RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 CYP2D7A0A087X1C5 515 aa20.75■□□□□ 0.91
USP39-208ENST00000455732 ECM2O94769 699 aaPredicted RBP20.75■□□□□ 0.91
USP39-208ENST00000455732 PDE4AP27815 886 aa20.75■□□□□ 0.91
USP39-208ENST00000455732 PRMT2P55345 433 aa20.75■□□□□ 0.91
USP39-208ENST00000455732 PABPC4Q13310 644 aaKnown RBP eCLIP20.75■□□□□ 0.91
USP39-208ENST00000455732 SLC44A5Q8NCS7 719 aa20.75■□□□□ 0.91
USP39-208ENST00000455732 ASCC2Q9H1I8 757 aaPredicted RBP20.75■□□□□ 0.91
USP39-208ENST00000455732 CABP5Q9NP86 173 aa20.75■□□□□ 0.91
USP39-208ENST00000455732 HELLSQ9NRZ9 838 aa20.75■□□□□ 0.91
USP39-208ENST00000455732 SRRDQ9UH36 339 aa20.75■□□□□ 0.91
USP39-208ENST00000455732 TRIM6-TRIM34B2RNG4 842 aa20.74■□□□□ 0.91
USP39-208ENST00000455732 OSBPP22059 807 aa20.74■□□□□ 0.91
USP39-208ENST00000455732 HOXA7P31268 230 aaPredicted RBP20.74■□□□□ 0.91
USP39-208ENST00000455732 GUCY1A2P33402 732 aa20.74■□□□□ 0.91
USP39-208ENST00000455732 EMILIN3Q9NT22 766 aa20.74■□□□□ 0.91
USP39-208ENST00000455732 TMOD4Q9NZQ9 345 aa20.74■□□□□ 0.91
USP39-208ENST00000455732 BRCA2P51587 3418 aa20.74■□□□□ 0.91
USP39-208ENST00000455732 SMIM22K7EJ46 135 aa20.73■□□□□ 0.91
USP39-208ENST00000455732 FMNL1O95466 1100 aaPredicted RBP20.73■□□□□ 0.91
USP39-208ENST00000455732 TDO2P48775 406 aa20.73■□□□□ 0.91
USP39-208ENST00000455732 CDK8P49336 464 aa20.73■□□□□ 0.91
USP39-208ENST00000455732 RAB3GAP1Q15042 981 aa20.73■□□□□ 0.91
USP39-208ENST00000455732 FAM110CQ1W6H9 321 aa20.73■□□□□ 0.91
USP39-208ENST00000455732 TMEM179Q6ZVK1 233 aa20.73■□□□□ 0.91
USP39-208ENST00000455732 ANKRD13CQ8N6S4 541 aa20.73■□□□□ 0.91
USP39-208ENST00000455732 ZNF333Q96JL9 665 aa20.73■□□□□ 0.91
USP39-208ENST00000455732 CCDC17Q96LX7 622 aa20.73■□□□□ 0.91
USP39-208ENST00000455732 NACAP1Q9BZK3 213 aa20.73■□□□□ 0.91
USP39-208ENST00000455732 HOXD10P28358 340 aa20.72■□□□□ 0.91
USP39-208ENST00000455732 GCLCP48506 637 aaPredicted RBP20.72■□□□□ 0.91
USP39-208ENST00000455732 FCGRTP55899 365 aa20.72■□□□□ 0.91
USP39-208ENST00000455732 SLC9C1Q4G0N8 1177 aa20.72■□□□□ 0.91
USP39-208ENST00000455732 PRPF38BQ5VTL8 546 aaKnown RBP20.72■□□□□ 0.91
USP39-208ENST00000455732 USP17L2Q6R6M4 530 aa20.72■□□□□ 0.91
USP39-208ENST00000455732 IFNL3Q8IZI9 196 aa20.72■□□□□ 0.91
USP39-208ENST00000455732 RILPL2Q969X0 211 aa20.72■□□□□ 0.91
USP39-208ENST00000455732 C12orf42Q96LP6 360 aa20.72■□□□□ 0.91
USP39-208ENST00000455732 A0A0D9SFI3 127 aa20.71■□□□□ 0.91
USP39-208ENST00000455732 FOXP2O15409 715 aa20.71■□□□□ 0.91
USP39-208ENST00000455732 APPP05067 770 aa20.71■□□□□ 0.91
USP39-208ENST00000455732 USP14P54578 494 aa20.71■□□□□ 0.91
USP39-208ENST00000455732 SEPT2Q15019 361 aa20.71■□□□□ 0.91
USP39-208ENST00000455732 MCMDC2Q4G0Z9 681 aa20.71■□□□□ 0.91
USP39-208ENST00000455732 ACER1Q8TDN7 264 aa20.71■□□□□ 0.91
USP39-208ENST00000455732 FAM227BQ96M60 508 aa20.71■□□□□ 0.91
USP39-208ENST00000455732 KIAA1683Q9H0B3 1180 aa20.71■□□□□ 0.91
USP39-208ENST00000455732 MYPNQ86TC9 1320 aa20.71■□□□□ 0.91
USP39-208ENST00000455732 MPHOSPH10O00566 681 aaKnown RBP20.7■□□□□ 0.9
USP39-208ENST00000455732 IRX3P78415 501 aaPredicted RBP20.7■□□□□ 0.9
USP39-208ENST00000455732 CCDC129Q6ZRS4 1044 aa20.7■□□□□ 0.9
USP39-208ENST00000455732 NBPF11Q86T75 865 aa20.7■□□□□ 0.9
USP39-208ENST00000455732 P2RX7Q99572 595 aaKnown RBP20.7■□□□□ 0.9
USP39-208ENST00000455732 GREB1LQ9C091 1923 aaPredicted RBP20.7■□□□□ 0.9
USP39-208ENST00000455732 PLXNB2O15031 1838 aa20.69■□□□□ 0.9
USP39-208ENST00000455732 POTEFA5A3E0 1075 aa20.69■□□□□ 0.9
USP39-208ENST00000455732 AKR1B1P15121 316 aa20.69■□□□□ 0.9
USP39-208ENST00000455732 SDSP20132 328 aa20.69■□□□□ 0.9
USP39-208ENST00000455732 PRKCZQ05513 592 aa20.69■□□□□ 0.9
USP39-208ENST00000455732 NMIQ13287 307 aaPredicted RBP20.69■□□□□ 0.9
USP39-208ENST00000455732 TTC22Q5TAA0 569 aa20.69■□□□□ 0.9
USP39-208ENST00000455732 SH3TC2Q8TF17 1288 aa20.69■□□□□ 0.9
USP39-208ENST00000455732 FEZ1Q99689 392 aa20.69■□□□□ 0.9
USP39-208ENST00000455732 NAPBQ9H115 298 aa20.69■□□□□ 0.9
USP39-208ENST00000455732 MORF4L1Q9UBU8 362 aa20.69■□□□□ 0.9
USP39-208ENST00000455732 GABRQQ9UN88 632 aa20.69■□□□□ 0.9
USP39-208ENST00000455732 MKI67P46013 3256 aaKnown RBP20.69■□□□□ 0.9
USP39-208ENST00000455732 RLFQ13129 1914 aa20.68■□□□□ 0.9
USP39-208ENST00000455732 MINDY4BA8MYZ0 360 aa20.68■□□□□ 0.9
USP39-208ENST00000455732 HIP1O00291 1037 aa20.68■□□□□ 0.9
USP39-208ENST00000455732 HERVK_113P62684 666 aa20.68■□□□□ 0.9
USP39-208ENST00000455732 ZYXQ15942 572 aaKnown RBP20.68■□□□□ 0.9
USP39-208ENST00000455732 ZNF287Q9HBT7 754 aa20.68■□□□□ 0.9
USP39-208ENST00000455732 PARP14Q460N5 1801 aa20.67■□□□□ 0.9
USP39-208ENST00000455732 A0A1W2PRG0 241 aa20.67■□□□□ 0.9
USP39-208ENST00000455732 TNPO2O14787 897 aaKnown RBP20.67■□□□□ 0.9
USP39-208ENST00000455732 GSPT1P15170 499 aaKnown RBP20.67■□□□□ 0.9
USP39-208ENST00000455732 RASA1P20936 1047 aa20.67■□□□□ 0.9
USP39-208ENST00000455732 ICA1Q05084 483 aa20.67■□□□□ 0.9
USP39-208ENST00000455732 ALX1Q15699 326 aa20.67■□□□□ 0.9
USP39-208ENST00000455732 POTEEQ6S8J3 1075 aa20.67■□□□□ 0.9
USP39-208ENST00000455732 ZNF589Q86UQ0 364 aaPredicted RBP20.67■□□□□ 0.9
USP39-208ENST00000455732 RAET1EQ8TD07 263 aa20.67■□□□□ 0.9
USP39-208ENST00000455732 ZMYM6O95789 1325 aa20.67■□□□□ 0.9
USP39-208ENST00000455732 CCDC171Q6TFL3 1326 aa20.67■□□□□ 0.9
USP39-208ENST00000455732 VCAM1P19320 739 aa20.66■□□□□ 0.9
USP39-208ENST00000455732 GRK4P32298 578 aa20.66■□□□□ 0.9
USP39-208ENST00000455732 PPARAQ07869 468 aa20.66■□□□□ 0.9
USP39-208ENST00000455732 VPS53Q5VIR6 699 aa20.66■□□□□ 0.9
USP39-208ENST00000455732 CENPQQ7L2Z9 268 aaPredicted RBP20.66■□□□□ 0.9
USP39-208ENST00000455732 SH2D4AQ9H788 454 aa20.66■□□□□ 0.9
USP39-208ENST00000455732 TXNRD2Q9NNW7 524 aa20.66■□□□□ 0.9
USP39-208ENST00000455732 SLC3A2P08195 630 aaKnown RBP20.65■□□□□ 0.9
USP39-208ENST00000455732 FLT3LGP49771 235 aa20.65■□□□□ 0.9
USP39-208ENST00000455732 MFAP1P55081 439 aaKnown RBP20.65■□□□□ 0.9
USP39-208ENST00000455732 CATSPERGQ6ZRH7 1159 aa20.65■□□□□ 0.9
USP39-208ENST00000455732 SIAH1Q8IUQ4 282 aa20.65■□□□□ 0.9
USP39-208ENST00000455732 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.65■□□□□ 0.9
USP39-208ENST00000455732 KANSL2Q9H9L4 492 aa20.65■□□□□ 0.9
USP39-208ENST00000455732 MKNK2Q9HBH9 465 aa20.65■□□□□ 0.9
USP39-208ENST00000455732 DIAPH3Q9NSV4 1193 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms