
CHCHD3-204ENST00000457942 VCANP13611 3396 aa19.03■□□□□ 0.64
CHCHD3-204ENST00000457942 MPHOSPH10O00566 681 aaKnown RBP19.02■□□□□ 0.64
CHCHD3-204ENST00000457942 HOXA7P31268 230 aaPredicted RBP19.02■□□□□ 0.64
CHCHD3-204ENST00000457942 PLCD1P51178 756 aa19.02■□□□□ 0.64
CHCHD3-204ENST00000457942 CACNB2Q08289 660 aaPredicted RBP19.02■□□□□ 0.64
CHCHD3-204ENST00000457942 MAP3K21Q5TCX8 1036 aa19.02■□□□□ 0.64
CHCHD3-204ENST00000457942 TATDN1Q6P1N9 297 aa19.02■□□□□ 0.64
CHCHD3-204ENST00000457942 LCORLQ8N3X6 602 aa19.02■□□□□ 0.64
CHCHD3-204ENST00000457942 SDR42E1Q8WUS8 393 aa19.02■□□□□ 0.64
CHCHD3-204ENST00000457942 GUCD1Q96NT3 240 aa19.02■□□□□ 0.64
CHCHD3-204ENST00000457942 P2RX7Q99572 595 aaKnown RBP19.02■□□□□ 0.64
CHCHD3-204ENST00000457942 NUDT12Q9BQG2 462 aa19.02■□□□□ 0.64
CHCHD3-204ENST00000457942 ARMT1Q9H993 441 aa19.02■□□□□ 0.64
CHCHD3-204ENST00000457942 CWC22Q9HCG8 908 aaKnown RBP19.02■□□□□ 0.64
CHCHD3-204ENST00000457942 MORF4L1Q9UBU8 362 aa19.02■□□□□ 0.64
CHCHD3-204ENST00000457942 FRMPD3Q5JV73 1810 aa19.02■□□□□ 0.63
CHCHD3-204ENST00000457942 SMARCA5O60264 1052 aaPredicted RBP19.01■□□□□ 0.63
CHCHD3-204ENST00000457942 ATP5JP18859 108 aa19.01■□□□□ 0.63
CHCHD3-204ENST00000457942 GPRC5AQ8NFJ5 357 aa19.01■□□□□ 0.63
CHCHD3-204ENST00000457942 SOCS4Q8WXH5 440 aa19.01■□□□□ 0.63
CHCHD3-204ENST00000457942 BAZ2AQ9UIF9 1905 aaKnown RBP19■□□□□ 0.63
CHCHD3-204ENST00000457942 TCRBV5S4A2TA0A5A2 114 aa19■□□□□ 0.63
CHCHD3-204ENST00000457942 MBD4O95243 580 aa19■□□□□ 0.63
CHCHD3-204ENST00000457942 SHMT1P34896 483 aa19■□□□□ 0.63
CHCHD3-204ENST00000457942 USP14P54578 494 aa19■□□□□ 0.63
CHCHD3-204ENST00000457942 GTF3C2Q8WUA4 911 aaPredicted RBP19■□□□□ 0.63
CHCHD3-204ENST00000457942 HAUS7Q99871 368 aa19■□□□□ 0.63
CHCHD3-204ENST00000457942 PORCNQ9H237 461 aa19■□□□□ 0.63
CHCHD3-204ENST00000457942 EMILIN3Q9NT22 766 aa19■□□□□ 0.63
CHCHD3-204ENST00000457942 COL6A1P12109 1028 aa18.99■□□□□ 0.63
CHCHD3-204ENST00000457942 ADD2P35612 726 aa18.99■□□□□ 0.63
CHCHD3-204ENST00000457942 AMOTL1Q8IY63 956 aa18.99■□□□□ 0.63
CHCHD3-204ENST00000457942 DDRGK1Q96HY6 314 aa18.99■□□□□ 0.63
CHCHD3-204ENST00000457942 DCP1AQ9NPI6 582 aaPredicted RBP18.99■□□□□ 0.63
CHCHD3-204ENST00000457942 SPTBN5Q9NRC6 3674 aaKnown RBP18.98■□□□□ 0.63
CHCHD3-204ENST00000457942 ATN1P54259 1190 aaPredicted RBP18.98■□□□□ 0.63
CHCHD3-204ENST00000457942 SLFNL1Q499Z3 407 aa18.98■□□□□ 0.63
CHCHD3-204ENST00000457942 GPATCH3Q96I76 525 aa18.98■□□□□ 0.63
CHCHD3-204ENST00000457942 USP17L15C9J2P7 530 aa18.97■□□□□ 0.63
CHCHD3-204ENST00000457942 USP17L13C9JLJ4 530 aa18.97■□□□□ 0.63
CHCHD3-204ENST00000457942 USP17L11C9JVI0 530 aa18.97■□□□□ 0.63
CHCHD3-204ENST00000457942 USP17L18D6R9N7 530 aa18.97■□□□□ 0.63
CHCHD3-204ENST00000457942 USP17L22D6RA61 530 aa18.97■□□□□ 0.63
CHCHD3-204ENST00000457942 USP17L17D6RBQ6 530 aa18.97■□□□□ 0.63
CHCHD3-204ENST00000457942 USP17L19D6RCP7 530 aa18.97■□□□□ 0.63
CHCHD3-204ENST00000457942 USP17L20D6RJB6 530 aa18.97■□□□□ 0.63
CHCHD3-204ENST00000457942 CYP2D6P10635 497 aa18.97■□□□□ 0.63
CHCHD3-204ENST00000457942 VCAM1P19320 739 aa18.97■□□□□ 0.63
CHCHD3-204ENST00000457942 MAPK4P31152 587 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms