RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 EIF3CLB5ME19 914 aaKnown RBP21.44■■□□□ 1.02
SEMA3B-208ENST00000456210 ICE2Q659A1 982 aa21.44■■□□□ 1.02
SEMA3B-208ENST00000456210 WWC2Q6AWC2 1192 aa21.44■■□□□ 1.02
SEMA3B-208ENST00000456210 TMTC1Q8IUR5 882 aa21.44■■□□□ 1.02
SEMA3B-208ENST00000456210 GRAMD1CQ8IYS0 662 aa21.44■■□□□ 1.02
SEMA3B-208ENST00000456210 EIF3CQ99613 913 aaKnown RBP21.44■■□□□ 1.02
SEMA3B-208ENST00000456210 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.44■■□□□ 1.02
SEMA3B-208ENST00000456210 SEC31BQ9NQW1 1179 aa21.44■■□□□ 1.02
SEMA3B-208ENST00000456210 LRRIQ3A6PVS8 624 aaPredicted RBP21.43■■□□□ 1.02
SEMA3B-208ENST00000456210 GYPCP04921 128 aa21.43■■□□□ 1.02
SEMA3B-208ENST00000456210 IL2RBP14784 551 aa21.43■■□□□ 1.02
SEMA3B-208ENST00000456210 SAFBQ15424 915 aaKnown RBP eCLIP21.43■■□□□ 1.02
SEMA3B-208ENST00000456210 CCDC102AQ96A19 550 aa21.43■■□□□ 1.02
SEMA3B-208ENST00000456210 TIAM2Q8IVF5 1701 aa21.43■■□□□ 1.02
SEMA3B-208ENST00000456210 BTBD18B2RXH4 712 aa21.43■■□□□ 1.02
SEMA3B-208ENST00000456210 IFNAR1P17181 557 aa21.43■■□□□ 1.02
SEMA3B-208ENST00000456210 LIFRP42702 1097 aa21.43■■□□□ 1.02
SEMA3B-208ENST00000456210 TTC31Q49AM3 519 aaPredicted RBP21.43■■□□□ 1.02
SEMA3B-208ENST00000456210 FILIP1LQ4L180 1135 aa21.43■■□□□ 1.02
SEMA3B-208ENST00000456210 CDC5LQ99459 802 aaKnown RBP21.43■■□□□ 1.02
SEMA3B-208ENST00000456210 SLC26A6Q9BXS9 759 aa21.43■■□□□ 1.02
SEMA3B-208ENST00000456210 TBC1D2BQ9UPU7 963 aa21.43■■□□□ 1.02
SEMA3B-208ENST00000456210 NBPF26B4DH59 902 aa21.42■■□□□ 1.02
SEMA3B-208ENST00000456210 CASP14P31944 242 aa21.42■■□□□ 1.02
SEMA3B-208ENST00000456210 ADD2P35612 726 aa21.42■■□□□ 1.02
SEMA3B-208ENST00000456210 ARHGAP25P42331 645 aa21.42■■□□□ 1.02
SEMA3B-208ENST00000456210 NBPF14Q5TI25 921 aa21.42■■□□□ 1.02
SEMA3B-208ENST00000456210 NBPF10Q6P3W6 841 aaKnown RBP21.42■■□□□ 1.02
SEMA3B-208ENST00000456210 DIS3L2Q8IYB7 885 aaKnown RBP21.42■■□□□ 1.02
SEMA3B-208ENST00000456210 NBPF15Q8N660 670 aa21.42■■□□□ 1.02
SEMA3B-208ENST00000456210 CTCFLQ8NI51 663 aaPredicted RBP21.42■■□□□ 1.02
SEMA3B-208ENST00000456210 UBR2Q8IWV8 1755 aa21.42■■□□□ 1.02
SEMA3B-208ENST00000456210 PPM1EQ8WY54 764 aa21.41■■□□□ 1.02
SEMA3B-208ENST00000456210 FAM204AQ9H8W3 233 aa21.41■■□□□ 1.02
SEMA3B-208ENST00000456210 BRMS1Q9HCU9 246 aa21.41■■□□□ 1.02
SEMA3B-208ENST00000456210 CEP131Q9UPN4 1083 aa21.41■■□□□ 1.02
SEMA3B-208ENST00000456210 B4E1Z4 1266 aa21.41■■□□□ 1.02
SEMA3B-208ENST00000456210 PPFIA4O75335 1185 aa21.41■■□□□ 1.02
SEMA3B-208ENST00000456210 FXR1P51114 621 aaKnown RBP eCLIP21.41■■□□□ 1.02
SEMA3B-208ENST00000456210 PACS2Q86VP3 889 aa21.41■■□□□ 1.02
SEMA3B-208ENST00000456210 NOA1Q8NC60 698 aaKnown RBP21.41■■□□□ 1.02
SEMA3B-208ENST00000456210 ACRBPQ8NEB7 543 aa21.41■■□□□ 1.02
SEMA3B-208ENST00000456210 CPLX3Q8WVH0 158 aa21.41■■□□□ 1.02
SEMA3B-208ENST00000456210 UBE2Q2LH0YL09 131 aa21.4■■□□□ 1.02
SEMA3B-208ENST00000456210 PRPF6O94906 941 aaKnown RBP21.4■■□□□ 1.02
SEMA3B-208ENST00000456210 CPP00450 1065 aa21.4■■□□□ 1.02
SEMA3B-208ENST00000456210 ERVK-24P63145 666 aa21.4■■□□□ 1.02
SEMA3B-208ENST00000456210 IRX3P78415 501 aaPredicted RBP21.4■■□□□ 1.02
SEMA3B-208ENST00000456210 NFXL1Q6ZNB6 911 aa21.4■■□□□ 1.02
SEMA3B-208ENST00000456210 SH3RF1Q7Z6J0 888 aa21.4■■□□□ 1.02
SEMA3B-208ENST00000456210 MYO6Q9UM54 1294 aa21.4■■□□□ 1.02
SEMA3B-208ENST00000456210 TFRCP02786 760 aaKnown RBP21.4■■□□□ 1.02
SEMA3B-208ENST00000456210 CD44P16070 742 aaKnown RBP21.4■■□□□ 1.02
SEMA3B-208ENST00000456210 MCM3P25205 808 aa21.4■■□□□ 1.02
SEMA3B-208ENST00000456210 TMEM67Q5HYA8 995 aa21.4■■□□□ 1.02
SEMA3B-208ENST00000456210 TTLL7Q6ZT98 887 aa21.4■■□□□ 1.02
SEMA3B-208ENST00000456210 ERVV-2B6SEH9 535 aa21.39■■□□□ 1.01
SEMA3B-208ENST00000456210 ABHD10Q9NUJ1 306 aa21.39■■□□□ 1.01
SEMA3B-208ENST00000456210 AATFQ9NY61 560 aaKnown RBP eCLIP21.39■■□□□ 1.01
SEMA3B-208ENST00000456210 RGS17Q9UGC6 210 aaPredicted RBP21.39■■□□□ 1.01
SEMA3B-208ENST00000456210 PCDHB6Q9Y5E3 794 aa21.39■■□□□ 1.01
SEMA3B-208ENST00000456210 RNF40O75150 1001 aa21.38■■□□□ 1.01
SEMA3B-208ENST00000456210 SYF2O95926 243 aaKnown RBP21.38■■□□□ 1.01
SEMA3B-208ENST00000456210 TRIM14Q14142 442 aa21.38■■□□□ 1.01
SEMA3B-208ENST00000456210 CCDC57Q2TAC2 916 aa21.38■■□□□ 1.01
SEMA3B-208ENST00000456210 CYP26C1Q6V0L0 522 aa21.38■■□□□ 1.01
SEMA3B-208ENST00000456210 CCDC148Q8NFR7 591 aa21.38■■□□□ 1.01
SEMA3B-208ENST00000456210 AFAP1L1Q8TED9 768 aa21.38■■□□□ 1.01
SEMA3B-208ENST00000456210 ZFP91Q96JP5 570 aaPredicted RBP21.38■■□□□ 1.01
SEMA3B-208ENST00000456210 MYL10Q9BUA6 226 aa21.38■■□□□ 1.01
SEMA3B-208ENST00000456210 CSRNP2Q9H175 543 aa21.38■■□□□ 1.01
SEMA3B-208ENST00000456210 QTRT2Q9H974 415 aaKnown RBP21.38■■□□□ 1.01
SEMA3B-208ENST00000456210 SLC12A7Q9Y666 1083 aa21.38■■□□□ 1.01
SEMA3B-208ENST00000456210 NKX1-1Q15270 411 aaPredicted RBP21.38■■□□□ 1.01
SEMA3B-208ENST00000456210 UBE3CQ15386 1083 aa21.38■■□□□ 1.01
SEMA3B-208ENST00000456210 PI16Q6UXB8 463 aa21.38■■□□□ 1.01
SEMA3B-208ENST00000456210 EFCAB13Q8IY85 973 aa21.38■■□□□ 1.01
SEMA3B-208ENST00000456210 GSDMAQ96QA5 445 aa21.38■■□□□ 1.01
SEMA3B-208ENST00000456210 RIC1Q4ADV7 1423 aa21.38■■□□□ 1.01
SEMA3B-208ENST00000456210 SPATA31A1Q5TZJ5 1347 aa21.37■■□□□ 1.01
SEMA3B-208ENST00000456210 ABL1P00519 1130 aa21.37■■□□□ 1.01
SEMA3B-208ENST00000456210 USP14P54578 494 aa21.37■■□□□ 1.01
SEMA3B-208ENST00000456210 ALX1Q15699 326 aa21.37■■□□□ 1.01
SEMA3B-208ENST00000456210 MAP9Q49MG5 647 aa21.37■■□□□ 1.01
SEMA3B-208ENST00000456210 USP49Q70CQ1 688 aa21.37■■□□□ 1.01
SEMA3B-208ENST00000456210 TRAPPC11Q7Z392 1133 aa21.37■■□□□ 1.01
SEMA3B-208ENST00000456210 ZNF512BQ96KM6 892 aaPredicted RBP21.37■■□□□ 1.01
SEMA3B-208ENST00000456210 LIMA1Q9UHB6 759 aaKnown RBP21.37■■□□□ 1.01
SEMA3B-208ENST00000456210 TAOK2Q9UL54 1235 aa21.37■■□□□ 1.01
SEMA3B-208ENST00000456210 MYH6P13533 1939 aa21.37■■□□□ 1.01
SEMA3B-208ENST00000456210 SPATA31A5Q5VU36 1347 aa21.37■■□□□ 1.01
SEMA3B-208ENST00000456210 SPATA31A7Q8IWB4 1347 aa21.37■■□□□ 1.01
SEMA3B-208ENST00000456210 ZC3H4Q9UPT8 1303 aaKnown RBP21.37■■□□□ 1.01
SEMA3B-208ENST00000456210 LRRC10BA6NIK2 292 aa21.36■■□□□ 1.01
SEMA3B-208ENST00000456210 PPP1R3GB7ZBB8 358 aa21.36■■□□□ 1.01
SEMA3B-208ENST00000456210 PHACTR2O75167 634 aa21.36■■□□□ 1.01
SEMA3B-208ENST00000456210 GUCY1A2P33402 732 aa21.36■■□□□ 1.01
SEMA3B-208ENST00000456210 MCAMP43121 646 aa21.36■■□□□ 1.01
SEMA3B-208ENST00000456210 GTF2A1P52655 376 aaPredicted RBP21.36■■□□□ 1.01
SEMA3B-208ENST00000456210 FAM98CQ17RN3 349 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms