RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 PLCG2P16885 1265 aa18.59■□□□□ 0.57
AP000253.1-201ENST00000449339 NDUFA8P51970 172 aa18.59■□□□□ 0.57
AP000253.1-201ENST00000449339 RCSD1Q6JBY9 416 aa18.59■□□□□ 0.57
AP000253.1-201ENST00000449339 DNAJC25Q9H1X3 360 aa18.59■□□□□ 0.57
AP000253.1-201ENST00000449339 hCG_1642624A0A1W2PR95 340 aa18.58■□□□□ 0.57
AP000253.1-201ENST00000449339 USP17L3A6NCW0 530 aa18.58■□□□□ 0.57
AP000253.1-201ENST00000449339 USP17L4A6NCW7 530 aa18.58■□□□□ 0.57
AP000253.1-201ENST00000449339 CAVIN2O95810 425 aa18.58■□□□□ 0.57
AP000253.1-201ENST00000449339 MMP1P03956 469 aa18.58■□□□□ 0.57
AP000253.1-201ENST00000449339 ZNF165P49910 485 aa18.58■□□□□ 0.57
AP000253.1-201ENST00000449339 AXDND1Q5T1B0 1012 aaPredicted RBP18.58■□□□□ 0.57
AP000253.1-201ENST00000449339 USP17L1Q7RTZ2 530 aa18.58■□□□□ 0.57
AP000253.1-201ENST00000449339 C7orf43Q8WVR3 580 aa18.58■□□□□ 0.57
AP000253.1-201ENST00000449339 KCNJ14Q9UNX9 436 aa18.58■□□□□ 0.57
AP000253.1-201ENST00000449339 BAZ2BQ9UIF8 2168 aaKnown RBP18.58■□□□□ 0.57
AP000253.1-201ENST00000449339 FOCADQ5VW36 1801 aa18.58■□□□□ 0.56
AP000253.1-201ENST00000449339 PICALMQ13492 652 aa18.58■□□□□ 0.56
AP000253.1-201ENST00000449339 SAFBQ15424 915 aaKnown RBP eCLIP18.58■□□□□ 0.56
AP000253.1-201ENST00000449339 CERS3Q8IU89 383 aa18.58■□□□□ 0.56
AP000253.1-201ENST00000449339 NOSTRINQ8IVI9 506 aa18.58■□□□□ 0.56
AP000253.1-201ENST00000449339 MARCKSP29966 332 aaPredicted RBP18.57■□□□□ 0.56
AP000253.1-201ENST00000449339 MAP3K14Q99558 947 aa18.57■□□□□ 0.56
AP000253.1-201ENST00000449339 BTBD18B2RXH4 712 aa18.57■□□□□ 0.56
AP000253.1-201ENST00000449339 ECE2O60344 883 aa18.57■□□□□ 0.56
AP000253.1-201ENST00000449339 WDHD1O75717 1129 aaPredicted RBP18.57■□□□□ 0.56
AP000253.1-201ENST00000449339 RASA1P20936 1047 aa18.57■□□□□ 0.56
AP000253.1-201ENST00000449339 FUT2Q10981 343 aa18.57■□□□□ 0.56
AP000253.1-201ENST00000449339 AOC3Q16853 763 aa18.57■□□□□ 0.56
AP000253.1-201ENST00000449339 DIS3L2Q8IYB7 885 aaKnown RBP18.57■□□□□ 0.56
AP000253.1-201ENST00000449339 SDF4Q9BRK5 362 aa18.57■□□□□ 0.56
AP000253.1-201ENST00000449339 RNF26Q9BY78 433 aaPredicted RBP18.57■□□□□ 0.56
AP000253.1-201ENST00000449339 SUGT1Q9Y2Z0 365 aa18.57■□□□□ 0.56
AP000253.1-201ENST00000449339 C21orf2O43822 256 aa18.56■□□□□ 0.56
AP000253.1-201ENST00000449339 PPP6R2O75170 966 aa18.56■□□□□ 0.56
AP000253.1-201ENST00000449339 DDAH1O94760 285 aa18.56■□□□□ 0.56
AP000253.1-201ENST00000449339 CMA1P23946 247 aa18.56■□□□□ 0.56
AP000253.1-201ENST00000449339 CDK8P49336 464 aa18.56■□□□□ 0.56
AP000253.1-201ENST00000449339 PTPAQ15257 358 aa18.56■□□□□ 0.56
AP000253.1-201ENST00000449339 PODNQ7Z5L7 613 aa18.56■□□□□ 0.56
AP000253.1-201ENST00000449339 JMYQ8N9B5 988 aa18.56■□□□□ 0.56
AP000253.1-201ENST00000449339 DDX4Q9NQI0 724 aaKnown RBP18.56■□□□□ 0.56
AP000253.1-201ENST00000449339 PCDHAC2Q9Y5I4 1007 aa18.56■□□□□ 0.56
AP000253.1-201ENST00000449339 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.55■□□□□ 0.56
AP000253.1-201ENST00000449339 TSPY3P0CV98 308 aa18.55■□□□□ 0.56
AP000253.1-201ENST00000449339 TSPY8P0CW00 308 aa18.55■□□□□ 0.56
AP000253.1-201ENST00000449339 STX1AQ16623 288 aa18.55■□□□□ 0.56
AP000253.1-201ENST00000449339 ZNF444Q8N0Y2 327 aaPredicted RBP18.55■□□□□ 0.56
AP000253.1-201ENST00000449339 SHISA4Q96DD7 197 aa18.55■□□□□ 0.56
AP000253.1-201ENST00000449339 CALM1P0DP23 149 aa18.55■□□□□ 0.56
AP000253.1-201ENST00000449339 CALM2P0DP24 149 aa18.55■□□□□ 0.56
AP000253.1-201ENST00000449339 CALM3P0DP25 149 aa18.55■□□□□ 0.56
AP000253.1-201ENST00000449339 KIAA0825Q8IV33 1275 aa18.55■□□□□ 0.56
AP000253.1-201ENST00000449339 FOXP1Q9H334 677 aaPredicted RBP18.55■□□□□ 0.56
AP000253.1-201ENST00000449339 USP40Q9NVE5 1235 aa18.55■□□□□ 0.56
AP000253.1-201ENST00000449339 RBM28Q9NW13 759 aaKnown RBP18.55■□□□□ 0.56
AP000253.1-201ENST00000449339 C10orf71Q711Q0 1435 aa18.54■□□□□ 0.56
AP000253.1-201ENST00000449339 SNED1Q8TER0 1413 aa18.54■□□□□ 0.56
AP000253.1-201ENST00000449339 AKAP17AQ02040 695 aaKnown RBP18.54■□□□□ 0.56
AP000253.1-201ENST00000449339 PKN1Q16512 942 aa18.54■□□□□ 0.56
AP000253.1-201ENST00000449339 C16orf86Q6ZW13 317 aa18.54■□□□□ 0.56
AP000253.1-201ENST00000449339 TMTC3Q6ZXV5 915 aa18.54■□□□□ 0.56
AP000253.1-201ENST00000449339 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.54■□□□□ 0.56
AP000253.1-201ENST00000449339 V9GY48 417 aaPredicted RBP18.54■□□□□ 0.56
AP000253.1-201ENST00000449339 ZNF500O60304 480 aaPredicted RBP18.54■□□□□ 0.56
AP000253.1-201ENST00000449339 ZNF202O95125 648 aa18.54■□□□□ 0.56
AP000253.1-201ENST00000449339 PFKFB1P16118 471 aa18.54■□□□□ 0.56
AP000253.1-201ENST00000449339 SRBD1Q8N5C6 995 aaKnown RBP18.54■□□□□ 0.56
AP000253.1-201ENST00000449339 ERCC4Q92889 916 aaPredicted RBP18.54■□□□□ 0.56
AP000253.1-201ENST00000449339 KAT14Q9H8E8 782 aa18.54■□□□□ 0.56
AP000253.1-201ENST00000449339 ZNF646O15015 1829 aaPredicted RBP18.54■□□□□ 0.56
AP000253.1-201ENST00000449339 APOBEC3HQ6NTF7 200 aaKnown RBP18.53■□□□□ 0.56
AP000253.1-201ENST00000449339 CDC42EP5Q6NZY7 148 aa18.53■□□□□ 0.56
AP000253.1-201ENST00000449339 C11orf57Q6ZUT1 292 aaPredicted RBP18.53■□□□□ 0.56
AP000253.1-201ENST00000449339 CTCFLQ8NI51 663 aaPredicted RBP18.53■□□□□ 0.56
AP000253.1-201ENST00000449339 MTMR7Q9Y216 660 aa18.53■□□□□ 0.56
AP000253.1-201ENST00000449339 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.53■□□□□ 0.56
AP000253.1-201ENST00000449339 CRKP46108 304 aa18.53■□□□□ 0.56
AP000253.1-201ENST00000449339 DACT2Q5SW24 774 aa18.53■□□□□ 0.56
AP000253.1-201ENST00000449339 PIBF1Q8WXW3 757 aa18.53■□□□□ 0.56
AP000253.1-201ENST00000449339 TEKT1Q969V4 418 aa18.53■□□□□ 0.56
AP000253.1-201ENST00000449339 ANO10Q9NW15 660 aa18.53■□□□□ 0.56
AP000253.1-201ENST00000449339 VPS54Q9P1Q0 977 aa18.53■□□□□ 0.56
AP000253.1-201ENST00000449339 CNTNAP5Q8WYK1 1306 aa18.52■□□□□ 0.56
AP000253.1-201ENST00000449339 PRPF3O43395 683 aaKnown RBP18.52■□□□□ 0.56
AP000253.1-201ENST00000449339 XBP1P17861 261 aa18.52■□□□□ 0.56
AP000253.1-201ENST00000449339 NR5A1Q13285 461 aa18.52■□□□□ 0.56
AP000253.1-201ENST00000449339 RILPL1Q5EBL4 403 aa18.52■□□□□ 0.56
AP000253.1-201ENST00000449339 DGKHQ86XP1 1220 aa18.52■□□□□ 0.56
AP000253.1-201ENST00000449339 PNMA1Q8ND90 353 aa18.52■□□□□ 0.56
AP000253.1-201ENST00000449339 OXER1Q8TDS5 423 aa18.52■□□□□ 0.56
AP000253.1-201ENST00000449339 DPEP1P16444 411 aa18.51■□□□□ 0.55
AP000253.1-201ENST00000449339 TOB1P50616 345 aaPredicted RBP18.51■□□□□ 0.55
AP000253.1-201ENST00000449339 IQCB1Q15051 598 aa18.51■□□□□ 0.55
AP000253.1-201ENST00000449339 STRIP1Q5VSL9 837 aa18.51■□□□□ 0.55
AP000253.1-201ENST00000449339 SHC4Q6S5L8 630 aa18.51■□□□□ 0.55
AP000253.1-201ENST00000449339 HHIPL2Q6UWX4 724 aa18.51■□□□□ 0.55
AP000253.1-201ENST00000449339 KIAA1468Q9P260 1216 aa18.51■□□□□ 0.55
AP000253.1-201ENST00000449339 STX8Q9UNK0 236 aa18.51■□□□□ 0.55
AP000253.1-201ENST00000449339 A0A087WWV3 80 aa18.51■□□□□ 0.55
AP000253.1-201ENST00000449339 KIAA2012Q0VF49 1180 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms