RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 DNAJC5GQ8N7S2 189 aa11.64□□□□□ -0.55
CCDC171-203ENST00000449575 WNK4Q96J92 1243 aa11.64□□□□□ -0.55
CCDC171-203ENST00000449575 TOMM22Q9NS69 142 aa11.64□□□□□ -0.55
CCDC171-203ENST00000449575 ZHX2Q9Y6X8 837 aa11.64□□□□□ -0.55
CCDC171-203ENST00000449575 SPDYE5A6NIY4 337 aa11.63□□□□□ -0.55
CCDC171-203ENST00000449575 B4E1Z4 1266 aa11.63□□□□□ -0.55
CCDC171-203ENST00000449575 SLC10A3P09131 477 aa11.63□□□□□ -0.55
CCDC171-203ENST00000449575 SPRYD7Q5W111 196 aa11.63□□□□□ -0.55
CCDC171-203ENST00000449575 SIAH1Q8IUQ4 282 aa11.63□□□□□ -0.55
CCDC171-203ENST00000449575 STAG1Q8WVM7 1258 aa11.63□□□□□ -0.55
CCDC171-203ENST00000449575 USP26Q9BXU7 913 aa11.63□□□□□ -0.55
CCDC171-203ENST00000449575 CTNNA3Q9UI47 895 aa11.63□□□□□ -0.55
CCDC171-203ENST00000449575 RANBP6O60518 1105 aaKnown RBP11.63□□□□□ -0.55
CCDC171-203ENST00000449575 ECE1P42892 770 aa11.63□□□□□ -0.55
CCDC171-203ENST00000449575 PDE4BQ07343 736 aa11.63□□□□□ -0.55
CCDC171-203ENST00000449575 ACER1Q8TDN7 264 aa11.63□□□□□ -0.55
CCDC171-203ENST00000449575 HHIPL1Q96JK4 782 aa11.63□□□□□ -0.55
CCDC171-203ENST00000449575 A0A1W2PRG0 241 aa11.62□□□□□ -0.55
CCDC171-203ENST00000449575 TRIM75PA6NK02 468 aa11.62□□□□□ -0.55
CCDC171-203ENST00000449575 TFAP4Q01664 338 aa11.62□□□□□ -0.55
CCDC171-203ENST00000449575 ADCK5Q3MIX3 580 aa11.62□□□□□ -0.55
CCDC171-203ENST00000449575 MFSD6Q6ZSS7 791 aa11.62□□□□□ -0.55
CCDC171-203ENST00000449575 ERO1BQ86YB8 467 aa11.62□□□□□ -0.55
CCDC171-203ENST00000449575 ZKSCAN3Q9BRR0 538 aa11.62□□□□□ -0.55
CCDC171-203ENST00000449575 PICK1Q9NRD5 415 aa11.62□□□□□ -0.55
CCDC171-203ENST00000449575 IL17RBQ9NRM6 502 aa11.62□□□□□ -0.55
CCDC171-203ENST00000449575 WDR33Q9C0J8 1336 aaKnown RBP11.62□□□□□ -0.55
CCDC171-203ENST00000449575 E7EWF7 191 aa11.62□□□□□ -0.55
CCDC171-203ENST00000449575 ASNSP08243 561 aa11.62□□□□□ -0.55
CCDC171-203ENST00000449575 SPP2Q13103 211 aa11.62□□□□□ -0.55
CCDC171-203ENST00000449575 ZNF444Q8N0Y2 327 aaPredicted RBP11.62□□□□□ -0.55
CCDC171-203ENST00000449575 AFG3L2Q9Y4W6 797 aa11.62□□□□□ -0.55
CCDC171-203ENST00000449575 CENPFP49454 3210 aa11.61□□□□□ -0.55
CCDC171-203ENST00000449575 ORC4O43929 436 aa11.61□□□□□ -0.55
CCDC171-203ENST00000449575 KDM4AO75164 1064 aa11.61□□□□□ -0.55
CCDC171-203ENST00000449575 REC8O95072 547 aa11.61□□□□□ -0.55
CCDC171-203ENST00000449575 ZYXQ15942 572 aaKnown RBP11.61□□□□□ -0.55
CCDC171-203ENST00000449575 CYB5R4Q7L1T6 521 aa11.61□□□□□ -0.55
CCDC171-203ENST00000449575 CHST3Q7LGC8 479 aa11.61□□□□□ -0.55
CCDC171-203ENST00000449575 MS4A4AQ96JQ5 239 aa11.61□□□□□ -0.55
CCDC171-203ENST00000449575 UPF2Q9HAU5 1272 aaKnown RBP11.61□□□□□ -0.55
CCDC171-203ENST00000449575 TSPY2A6NKD2 308 aa11.61□□□□□ -0.55
CCDC171-203ENST00000449575 USP17L5A8MUK1 530 aa11.61□□□□□ -0.55
CCDC171-203ENST00000449575 ESPNB1AK53 854 aa11.61□□□□□ -0.55
CCDC171-203ENST00000449575 SLC3A2P08195 630 aaKnown RBP11.61□□□□□ -0.55
CCDC171-203ENST00000449575 HSPA4P34932 840 aa11.61□□□□□ -0.55
CCDC171-203ENST00000449575 CHMP4CQ96CF2 233 aa11.61□□□□□ -0.55
CCDC171-203ENST00000449575 CEP95Q96GE4 821 aa11.61□□□□□ -0.55
CCDC171-203ENST00000449575 ZSWIM5Q9P217 1185 aa11.61□□□□□ -0.55
CCDC171-203ENST00000449575 LOC285556D6RIA3 1793 aa11.6□□□□□ -0.55
CCDC171-203ENST00000449575 IGKV6D-41A0A0C4DH26 115 aa11.6□□□□□ -0.55
CCDC171-203ENST00000449575 TSPY3P0CV98 308 aa11.6□□□□□ -0.55
CCDC171-203ENST00000449575 TSPY8P0CW00 308 aa11.6□□□□□ -0.55
CCDC171-203ENST00000449575 CPA1P15085 419 aa11.6□□□□□ -0.55
CCDC171-203ENST00000449575 KIF23Q02241 960 aaPredicted RBP11.6□□□□□ -0.55
CCDC171-203ENST00000449575 PPATQ06203 517 aa11.6□□□□□ -0.55
CCDC171-203ENST00000449575 KIAA1755Q5JYT7 1200 aa11.6□□□□□ -0.55
CCDC171-203ENST00000449575 TMEM179Q6ZVK1 233 aa11.6□□□□□ -0.55
CCDC171-203ENST00000449575 RASGRP2Q7LDG7 609 aa11.6□□□□□ -0.55
CCDC171-203ENST00000449575 CCDC17Q96LX7 622 aa11.6□□□□□ -0.55
CCDC171-203ENST00000449575 CABP5Q9NP86 173 aa11.6□□□□□ -0.55
CCDC171-203ENST00000449575 THSD7BQ9C0I4 1608 aa11.6□□□□□ -0.55
CCDC171-203ENST00000449575 UNCXA6NJT0 531 aa11.6□□□□□ -0.55
CCDC171-203ENST00000449575 EEF2P13639 858 aaKnown RBP11.6□□□□□ -0.55
CCDC171-203ENST00000449575 PPIL2Q13356 520 aa11.6□□□□□ -0.55
CCDC171-203ENST00000449575 MTMR2Q13614 643 aa11.6□□□□□ -0.55
CCDC171-203ENST00000449575 MOGSQ13724 837 aa11.6□□□□□ -0.55
CCDC171-203ENST00000449575 NEDD1Q8NHV4 660 aa11.6□□□□□ -0.55
CCDC171-203ENST00000449575 PTPN18Q99952 460 aa11.6□□□□□ -0.55
CCDC171-203ENST00000449575 SNX14Q9Y5W7 946 aa11.6□□□□□ -0.55
CCDC171-203ENST00000449575 PARP14Q460N5 1801 aa11.6□□□□□ -0.55
CCDC171-203ENST00000449575 ATP2B2Q01814 1243 aa11.59□□□□□ -0.55
CCDC171-203ENST00000449575 ICA1Q05084 483 aa11.59□□□□□ -0.55
CCDC171-203ENST00000449575 ZNF280CQ8ND82 737 aa11.59□□□□□ -0.55
CCDC171-203ENST00000449575 CCDC102AQ96A19 550 aa11.59□□□□□ -0.55
CCDC171-203ENST00000449575 TCEANC2Q96MN5 208 aa11.59□□□□□ -0.55
CCDC171-203ENST00000449575 SLKQ9H2G2 1235 aaPredicted RBP11.59□□□□□ -0.55
CCDC171-203ENST00000449575 GPHNQ9NQX3 736 aaPredicted RBP11.59□□□□□ -0.55
CCDC171-203ENST00000449575 ZBTB48P10074 688 aaPredicted RBP11.59□□□□□ -0.55
CCDC171-203ENST00000449575 HMGCS2P54868 508 aa11.59□□□□□ -0.55
CCDC171-203ENST00000449575 ANTXR2P58335 489 aa11.59□□□□□ -0.55
CCDC171-203ENST00000449575 BRI3BPQ8WY22 251 aa11.59□□□□□ -0.55
CCDC171-203ENST00000449575 TRIM44Q96DX7 344 aaPredicted RBP11.59□□□□□ -0.55
CCDC171-203ENST00000449575 SENP2Q9HC62 589 aa11.59□□□□□ -0.55
CCDC171-203ENST00000449575 MTMR4Q9NYA4 1195 aa11.59□□□□□ -0.55
CCDC171-203ENST00000449575 KCNH4Q9UQ05 1017 aa11.59□□□□□ -0.55
CCDC171-203ENST00000449575 PLIN4Q96Q06 1357 aa11.59□□□□□ -0.55
CCDC171-203ENST00000449575 RLFQ13129 1914 aa11.58□□□□□ -0.55
CCDC171-203ENST00000449575 MCM4P33991 863 aa11.58□□□□□ -0.55
CCDC171-203ENST00000449575 RCSD1Q6JBY9 416 aa11.58□□□□□ -0.55
CCDC171-203ENST00000449575 MB21D2Q8IYB1 491 aaPredicted RBP11.58□□□□□ -0.55
CCDC171-203ENST00000449575 KCNB2Q92953 911 aa11.58□□□□□ -0.55
CCDC171-203ENST00000449575 WDR18Q9BV38 432 aa11.58□□□□□ -0.55
CCDC171-203ENST00000449575 LRRC2Q9BYS8 371 aa11.58□□□□□ -0.55
CCDC171-203ENST00000449575 RNF41Q9H4P4 317 aaPredicted RBP11.58□□□□□ -0.55
CCDC171-203ENST00000449575 ZNF287Q9HBT7 754 aa11.58□□□□□ -0.55
CCDC171-203ENST00000449575 IGF2BP3O00425 579 aaKnown RBP eCLIP11.58□□□□□ -0.56
CCDC171-203ENST00000449575 LRRC47Q8N1G4 583 aaKnown RBP11.58□□□□□ -0.56
CCDC171-203ENST00000449575 ESR2Q92731 530 aa11.58□□□□□ -0.56
CCDC171-203ENST00000449575 EMILIN3Q9NT22 766 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms