RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 SALL3Q9BXA9 1300 aa16.99■□□□□ 0.31
RFTN1-207ENST00000453536 USP17L12C9JPN9 530 aa16.99■□□□□ 0.31
RFTN1-207ENST00000453536 USP17L21D6R901 530 aa16.99■□□□□ 0.31
RFTN1-207ENST00000453536 ADCY3O60266 1144 aa16.99■□□□□ 0.31
RFTN1-207ENST00000453536 CCL5P13501 91 aa16.99■□□□□ 0.31
RFTN1-207ENST00000453536 VCAM1P19320 739 aa16.99■□□□□ 0.31
RFTN1-207ENST00000453536 IRX3P78415 501 aaPredicted RBP16.99■□□□□ 0.31
RFTN1-207ENST00000453536 UBE3CQ15386 1083 aa16.99■□□□□ 0.31
RFTN1-207ENST00000453536 PNMA3Q9UL41 463 aa16.99■□□□□ 0.31
RFTN1-207ENST00000453536 MYH4Q9Y623 1939 aa16.99■□□□□ 0.31
RFTN1-207ENST00000453536 IGSF3O75054 1194 aa16.98■□□□□ 0.31
RFTN1-207ENST00000453536 INHAP05111 366 aa16.98■□□□□ 0.31
RFTN1-207ENST00000453536 CTR9Q6PD62 1173 aa16.98■□□□□ 0.31
RFTN1-207ENST00000453536 BIN2Q9UBW5 565 aaPredicted RBP16.98■□□□□ 0.31
RFTN1-207ENST00000453536 FRMPD3Q5JV73 1810 aa16.98■□□□□ 0.31
RFTN1-207ENST00000453536 GSG1L2A8MUP6 293 aa16.97■□□□□ 0.31
RFTN1-207ENST00000453536 HOXA7P31268 230 aaPredicted RBP16.97■□□□□ 0.31
RFTN1-207ENST00000453536 ARHGEF6Q15052 776 aa16.97■□□□□ 0.31
RFTN1-207ENST00000453536 C12orf60Q5U649 245 aa16.97■□□□□ 0.31
RFTN1-207ENST00000453536 USP17L2Q6R6M4 530 aa16.97■□□□□ 0.31
RFTN1-207ENST00000453536 CCDC129Q6ZRS4 1044 aa16.97■□□□□ 0.31
RFTN1-207ENST00000453536 KBTBD3Q8NAB2 608 aa16.97■□□□□ 0.31
RFTN1-207ENST00000453536 EXOC6Q8TAG9 804 aa16.97■□□□□ 0.31
RFTN1-207ENST00000453536 STRBPQ96SI9 672 aaKnown RBP16.97■□□□□ 0.31
RFTN1-207ENST00000453536 TMEM106CQ9BVX2 250 aa16.97■□□□□ 0.31
RFTN1-207ENST00000453536 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.97■□□□□ 0.31
RFTN1-207ENST00000453536 GJD2Q9UKL4 321 aa16.97■□□□□ 0.31
RFTN1-207ENST00000453536 C19orf81C9J6K1 198 aa16.96■□□□□ 0.31
RFTN1-207ENST00000453536 GNRH1P01148 92 aa16.96■□□□□ 0.31
RFTN1-207ENST00000453536 CDK8P49336 464 aa16.96■□□□□ 0.31
RFTN1-207ENST00000453536 NBPF11Q86T75 865 aa16.96■□□□□ 0.31
RFTN1-207ENST00000453536 CERS3Q8IU89 383 aa16.96■□□□□ 0.31
RFTN1-207ENST00000453536 SPICE1Q8N0Z3 855 aa16.96■□□□□ 0.31
RFTN1-207ENST00000453536 TBC1D2Q9BYX2 928 aa16.96■□□□□ 0.31
RFTN1-207ENST00000453536 RNF208Q9H0X6 261 aa16.96■□□□□ 0.31
RFTN1-207ENST00000453536 RPAP3Q9H6T3 665 aaPredicted RBP16.96■□□□□ 0.31
RFTN1-207ENST00000453536 BTBD7Q9P203 1132 aa16.96■□□□□ 0.31
RFTN1-207ENST00000453536 MORF4L1Q9UBU8 362 aa16.96■□□□□ 0.31
RFTN1-207ENST00000453536 CYP2B6P20813 491 aa16.95■□□□□ 0.3
RFTN1-207ENST00000453536 HOXD10P28358 340 aa16.95■□□□□ 0.3
RFTN1-207ENST00000453536 PRMT2P55345 433 aa16.95■□□□□ 0.3
RFTN1-207ENST00000453536 IRX6P78412 446 aaPredicted RBP16.95■□□□□ 0.3
RFTN1-207ENST00000453536 CCL14Q16627 93 aa16.95■□□□□ 0.3
RFTN1-207ENST00000453536 ANKRD45Q5TZF3 282 aa16.95■□□□□ 0.3
RFTN1-207ENST00000453536 TRIB2Q92519 343 aa16.95■□□□□ 0.3
RFTN1-207ENST00000453536 C12orf42Q96LP6 360 aa16.95■□□□□ 0.3
RFTN1-207ENST00000453536 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.95■□□□□ 0.3
RFTN1-207ENST00000453536 KIAA1683Q9H0B3 1180 aa16.95■□□□□ 0.3
RFTN1-207ENST00000453536 SPDYE16A6NNV3 312 aaPredicted RBP16.94■□□□□ 0.3
RFTN1-207ENST00000453536 FOXP2O15409 715 aa16.94■□□□□ 0.3
RFTN1-207ENST00000453536 RNF113AO15541 343 aaKnown RBP16.94■□□□□ 0.3
RFTN1-207ENST00000453536 GPAA1O43292 621 aa16.94■□□□□ 0.3
RFTN1-207ENST00000453536 IGHDP01880 384 aa16.94■□□□□ 0.3
RFTN1-207ENST00000453536 GCLCP48506 637 aaPredicted RBP16.94■□□□□ 0.3
RFTN1-207ENST00000453536 ERVK-9P63128 1117 aa16.94■□□□□ 0.3
RFTN1-207ENST00000453536 ERVK-24P63145 666 aa16.94■□□□□ 0.3
RFTN1-207ENST00000453536 PABPC4Q13310 644 aaKnown RBP eCLIP16.94■□□□□ 0.3
RFTN1-207ENST00000453536 SAMD1Q6SPF0 538 aaPredicted RBP16.94■□□□□ 0.3
RFTN1-207ENST00000453536 CATSPERGQ6ZRH7 1159 aa16.94■□□□□ 0.3
RFTN1-207ENST00000453536 C16orf86Q6ZW13 317 aa16.94■□□□□ 0.3
RFTN1-207ENST00000453536 APPBP2Q92624 585 aa16.94■□□□□ 0.3
RFTN1-207ENST00000453536 CABP5Q9NP86 173 aa16.94■□□□□ 0.3
RFTN1-207ENST00000453536 ATP8A2Q9NTI2 1148 aa16.94■□□□□ 0.3
RFTN1-207ENST00000453536 ZNFX1Q9P2E3 1918 aaKnown RBP16.94■□□□□ 0.3
RFTN1-207ENST00000453536 PRDM1O75626 825 aa16.93■□□□□ 0.3
RFTN1-207ENST00000453536 MX1P20591 662 aa16.93■□□□□ 0.3
RFTN1-207ENST00000453536 B4GALNT3Q6L9W6 998 aa16.93■□□□□ 0.3
RFTN1-207ENST00000453536 SLAIN1Q8ND83 568 aa16.93■□□□□ 0.3
RFTN1-207ENST00000453536 DIS3LQ8TF46 1054 aaKnown RBP16.93■□□□□ 0.3
RFTN1-207ENST00000453536 COA7Q96BR5 231 aa16.93■□□□□ 0.3
RFTN1-207ENST00000453536 GINM1Q9NU53 330 aa16.93■□□□□ 0.3
RFTN1-207ENST00000453536 TACC3Q9Y6A5 838 aa16.93■□□□□ 0.3
RFTN1-207ENST00000453536 MINDY4BA8MYZ0 360 aa16.92■□□□□ 0.3
RFTN1-207ENST00000453536 ATP2B2Q01814 1243 aa16.92■□□□□ 0.3
RFTN1-207ENST00000453536 IRF5Q13568 498 aa16.92■□□□□ 0.3
RFTN1-207ENST00000453536 PRPF38BQ5VTL8 546 aaKnown RBP16.92■□□□□ 0.3
RFTN1-207ENST00000453536 TMED8Q6PL24 325 aaPredicted RBP16.92■□□□□ 0.3
RFTN1-207ENST00000453536 GPRC5AQ8NFJ5 357 aa16.92■□□□□ 0.3
RFTN1-207ENST00000453536 U2AF1L4Q8WU68 220 aaKnown RBP16.92■□□□□ 0.3
RFTN1-207ENST00000453536 CHMP4CQ96CF2 233 aa16.92■□□□□ 0.3
RFTN1-207ENST00000453536 DEFB118Q96PH6 123 aa16.92■□□□□ 0.3
RFTN1-207ENST00000453536 FSD1Q9BTV5 496 aa16.92■□□□□ 0.3
RFTN1-207ENST00000453536 LNPKQ9C0E8 428 aa16.92■□□□□ 0.3
RFTN1-207ENST00000453536 INCENPQ9NQS7 918 aa16.92■□□□□ 0.3
RFTN1-207ENST00000453536 USP17L15C9J2P7 530 aa16.91■□□□□ 0.3
RFTN1-207ENST00000453536 USP17L13C9JLJ4 530 aa16.91■□□□□ 0.3
RFTN1-207ENST00000453536 USP17L11C9JVI0 530 aa16.91■□□□□ 0.3
RFTN1-207ENST00000453536 USP17L18D6R9N7 530 aa16.91■□□□□ 0.3
RFTN1-207ENST00000453536 USP17L22D6RA61 530 aa16.91■□□□□ 0.3
RFTN1-207ENST00000453536 USP17L17D6RBQ6 530 aa16.91■□□□□ 0.3
RFTN1-207ENST00000453536 USP17L19D6RCP7 530 aa16.91■□□□□ 0.3
RFTN1-207ENST00000453536 USP17L20D6RJB6 530 aa16.91■□□□□ 0.3
RFTN1-207ENST00000453536 EEF2P13639 858 aaKnown RBP16.91■□□□□ 0.3
RFTN1-207ENST00000453536 RASA1P20936 1047 aa16.91■□□□□ 0.3
RFTN1-207ENST00000453536 ICA1Q05084 483 aa16.91■□□□□ 0.3
RFTN1-207ENST00000453536 USP17L24Q0WX57 530 aa16.91■□□□□ 0.3
RFTN1-207ENST00000453536 VPS53Q5VIR6 699 aa16.91■□□□□ 0.3
RFTN1-207ENST00000453536 TMEM179Q6ZVK1 233 aa16.91■□□□□ 0.3
RFTN1-207ENST00000453536 GPR142Q7Z601 462 aa16.91■□□□□ 0.3
RFTN1-207ENST00000453536 GPATCH3Q96I76 525 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms