RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 LRRFIP1Q32MZ4 808 aaKnown RBP17.49■□□□□ 0.39
HSPG2-207ENST00000453796 ZMYM1Q5SVZ6 1142 aa17.49■□□□□ 0.39
HSPG2-207ENST00000453796 USP17L2Q6R6M4 530 aa17.49■□□□□ 0.39
HSPG2-207ENST00000453796 ANKRD13CQ8N6S4 541 aa17.49■□□□□ 0.39
HSPG2-207ENST00000453796 ACER1Q8TDN7 264 aa17.49■□□□□ 0.39
HSPG2-207ENST00000453796 FSD1Q9BTV5 496 aa17.49■□□□□ 0.39
HSPG2-207ENST00000453796 KIAA1683Q9H0B3 1180 aa17.49■□□□□ 0.39
HSPG2-207ENST00000453796 ARPP21Q9UBL0 812 aaPredicted RBP17.49■□□□□ 0.39
HSPG2-207ENST00000453796 KIAA0100Q14667 2235 aaKnown RBP17.48■□□□□ 0.39
HSPG2-207ENST00000453796 ECM2O94769 699 aaPredicted RBP17.48■□□□□ 0.39
HSPG2-207ENST00000453796 GCLCP48506 637 aaPredicted RBP17.48■□□□□ 0.39
HSPG2-207ENST00000453796 NUCB1Q02818 461 aa17.48■□□□□ 0.39
HSPG2-207ENST00000453796 DDRGK1Q96HY6 314 aa17.48■□□□□ 0.39
HSPG2-207ENST00000453796 PARP14Q460N5 1801 aa17.48■□□□□ 0.39
HSPG2-207ENST00000453796 ROBO3Q96MS0 1386 aa17.48■□□□□ 0.39
HSPG2-207ENST00000453796 A0A1W2PRG0 241 aa17.47■□□□□ 0.39
HSPG2-207ENST00000453796 FMNL1O95466 1100 aaPredicted RBP17.47■□□□□ 0.39
HSPG2-207ENST00000453796 AKR1B1P15121 316 aa17.47■□□□□ 0.39
HSPG2-207ENST00000453796 GNAT2P19087 354 aa17.47■□□□□ 0.39
HSPG2-207ENST00000453796 USP14P54578 494 aa17.47■□□□□ 0.39
HSPG2-207ENST00000453796 FCGRTP55899 365 aa17.47■□□□□ 0.39
HSPG2-207ENST00000453796 ZYXQ15942 572 aaKnown RBP17.47■□□□□ 0.39
HSPG2-207ENST00000453796 B4GALNT3Q6L9W6 998 aa17.47■□□□□ 0.39
HSPG2-207ENST00000453796 TMEM179Q6ZVK1 233 aa17.47■□□□□ 0.39
HSPG2-207ENST00000453796 CHD1LQ86WJ1 897 aa17.47■□□□□ 0.39
HSPG2-207ENST00000453796 AMOTL1Q8IY63 956 aa17.47■□□□□ 0.39
HSPG2-207ENST00000453796 EVI5LQ96CN4 794 aa17.47■□□□□ 0.39
HSPG2-207ENST00000453796 ZNF333Q96JL9 665 aa17.47■□□□□ 0.39
HSPG2-207ENST00000453796 CCDC17Q96LX7 622 aa17.47■□□□□ 0.39
HSPG2-207ENST00000453796 P2RX7Q99572 595 aaKnown RBP17.47■□□□□ 0.39
HSPG2-207ENST00000453796 MORF4L1Q9UBU8 362 aa17.47■□□□□ 0.39
HSPG2-207ENST00000453796 TNRC18O15417 2968 aaPredicted RBP17.47■□□□□ 0.39
HSPG2-207ENST00000453796 HOXD10P28358 340 aa17.46■□□□□ 0.39
HSPG2-207ENST00000453796 HERVK_113P62684 666 aa17.46■□□□□ 0.39
HSPG2-207ENST00000453796 IRX3P78415 501 aaPredicted RBP17.46■□□□□ 0.39
HSPG2-207ENST00000453796 SLC9C1Q4G0N8 1177 aa17.46■□□□□ 0.39
HSPG2-207ENST00000453796 POTEEQ6S8J3 1075 aa17.46■□□□□ 0.39
HSPG2-207ENST00000453796 SIAH1Q8IUQ4 282 aa17.46■□□□□ 0.39
HSPG2-207ENST00000453796 FEZ1Q99689 392 aa17.46■□□□□ 0.39
HSPG2-207ENST00000453796 GABRQQ9UN88 632 aa17.46■□□□□ 0.39
HSPG2-207ENST00000453796 MYPNQ86TC9 1320 aa17.46■□□□□ 0.38
HSPG2-207ENST00000453796 PATL2C9JE40 543 aaKnown RBP17.45■□□□□ 0.38
HSPG2-207ENST00000453796 MPHOSPH10O00566 681 aaKnown RBP17.45■□□□□ 0.38
HSPG2-207ENST00000453796 VCAM1P19320 739 aa17.45■□□□□ 0.38
HSPG2-207ENST00000453796 MLLT1Q03111 559 aaPredicted RBP17.45■□□□□ 0.38
HSPG2-207ENST00000453796 PRKCZQ05513 592 aa17.45■□□□□ 0.38
HSPG2-207ENST00000453796 PLEKHM2Q8IWE5 1019 aa17.45■□□□□ 0.38
HSPG2-207ENST00000453796 OSBPL3Q9H4L5 887 aa17.45■□□□□ 0.38
HSPG2-207ENST00000453796 MYH4Q9Y623 1939 aa17.45■□□□□ 0.38
HSPG2-207ENST00000453796 A0A0G2JMZ2 1700 aa17.44■□□□□ 0.38
HSPG2-207ENST00000453796 FOXP2O15409 715 aa17.44■□□□□ 0.38
HSPG2-207ENST00000453796 IRX6P78412 446 aaPredicted RBP17.44■□□□□ 0.38
HSPG2-207ENST00000453796 CATSPERGQ6ZRH7 1159 aa17.44■□□□□ 0.38
HSPG2-207ENST00000453796 TICAM2Q86XR7 235 aa17.44■□□□□ 0.38
HSPG2-207ENST00000453796 CLEC10AQ8IUN9 316 aa17.44■□□□□ 0.38
HSPG2-207ENST00000453796 IFNL3Q8IZI9 196 aa17.44■□□□□ 0.38
HSPG2-207ENST00000453796 SH3TC2Q8TF17 1288 aa17.44■□□□□ 0.38
HSPG2-207ENST00000453796 TXNRD2Q9NNW7 524 aa17.44■□□□□ 0.38
HSPG2-207ENST00000453796 RBPJLQ9UBG7 517 aa17.44■□□□□ 0.38
HSPG2-207ENST00000453796 MKI67P46013 3256 aaKnown RBP17.44■□□□□ 0.38
HSPG2-207ENST00000453796 POTEFA5A3E0 1075 aa17.43■□□□□ 0.38
HSPG2-207ENST00000453796 USP17L15C9J2P7 530 aa17.43■□□□□ 0.38
HSPG2-207ENST00000453796 USP17L13C9JLJ4 530 aa17.43■□□□□ 0.38
HSPG2-207ENST00000453796 USP17L11C9JVI0 530 aa17.43■□□□□ 0.38
HSPG2-207ENST00000453796 USP17L18D6R9N7 530 aa17.43■□□□□ 0.38
HSPG2-207ENST00000453796 USP17L22D6RA61 530 aa17.43■□□□□ 0.38
HSPG2-207ENST00000453796 USP17L17D6RBQ6 530 aa17.43■□□□□ 0.38
HSPG2-207ENST00000453796 USP17L19D6RCP7 530 aa17.43■□□□□ 0.38
HSPG2-207ENST00000453796 USP17L20D6RJB6 530 aa17.43■□□□□ 0.38
HSPG2-207ENST00000453796 PEX10O60683 326 aa17.43■□□□□ 0.38
HSPG2-207ENST00000453796 RASA1P20936 1047 aa17.43■□□□□ 0.38
HSPG2-207ENST00000453796 USP17L24Q0WX57 530 aa17.43■□□□□ 0.38
HSPG2-207ENST00000453796 KIAA1755Q5JYT7 1200 aa17.43■□□□□ 0.38
HSPG2-207ENST00000453796 NBPF11Q86T75 865 aa17.43■□□□□ 0.38
HSPG2-207ENST00000453796 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.43■□□□□ 0.38
HSPG2-207ENST00000453796 TNPO2O14787 897 aaKnown RBP17.42■□□□□ 0.38
HSPG2-207ENST00000453796 TDO2P48775 406 aa17.42■□□□□ 0.38
HSPG2-207ENST00000453796 ICA1Q05084 483 aa17.42■□□□□ 0.38
HSPG2-207ENST00000453796 LBX2Q6XYB7 198 aa17.42■□□□□ 0.38
HSPG2-207ENST00000453796 CCDC129Q6ZRS4 1044 aa17.42■□□□□ 0.38
HSPG2-207ENST00000453796 RAET1EQ8TD07 263 aa17.42■□□□□ 0.38
HSPG2-207ENST00000453796 GTF3C2Q8WUA4 911 aaPredicted RBP17.42■□□□□ 0.38
HSPG2-207ENST00000453796 TMX2Q9Y320 296 aa17.42■□□□□ 0.38
HSPG2-207ENST00000453796 MINDY4BA8MYZ0 360 aa17.41■□□□□ 0.38
HSPG2-207ENST00000453796 CNMDO75829 334 aa17.41■□□□□ 0.38
HSPG2-207ENST00000453796 APPP05067 770 aa17.41■□□□□ 0.38
HSPG2-207ENST00000453796 GRK4P32298 578 aa17.41■□□□□ 0.38
HSPG2-207ENST00000453796 FLT3LGP49771 235 aa17.41■□□□□ 0.38
HSPG2-207ENST00000453796 IRF5Q13568 498 aa17.41■□□□□ 0.38
HSPG2-207ENST00000453796 Q3C1V9 767 aa17.41■□□□□ 0.38
HSPG2-207ENST00000453796 RPAP3Q9H6T3 665 aaPredicted RBP17.41■□□□□ 0.38
HSPG2-207ENST00000453796 HELLSQ9NRZ9 838 aa17.41■□□□□ 0.38
HSPG2-207ENST00000453796 COL11A1P12107 1806 aaPredicted RBP17.41■□□□□ 0.38
HSPG2-207ENST00000453796 A0A0D9SFI3 127 aa17.4■□□□□ 0.38
HSPG2-207ENST00000453796 ERVK-9P63128 1117 aa17.4■□□□□ 0.38
HSPG2-207ENST00000453796 ERVK-24P63145 666 aa17.4■□□□□ 0.38
HSPG2-207ENST00000453796 SLAIN1Q8ND83 568 aa17.4■□□□□ 0.38
HSPG2-207ENST00000453796 GPRC5AQ8NFJ5 357 aa17.4■□□□□ 0.38
HSPG2-207ENST00000453796 COA7Q96BR5 231 aa17.4■□□□□ 0.38
HSPG2-207ENST00000453796 FAM227BQ96M60 508 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms