RNA–Protein interactions for RNA: ENST00000454444.1

AC007879.2-201, humanhuman

TSL 4 BASIC

Gene AC007879.2, Length 551 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.2-201ENST00000454444 DNAJC18Q9H819 358 aa9.5□□□□□ -0.89
AC007879.2-201ENST00000454444 PRKAG2Q9UGJ0 569 aa9.5□□□□□ -0.89
AC007879.2-201ENST00000454444 DOCK1Q14185 1865 aa9.5□□□□□ -0.89
AC007879.2-201ENST00000454444 MKI67P46013 3256 aaKnown RBP9.5□□□□□ -0.89
AC007879.2-201ENST00000454444 APBB1O00213 710 aa9.49□□□□□ -0.89
AC007879.2-201ENST00000454444 HMMRO75330 724 aa9.49□□□□□ -0.89
AC007879.2-201ENST00000454444 IFIT2P09913 472 aaKnown RBP9.49□□□□□ -0.89
AC007879.2-201ENST00000454444 BMP8BP34820 402 aa9.49□□□□□ -0.89
AC007879.2-201ENST00000454444 JAG1P78504 1218 aa9.49□□□□□ -0.89
AC007879.2-201ENST00000454444 SHROOM1Q2M3G4 852 aaPredicted RBP9.49□□□□□ -0.89
AC007879.2-201ENST00000454444 SLC9C2Q5TAH2 1124 aa9.49□□□□□ -0.89
AC007879.2-201ENST00000454444 TATDN1Q6P1N9 297 aa9.49□□□□□ -0.89
AC007879.2-201ENST00000454444 CATSPERGQ6ZRH7 1159 aa9.49□□□□□ -0.89
AC007879.2-201ENST00000454444 DPP9Q86TI2 863 aa9.49□□□□□ -0.89
AC007879.2-201ENST00000454444 DDRGK1Q96HY6 314 aa9.49□□□□□ -0.89
AC007879.2-201ENST00000454444 LBHD1Q9BQE6 289 aaPredicted RBP9.49□□□□□ -0.89
AC007879.2-201ENST00000454444 KIAA1683Q9H0B3 1180 aa9.49□□□□□ -0.89
AC007879.2-201ENST00000454444 PORCNQ9H237 461 aa9.49□□□□□ -0.89
AC007879.2-201ENST00000454444 PRO3102Q9H379 93 aa9.49□□□□□ -0.89
AC007879.2-201ENST00000454444 MCM9Q9NXL9 1143 aa9.49□□□□□ -0.89
AC007879.2-201ENST00000454444 SLC5A4Q9NY91 659 aa9.49□□□□□ -0.89
AC007879.2-201ENST00000454444 HOXC10Q9NYD6 342 aa9.49□□□□□ -0.89
AC007879.2-201ENST00000454444 TLR7Q9NYK1 1049 aaKnown RBP9.49□□□□□ -0.89
AC007879.2-201ENST00000454444 EXOC6BQ9Y2D4 811 aa9.49□□□□□ -0.89
AC007879.2-201ENST00000454444 NDUFB9Q9Y6M9 179 aa9.49□□□□□ -0.89
AC007879.2-201ENST00000454444 SLC15A5A6NIM6 579 aa9.48□□□□□ -0.89
AC007879.2-201ENST00000454444 MSCO60682 206 aa9.48□□□□□ -0.89
AC007879.2-201ENST00000454444 VCAM1P19320 739 aa9.48□□□□□ -0.89
AC007879.2-201ENST00000454444 CCND3P30281 292 aaPredicted RBP9.48□□□□□ -0.89
AC007879.2-201ENST00000454444 MAGEA10P43363 369 aaPredicted RBP9.48□□□□□ -0.89
AC007879.2-201ENST00000454444 CCL14Q16627 93 aa9.48□□□□□ -0.89
AC007879.2-201ENST00000454444 MORN1Q5T089 497 aa9.48□□□□□ -0.89
AC007879.2-201ENST00000454444 MAP3K21Q5TCX8 1036 aa9.48□□□□□ -0.89
AC007879.2-201ENST00000454444 TDHQ8IZJ6 230 aa9.48□□□□□ -0.89
AC007879.2-201ENST00000454444 LRCH3Q96II8 777 aa9.48□□□□□ -0.89
AC007879.2-201ENST00000454444 C12orf42Q96LP6 360 aa9.48□□□□□ -0.89
AC007879.2-201ENST00000454444 DNAJC2Q99543 621 aaKnown RBP9.48□□□□□ -0.89
AC007879.2-201ENST00000454444 TANGO6Q9C0B7 1094 aa9.48□□□□□ -0.89
AC007879.2-201ENST00000454444 CHMP4BQ9H444 224 aaKnown RBP9.48□□□□□ -0.89
AC007879.2-201ENST00000454444 RPAP3Q9H6T3 665 aaPredicted RBP9.48□□□□□ -0.89
AC007879.2-201ENST00000454444 ANTXR1Q9H6X2 564 aa9.48□□□□□ -0.89
AC007879.2-201ENST00000454444 MYCNP04198 464 aaPredicted RBP9.47□□□□□ -0.89
AC007879.2-201ENST00000454444 PTPREP23469 700 aa9.47□□□□□ -0.89
AC007879.2-201ENST00000454444 PLS1Q14651 629 aa9.47□□□□□ -0.89
AC007879.2-201ENST00000454444 COG2Q14746 738 aa9.47□□□□□ -0.89
AC007879.2-201ENST00000454444 CEP85Q6P2H3 762 aa9.47□□□□□ -0.89
AC007879.2-201ENST00000454444 SAMD1Q6SPF0 538 aaPredicted RBP9.47□□□□□ -0.89
AC007879.2-201ENST00000454444 DEFB123Q8N688 67 aa9.47□□□□□ -0.89
AC007879.2-201ENST00000454444 RHPN1Q8TCX5 695 aa9.47□□□□□ -0.89
AC007879.2-201ENST00000454444 ACER1Q8TDN7 264 aa9.47□□□□□ -0.89
AC007879.2-201ENST00000454444 GDF15Q99988 308 aa9.47□□□□□ -0.89
AC007879.2-201ENST00000454444 SENP6Q9GZR1 1112 aaPredicted RBP9.47□□□□□ -0.89
AC007879.2-201ENST00000454444 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.47□□□□□ -0.89
AC007879.2-201ENST00000454444 SH2D4AQ9H788 454 aa9.47□□□□□ -0.89
AC007879.2-201ENST00000454444 IL1RAPL2Q9NP60 686 aa9.47□□□□□ -0.89
AC007879.2-201ENST00000454444 BRCA2P51587 3418 aa9.47□□□□□ -0.89
AC007879.2-201ENST00000454444 MGAMO43451 1857 aa9.47□□□□□ -0.89
AC007879.2-201ENST00000454444 GOLIM4O00461 696 aa9.46□□□□□ -0.9
AC007879.2-201ENST00000454444 DLL1O00548 723 aa9.46□□□□□ -0.9
AC007879.2-201ENST00000454444 SOX1O00570 391 aaPredicted RBP9.46□□□□□ -0.9
AC007879.2-201ENST00000454444 STRNO43815 780 aa9.46□□□□□ -0.9
AC007879.2-201ENST00000454444 RLBP1P12271 317 aa9.46□□□□□ -0.9
AC007879.2-201ENST00000454444 PLCD1P51178 756 aa9.46□□□□□ -0.9
AC007879.2-201ENST00000454444 SEPT2Q15019 361 aa9.46□□□□□ -0.9
AC007879.2-201ENST00000454444 GPR153Q6NV75 609 aa9.46□□□□□ -0.9
AC007879.2-201ENST00000454444 ARRDC4Q8NCT1 418 aa9.46□□□□□ -0.9
AC007879.2-201ENST00000454444 PANK1Q8TE04 598 aa9.46□□□□□ -0.9
AC007879.2-201ENST00000454444 USP6NLQ92738 828 aa9.46□□□□□ -0.9
AC007879.2-201ENST00000454444 KIF1BPQ96EK5 621 aa9.46□□□□□ -0.9
AC007879.2-201ENST00000454444 ARHGEF10LQ9HCE6 1279 aa9.46□□□□□ -0.9
AC007879.2-201ENST00000454444 SWAP70Q9UH65 585 aa9.46□□□□□ -0.9
AC007879.2-201ENST00000454444 DDX20Q9UHI6 824 aaKnown RBP9.46□□□□□ -0.9
AC007879.2-201ENST00000454444 SPDYE16A6NNV3 312 aaPredicted RBP9.45□□□□□ -0.9
AC007879.2-201ENST00000454444 KBTBD13C9JR72 458 aa9.45□□□□□ -0.9
AC007879.2-201ENST00000454444 RAD21O60216 631 aa9.45□□□□□ -0.9
AC007879.2-201ENST00000454444 FLOT1O75955 427 aa9.45□□□□□ -0.9
AC007879.2-201ENST00000454444 PDE6AP16499 860 aa9.45□□□□□ -0.9
AC007879.2-201ENST00000454444 SHMT1P34896 483 aa9.45□□□□□ -0.9
AC007879.2-201ENST00000454444 MNX1P50219 401 aaPredicted RBP9.45□□□□□ -0.9
AC007879.2-201ENST00000454444 ATN1P54259 1190 aaPredicted RBP9.45□□□□□ -0.9
AC007879.2-201ENST00000454444 MDM2Q00987 491 aaPredicted RBP9.45□□□□□ -0.9
AC007879.2-201ENST00000454444 LRIT3Q3SXY7 679 aa9.45□□□□□ -0.9
AC007879.2-201ENST00000454444 LHX8Q68G74 356 aa9.45□□□□□ -0.9
AC007879.2-201ENST00000454444 LBX2Q6XYB7 198 aa9.45□□□□□ -0.9
AC007879.2-201ENST00000454444 TMEM179Q6ZVK1 233 aa9.45□□□□□ -0.9
AC007879.2-201ENST00000454444 NCAPG2Q86XI2 1143 aa9.45□□□□□ -0.9
AC007879.2-201ENST00000454444 RPAP2Q8IXW5 612 aaPredicted RBP9.45□□□□□ -0.9
AC007879.2-201ENST00000454444 MB21D1Q8N884 522 aa9.45□□□□□ -0.9
AC007879.2-201ENST00000454444 LPAR1Q92633 364 aa9.45□□□□□ -0.9
AC007879.2-201ENST00000454444 RIOK1Q9BRS2 568 aaKnown RBP9.45□□□□□ -0.9
AC007879.2-201ENST00000454444 ZNF532Q9HCE3 1301 aa9.45□□□□□ -0.9
AC007879.2-201ENST00000454444 RAB11FIP3O75154 756 aa9.44□□□□□ -0.9
AC007879.2-201ENST00000454444 CNMDO75829 334 aa9.44□□□□□ -0.9
AC007879.2-201ENST00000454444 HOXC6P09630 235 aa9.44□□□□□ -0.9
AC007879.2-201ENST00000454444 COL6A1P12109 1028 aa9.44□□□□□ -0.9
AC007879.2-201ENST00000454444 ERCC3P19447 782 aa9.44□□□□□ -0.9
AC007879.2-201ENST00000454444 ADORA2AP29274 412 aa9.44□□□□□ -0.9
AC007879.2-201ENST00000454444 CYP2C19P33261 490 aa9.44□□□□□ -0.9
AC007879.2-201ENST00000454444 GRB14Q14449 540 aa9.44□□□□□ -0.9
AC007879.2-201ENST00000454444 LRRC26Q2I0M4 334 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms