RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 PPP1R9AQ9ULJ8 1098 aa5.04□□□□□ -1.6
HMGB3P30-201ENST00000457863 THRAP3Q9Y2W1 955 aaKnown RBP5.04□□□□□ -1.6
HMGB3P30-201ENST00000457863 DAGLAQ9Y4D2 1042 aa5.04□□□□□ -1.6
HMGB3P30-201ENST00000457863 EID1Q9Y6B2 187 aa5.04□□□□□ -1.6
HMGB3P30-201ENST00000457863 SCINQ9Y6U3 715 aa5.04□□□□□ -1.6
HMGB3P30-201ENST00000457863 IFRD1O00458 451 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P30-201ENST00000457863 ANP32CO43423 234 aa5.03□□□□□ -1.6
HMGB3P30-201ENST00000457863 GSTP1P09211 210 aaKnown RBP5.03□□□□□ -1.6
HMGB3P30-201ENST00000457863 FGRP09769 529 aa5.03□□□□□ -1.6
HMGB3P30-201ENST00000457863 GNALP38405 381 aa5.03□□□□□ -1.6
HMGB3P30-201ENST00000457863 DAB2P98082 770 aa5.03□□□□□ -1.6
HMGB3P30-201ENST00000457863 RBM10P98175 930 aaKnown RBP5.03□□□□□ -1.6
HMGB3P30-201ENST00000457863 ID3Q02535 119 aa5.03□□□□□ -1.6
HMGB3P30-201ENST00000457863 LMOD3Q0VAK6 560 aa5.03□□□□□ -1.6
HMGB3P30-201ENST00000457863 SERINC3Q13530 473 aa5.03□□□□□ -1.6
HMGB3P30-201ENST00000457863 ZRSR2Q15696 482 aaKnown RBP5.03□□□□□ -1.6
HMGB3P30-201ENST00000457863 ENOX2Q16206 610 aaKnown RBP5.03□□□□□ -1.6
HMGB3P30-201ENST00000457863 OGFOD3Q6PK18 319 aa5.03□□□□□ -1.6
HMGB3P30-201ENST00000457863 FERMT3Q86UX7 667 aa5.03□□□□□ -1.6
HMGB3P30-201ENST00000457863 WFDC3Q8IUB2 231 aa5.03□□□□□ -1.6
HMGB3P30-201ENST00000457863 STK11IPQ8N1F8 1099 aa5.03□□□□□ -1.6
HMGB3P30-201ENST00000457863 FLCNQ8NFG4 579 aa5.03□□□□□ -1.6
HMGB3P30-201ENST00000457863 PAGR1Q9BTK6 254 aa5.03□□□□□ -1.6
HMGB3P30-201ENST00000457863 MRS2Q9HD23 443 aa5.03□□□□□ -1.6
HMGB3P30-201ENST00000457863 CASS4Q9NQ75 786 aa5.03□□□□□ -1.6
HMGB3P30-201ENST00000457863 DDX41Q9UJV9 622 aaKnown RBP5.03□□□□□ -1.6
HMGB3P30-201ENST00000457863 ZNF862O60290 1169 aa5.02□□□□□ -1.61
HMGB3P30-201ENST00000457863 PRPF40AO75400 957 aaKnown RBP5.02□□□□□ -1.61
HMGB3P30-201ENST00000457863 JUNBP17275 347 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P30-201ENST00000457863 POU5F1BQ06416 359 aa5.02□□□□□ -1.61
HMGB3P30-201ENST00000457863 FMR1Q06787 632 aaKnown RBP eCLIP5.02□□□□□ -1.61
HMGB3P30-201ENST00000457863 HDAC1Q13547 482 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P30-201ENST00000457863 CYP27C1Q4G0S4 372 aa5.02□□□□□ -1.61
HMGB3P30-201ENST00000457863 NBPF6Q5VWK0 638 aa5.02□□□□□ -1.61
HMGB3P30-201ENST00000457863 PDZD3Q86UT5 571 aa5.02□□□□□ -1.61
HMGB3P30-201ENST00000457863 TP53INP2Q8IXH6 220 aa5.02□□□□□ -1.61
HMGB3P30-201ENST00000457863 ZNF654Q8IZM8 581 aa5.02□□□□□ -1.61
HMGB3P30-201ENST00000457863 SAMD3Q8N6K7 520 aa5.02□□□□□ -1.61
HMGB3P30-201ENST00000457863 TMC1Q8TDI8 760 aa5.02□□□□□ -1.61
HMGB3P30-201ENST00000457863 NBPF4Q96M43 638 aa5.02□□□□□ -1.61
HMGB3P30-201ENST00000457863 FANCD2OSQ96PS1 177 aa5.02□□□□□ -1.61
HMGB3P30-201ENST00000457863 DUSP9Q99956 384 aaKnown RBP5.02□□□□□ -1.61
HMGB3P30-201ENST00000457863 SLKQ9H2G2 1235 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P30-201ENST00000457863 PIDD1Q9HB75 910 aa5.02□□□□□ -1.61
HMGB3P30-201ENST00000457863 LRRC4CQ9HCJ2 640 aa5.02□□□□□ -1.61
HMGB3P30-201ENST00000457863 ANAPC4Q9UJX5 808 aa5.02□□□□□ -1.61
HMGB3P30-201ENST00000457863 TREHO43280 583 aa5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 CAND2O75155 1236 aa5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 ZRANB2O95218 330 aaKnown RBP eCLIP5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 LDHBP07195 334 aaKnown RBP5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 SLFN14P0C7P3 912 aa5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 COL6A1P12109 1028 aa5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 RACK1P63244 317 aaKnown RBP5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 POU5F1Q01860 360 aaKnown RBP5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 PPP2R3AQ06190 1150 aa5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 MAPRE1Q15691 268 aaKnown RBP5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 EFCAB2Q5VUJ9 269 aa5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 ICE2Q659A1 982 aa5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 DTHD1Q6ZMT9 781 aa5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 TMC7Q7Z402 723 aa5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 EPS8L3Q8TE67 593 aaKnown RBP5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 BCL7CQ8WUZ0 217 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 TSR2Q969E8 191 aaKnown RBP5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 MISP3Q96FF7 219 aa5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 WDR89Q96FK6 387 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 CEP89Q96ST8 783 aa5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 INO80BQ9C086 356 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 RNF19AQ9NV58 838 aa5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 TMEM39AQ9NV64 488 aa5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 VTI1BQ9UEU0 232 aa5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 SLC5A6Q9Y289 635 aa5.01□□□□□ -1.61
HMGB3P30-201ENST00000457863 PLIN1O60240 522 aa5□□□□□ -1.61
HMGB3P30-201ENST00000457863 CKAP2LQ8IYA6 745 aa5□□□□□ -1.61
HMGB3P30-201ENST00000457863 SMYD4Q8IYR2 804 aaPredicted RBP5□□□□□ -1.61
HMGB3P30-201ENST00000457863 SVIPQ8NHG7 77 aa5□□□□□ -1.61
HMGB3P30-201ENST00000457863 PPM1EQ8WY54 764 aa5□□□□□ -1.61
HMGB3P30-201ENST00000457863 MPHOSPH6Q99547 160 aaKnown RBP5□□□□□ -1.61
HMGB3P30-201ENST00000457863 ARPC5LQ9BPX5 153 aa5□□□□□ -1.61
HMGB3P30-201ENST00000457863 C12orf49Q9H741 205 aa5□□□□□ -1.61
HMGB3P30-201ENST00000457863 MKNK2Q9HBH9 465 aa5□□□□□ -1.61
HMGB3P30-201ENST00000457863 DISC1Q9NRI5 854 aa5□□□□□ -1.61
HMGB3P30-201ENST00000457863 GPN3Q9UHW5 284 aaPredicted RBP5□□□□□ -1.61
HMGB3P30-201ENST00000457863 TPX2Q9ULW0 747 aaKnown RBP5□□□□□ -1.61
HMGB3P30-201ENST00000457863 RPGRIP1LQ68CZ1 1315 aa4.99□□□□□ -1.61
HMGB3P30-201ENST00000457863 ATF4P18848 351 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P30-201ENST00000457863 ZNF157P51786 506 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P30-201ENST00000457863 FCGRTP55899 365 aa4.99□□□□□ -1.61
HMGB3P30-201ENST00000457863 FAM193AP78312 1265 aa4.99□□□□□ -1.61
HMGB3P30-201ENST00000457863 PLCB3Q01970 1234 aa4.99□□□□□ -1.61
HMGB3P30-201ENST00000457863 PSMD2Q13200 908 aa4.99□□□□□ -1.61
HMGB3P30-201ENST00000457863 CDK5R2Q13319 367 aa4.99□□□□□ -1.61
HMGB3P30-201ENST00000457863 DSC3Q14574 896 aa4.99□□□□□ -1.61
HMGB3P30-201ENST00000457863 ARSHQ5FYA8 562 aa4.99□□□□□ -1.61
HMGB3P30-201ENST00000457863 PI16Q6UXB8 463 aa4.99□□□□□ -1.61
HMGB3P30-201ENST00000457863 RAVER1Q8IY67 606 aaKnown RBP4.99□□□□□ -1.61
HMGB3P30-201ENST00000457863 PDILTQ8N807 584 aa4.99□□□□□ -1.61
HMGB3P30-201ENST00000457863 C1orf131Q8NDD1 294 aaKnown RBP4.99□□□□□ -1.61
HMGB3P30-201ENST00000457863 NETO1Q8TDF5 533 aa4.99□□□□□ -1.61
HMGB3P30-201ENST00000457863 ASIC4Q96FT7 647 aa4.99□□□□□ -1.61
HMGB3P30-201ENST00000457863 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms