RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 KDM4AO75164 1064 aa16.65■□□□□ 0.26
TIMP1-205ENST00000456754 TSPY3P0CV98 308 aa16.65■□□□□ 0.26
TIMP1-205ENST00000456754 TSPY8P0CW00 308 aa16.65■□□□□ 0.26
TIMP1-205ENST00000456754 ZBTB48P10074 688 aaPredicted RBP16.65■□□□□ 0.26
TIMP1-205ENST00000456754 EEF2P13639 858 aaKnown RBP16.65■□□□□ 0.26
TIMP1-205ENST00000456754 ATP2B2Q01814 1243 aa16.65■□□□□ 0.26
TIMP1-205ENST00000456754 MTMR2Q13614 643 aa16.65■□□□□ 0.26
TIMP1-205ENST00000456754 ADCK5Q3MIX3 580 aa16.65■□□□□ 0.26
TIMP1-205ENST00000456754 RASGRP2Q7LDG7 609 aa16.65■□□□□ 0.26
TIMP1-205ENST00000456754 CHST3Q7LGC8 479 aa16.65■□□□□ 0.26
TIMP1-205ENST00000456754 ZNF280CQ8ND82 737 aa16.65■□□□□ 0.26
TIMP1-205ENST00000456754 NEDD1Q8NHV4 660 aa16.65■□□□□ 0.26
TIMP1-205ENST00000456754 CHMP4CQ96CF2 233 aa16.65■□□□□ 0.26
TIMP1-205ENST00000456754 CCDC17Q96LX7 622 aa16.65■□□□□ 0.26
TIMP1-205ENST00000456754 KCNH4Q9UQ05 1017 aa16.65■□□□□ 0.26
TIMP1-205ENST00000456754 PLIN4Q96Q06 1357 aa16.64■□□□□ 0.26
TIMP1-205ENST00000456754 LOC285556D6RIA3 1793 aa16.64■□□□□ 0.25
TIMP1-205ENST00000456754 CCL15-CCL14A0A0B4J2E2 113 aa16.64■□□□□ 0.25
TIMP1-205ENST00000456754 TSPY2A6NKD2 308 aa16.64■□□□□ 0.25
TIMP1-205ENST00000456754 IGF2BP3O00425 579 aaKnown RBP eCLIP16.64■□□□□ 0.25
TIMP1-205ENST00000456754 REC8O95072 547 aa16.64■□□□□ 0.25
TIMP1-205ENST00000456754 HMGCS2P54868 508 aa16.64■□□□□ 0.25
TIMP1-205ENST00000456754 ICA1Q05084 483 aa16.64■□□□□ 0.25
TIMP1-205ENST00000456754 NOGQ13253 232 aa16.64■□□□□ 0.25
TIMP1-205ENST00000456754 CCL15Q16663 113 aa16.64■□□□□ 0.25
TIMP1-205ENST00000456754 HSPA4P34932 840 aa16.63■□□□□ 0.25
TIMP1-205ENST00000456754 TREML2Q5T2D2 321 aa16.63■□□□□ 0.25
TIMP1-205ENST00000456754 LRRC47Q8N1G4 583 aaKnown RBP16.63■□□□□ 0.25
TIMP1-205ENST00000456754 WDR18Q9BV38 432 aa16.63■□□□□ 0.25
TIMP1-205ENST00000456754 RNF41Q9H4P4 317 aaPredicted RBP16.63■□□□□ 0.25
TIMP1-205ENST00000456754 ZNF287Q9HBT7 754 aa16.63■□□□□ 0.25
TIMP1-205ENST00000456754 GPHNQ9NQX3 736 aaPredicted RBP16.63■□□□□ 0.25
TIMP1-205ENST00000456754 EMILIN3Q9NT22 766 aa16.63■□□□□ 0.25
TIMP1-205ENST00000456754 ZSWIM5Q9P217 1185 aa16.63■□□□□ 0.25
TIMP1-205ENST00000456754 TAOK2Q9UL54 1235 aa16.63■□□□□ 0.25
TIMP1-205ENST00000456754 A0A0G2JLL6 359 aaPredicted RBP16.62■□□□□ 0.25
TIMP1-205ENST00000456754 CPA1P15085 419 aa16.62■□□□□ 0.25
TIMP1-205ENST00000456754 BACE1P56817 501 aa16.62■□□□□ 0.25
TIMP1-205ENST00000456754 ANTXR2P58335 489 aa16.62■□□□□ 0.25
TIMP1-205ENST00000456754 SNAPC2Q13487 334 aa16.62■□□□□ 0.25
TIMP1-205ENST00000456754 GPAT2Q6NUI2 795 aa16.62■□□□□ 0.25
TIMP1-205ENST00000456754 GADL1Q6ZQY3 521 aa16.62■□□□□ 0.25
TIMP1-205ENST00000456754 PRRT2Q7Z6L0 340 aaPredicted RBP16.62■□□□□ 0.25
TIMP1-205ENST00000456754 FAM43AQ8N2R8 423 aa16.62■□□□□ 0.25
TIMP1-205ENST00000456754 KCNB2Q92953 911 aa16.62■□□□□ 0.25
TIMP1-205ENST00000456754 AS3MTQ9HBK9 375 aa16.62■□□□□ 0.25
TIMP1-205ENST00000456754 SENP2Q9HC62 589 aa16.62■□□□□ 0.25
TIMP1-205ENST00000456754 GINM1Q9NU53 330 aa16.62■□□□□ 0.25
TIMP1-205ENST00000456754 MTMR4Q9NYA4 1195 aa16.62■□□□□ 0.25
TIMP1-205ENST00000456754 CLIP2Q9UDT6 1046 aa16.62■□□□□ 0.25
TIMP1-205ENST00000456754 SNX14Q9Y5W7 946 aa16.62■□□□□ 0.25
TIMP1-205ENST00000456754 PCNTO95613 3336 aa16.61■□□□□ 0.25
TIMP1-205ENST00000456754 BTBD19C9JJ37 291 aa16.61■□□□□ 0.25
TIMP1-205ENST00000456754 CXCL11O14625 94 aa16.61■□□□□ 0.25
TIMP1-205ENST00000456754 GTF2A2P52657 109 aa16.61■□□□□ 0.25
TIMP1-205ENST00000456754 RCSD1Q6JBY9 416 aa16.61■□□□□ 0.25
TIMP1-205ENST00000456754 MB21D2Q8IYB1 491 aaPredicted RBP16.61■□□□□ 0.25
TIMP1-205ENST00000456754 SPICE1Q8N0Z3 855 aa16.61■□□□□ 0.25
TIMP1-205ENST00000456754 ESR2Q92731 530 aa16.61■□□□□ 0.25
TIMP1-205ENST00000456754 TCEANC2Q96MN5 208 aa16.61■□□□□ 0.25
TIMP1-205ENST00000456754 FEZ1Q99689 392 aa16.61■□□□□ 0.25
TIMP1-205ENST00000456754 KANSL2Q9H9L4 492 aa16.61■□□□□ 0.25
TIMP1-205ENST00000456754 TESPA1A2RU30 521 aaPredicted RBP16.6■□□□□ 0.25
TIMP1-205ENST00000456754 MANSC4A6NHS7 340 aaPredicted RBP16.6■□□□□ 0.25
TIMP1-205ENST00000456754 USP17L10C9JJH3 530 aa16.6■□□□□ 0.25
TIMP1-205ENST00000456754 CETPP11597 493 aa16.6■□□□□ 0.25
TIMP1-205ENST00000456754 LRRC2Q9BYS8 371 aa16.6■□□□□ 0.25
TIMP1-205ENST00000456754 KRT23Q9C075 422 aa16.6■□□□□ 0.25
TIMP1-205ENST00000456754 R3HDMLQ9H3Y0 253 aa16.6■□□□□ 0.25
TIMP1-205ENST00000456754 TSKSQ9UJT2 592 aa16.6■□□□□ 0.25
TIMP1-205ENST00000456754 RAD21O60216 631 aa16.59■□□□□ 0.25
TIMP1-205ENST00000456754 PCP11498 1178 aaKnown RBP16.59■□□□□ 0.25
TIMP1-205ENST00000456754 MAP2K2P36507 400 aa16.59■□□□□ 0.25
TIMP1-205ENST00000456754 TM4SF4P48230 202 aa16.59■□□□□ 0.25
TIMP1-205ENST00000456754 SH3D19Q5HYK7 790 aa16.59■□□□□ 0.25
TIMP1-205ENST00000456754 IFNL1Q8IU54 200 aa16.59■□□□□ 0.25
TIMP1-205ENST00000456754 NCOA7Q8NI08 942 aa16.59■□□□□ 0.25
TIMP1-205ENST00000456754 NUP88Q99567 741 aaPredicted RBP16.59■□□□□ 0.25
TIMP1-205ENST00000456754 KIAA1683Q9H0B3 1180 aa16.59■□□□□ 0.25
TIMP1-205ENST00000456754 NYAP2Q9P242 653 aa16.59■□□□□ 0.25
TIMP1-205ENST00000456754 STX8Q9UNK0 236 aa16.59■□□□□ 0.25
TIMP1-205ENST00000456754 MTMR7Q9Y216 660 aa16.59■□□□□ 0.25
TIMP1-205ENST00000456754 TMX2Q9Y320 296 aa16.59■□□□□ 0.25
TIMP1-205ENST00000456754 PEX10O60683 326 aa16.58■□□□□ 0.24
TIMP1-205ENST00000456754 TTLL1O95922 423 aa16.58■□□□□ 0.24
TIMP1-205ENST00000456754 NOVP48745 357 aa16.58■□□□□ 0.24
TIMP1-205ENST00000456754 USP17L2Q6R6M4 530 aa16.58■□□□□ 0.24
TIMP1-205ENST00000456754 RALYLQ86SE5 291 aaKnown RBP16.58■□□□□ 0.24
TIMP1-205ENST00000456754 ENAHQ8N8S7 591 aaPredicted RBP16.58■□□□□ 0.24
TIMP1-205ENST00000456754 JAKMIP1Q96N16 626 aaKnown RBP16.58■□□□□ 0.24
TIMP1-205ENST00000456754 ZSCAN10Q96SZ4 725 aaPredicted RBP16.58■□□□□ 0.24
TIMP1-205ENST00000456754 TMEM47Q9BQJ4 181 aa16.58■□□□□ 0.24
TIMP1-205ENST00000456754 CNNM2Q9H8M5 875 aa16.58■□□□□ 0.24
TIMP1-205ENST00000456754 ARHGEF10LQ9HCE6 1279 aa16.58■□□□□ 0.24
TIMP1-205ENST00000456754 TCP11L1Q9NUJ3 509 aa16.58■□□□□ 0.24
TIMP1-205ENST00000456754 TNKSO95271 1327 aa16.57■□□□□ 0.24
TIMP1-205ENST00000456754 CYP2C8P10632 490 aa16.57■□□□□ 0.24
TIMP1-205ENST00000456754 VCAM1P19320 739 aa16.57■□□□□ 0.24
TIMP1-205ENST00000456754 SREBF2Q12772 1141 aa16.57■□□□□ 0.24
TIMP1-205ENST00000456754 TRDNQ13061 729 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms