RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 TBC1D32Q96NH3 1257 aa13.99□□□□□ -0.17
RCL1-208ENST00000448872 UPF3BQ9BZI7 483 aaKnown RBP13.99□□□□□ -0.17
RCL1-208ENST00000448872 UPF2Q9HAU5 1272 aaKnown RBP13.99□□□□□ -0.17
RCL1-208ENST00000448872 SENP2Q9HC62 589 aa13.99□□□□□ -0.17
RCL1-208ENST00000448872 CREBZFQ9NS37 354 aa13.99□□□□□ -0.17
RCL1-208ENST00000448872 PAPPA2Q9BXP8 1791 aa13.98□□□□□ -0.17
RCL1-208ENST00000448872 PLIN4Q96Q06 1357 aa13.98□□□□□ -0.17
RCL1-208ENST00000448872 A0A1W2PRG0 241 aa13.98□□□□□ -0.17
RCL1-208ENST00000448872 SPDYE5A6NIY4 337 aa13.98□□□□□ -0.17
RCL1-208ENST00000448872 TRIM75PA6NK02 468 aa13.98□□□□□ -0.17
RCL1-208ENST00000448872 USP17L5A8MUK1 530 aa13.98□□□□□ -0.17
RCL1-208ENST00000448872 PRC1O43663 620 aa13.98□□□□□ -0.17
RCL1-208ENST00000448872 EEF2P13639 858 aaKnown RBP13.98□□□□□ -0.17
RCL1-208ENST00000448872 CASTP20810 708 aaKnown RBP13.98□□□□□ -0.17
RCL1-208ENST00000448872 ZNF157P51786 506 aaPredicted RBP13.98□□□□□ -0.17
RCL1-208ENST00000448872 ATP2B2Q01814 1243 aa13.98□□□□□ -0.17
RCL1-208ENST00000448872 ICA1Q05084 483 aa13.98□□□□□ -0.17
RCL1-208ENST00000448872 RGMBQ6NW40 437 aa13.98□□□□□ -0.17
RCL1-208ENST00000448872 MTMR4Q9NYA4 1195 aa13.98□□□□□ -0.17
RCL1-208ENST00000448872 POLR2AP24928 1970 aaKnown RBP13.97□□□□□ -0.17
RCL1-208ENST00000448872 MYH1P12882 1939 aa13.97□□□□□ -0.17
RCL1-208ENST00000448872 IRF6O14896 467 aa13.97□□□□□ -0.17
RCL1-208ENST00000448872 ANAPC15P60006 121 aa13.97□□□□□ -0.17
RCL1-208ENST00000448872 EXOSC10Q01780 885 aaKnown RBP13.97□□□□□ -0.17
RCL1-208ENST00000448872 SPP2Q13103 211 aa13.97□□□□□ -0.17
RCL1-208ENST00000448872 GRM1Q13255 1194 aa13.97□□□□□ -0.17
RCL1-208ENST00000448872 RCSD1Q6JBY9 416 aa13.97□□□□□ -0.17
RCL1-208ENST00000448872 PAXIP1Q6ZW49 1069 aaPredicted RBP13.97□□□□□ -0.17
RCL1-208ENST00000448872 ERO1BQ86YB8 467 aa13.97□□□□□ -0.17
RCL1-208ENST00000448872 RASAL3Q86YV0 1011 aa13.97□□□□□ -0.17
RCL1-208ENST00000448872 ENAHQ8N8S7 591 aaPredicted RBP13.97□□□□□ -0.17
RCL1-208ENST00000448872 CHMP4CQ96CF2 233 aa13.97□□□□□ -0.17
RCL1-208ENST00000448872 WNK4Q96J92 1243 aa13.97□□□□□ -0.17
RCL1-208ENST00000448872 ZSCAN10Q96SZ4 725 aaPredicted RBP13.97□□□□□ -0.17
RCL1-208ENST00000448872 KANSL2Q9H9L4 492 aa13.97□□□□□ -0.17
RCL1-208ENST00000448872 ZSWIM6Q9HCJ5 1215 aa13.97□□□□□ -0.17
RCL1-208ENST00000448872 CLIP2Q9UDT6 1046 aa13.97□□□□□ -0.17
RCL1-208ENST00000448872 AFG3L2Q9Y4W6 797 aa13.97□□□□□ -0.17
RCL1-208ENST00000448872 TNKSO95271 1327 aa13.97□□□□□ -0.17
RCL1-208ENST00000448872 LAMB1P07942 1786 aa13.96□□□□□ -0.17
RCL1-208ENST00000448872 UNCXA6NJT0 531 aa13.96□□□□□ -0.17
RCL1-208ENST00000448872 RPS6KB1P23443 525 aa13.96□□□□□ -0.17
RCL1-208ENST00000448872 MCM5P33992 734 aa13.96□□□□□ -0.17
RCL1-208ENST00000448872 ZYXQ15942 572 aaKnown RBP13.96□□□□□ -0.17
RCL1-208ENST00000448872 CYP4F22Q6NT55 531 aa13.96□□□□□ -0.17
RCL1-208ENST00000448872 BLOC1S2Q6QNY1 142 aa13.96□□□□□ -0.17
RCL1-208ENST00000448872 DHX32Q7L7V1 743 aaKnown RBP13.96□□□□□ -0.17
RCL1-208ENST00000448872 LRRC47Q8N1G4 583 aaKnown RBP13.96□□□□□ -0.17
RCL1-208ENST00000448872 IL17RAQ96F46 866 aa13.96□□□□□ -0.17
RCL1-208ENST00000448872 UBAC1Q9BSL1 405 aa13.96□□□□□ -0.17
RCL1-208ENST00000448872 TCP11L1Q9NUJ3 509 aa13.96□□□□□ -0.17
RCL1-208ENST00000448872 STX8Q9UNK0 236 aa13.96□□□□□ -0.17
RCL1-208ENST00000448872 FAM155AB1AL88 458 aaPredicted RBP13.95□□□□□ -0.18
RCL1-208ENST00000448872 IFIT3O14879 490 aaKnown RBP13.95□□□□□ -0.18
RCL1-208ENST00000448872 PSMA5P28066 241 aa13.95□□□□□ -0.18
RCL1-208ENST00000448872 NOVP48745 357 aa13.95□□□□□ -0.18
RCL1-208ENST00000448872 PPATQ06203 517 aa13.95□□□□□ -0.18
RCL1-208ENST00000448872 MKRN4PQ13434 485 aaPredicted RBP13.95□□□□□ -0.18
RCL1-208ENST00000448872 MTMR2Q13614 643 aa13.95□□□□□ -0.18
RCL1-208ENST00000448872 SEC23AQ15436 765 aa13.95□□□□□ -0.18
RCL1-208ENST00000448872 KIAA1755Q5JYT7 1200 aa13.95□□□□□ -0.18
RCL1-208ENST00000448872 SPRYD7Q5W111 196 aa13.95□□□□□ -0.18
RCL1-208ENST00000448872 RUFY3Q7L099 469 aa13.95□□□□□ -0.18
RCL1-208ENST00000448872 RASGRP2Q7LDG7 609 aa13.95□□□□□ -0.18
RCL1-208ENST00000448872 IQCA1Q86XH1 822 aa13.95□□□□□ -0.18
RCL1-208ENST00000448872 ZNF280CQ8ND82 737 aa13.95□□□□□ -0.18
RCL1-208ENST00000448872 IGDCC4Q8TDY8 1250 aa13.95□□□□□ -0.18
RCL1-208ENST00000448872 ZIC5Q96T25 663 aa13.95□□□□□ -0.18
RCL1-208ENST00000448872 WDR18Q9BV38 432 aa13.95□□□□□ -0.18
RCL1-208ENST00000448872 GINM1Q9NU53 330 aa13.95□□□□□ -0.18
RCL1-208ENST00000448872 RASSF10A6NK89 507 aa13.94□□□□□ -0.18
RCL1-208ENST00000448872 SH2B2O14492 632 aaPredicted RBP13.94□□□□□ -0.18
RCL1-208ENST00000448872 TTLL1O95922 423 aa13.94□□□□□ -0.18
RCL1-208ENST00000448872 SLC10A3P09131 477 aa13.94□□□□□ -0.18
RCL1-208ENST00000448872 HMGB1P09429 215 aaKnown RBP13.94□□□□□ -0.18
RCL1-208ENST00000448872 PPIL2Q13356 520 aa13.94□□□□□ -0.18
RCL1-208ENST00000448872 TMEM67Q5HYA8 995 aa13.94□□□□□ -0.18
RCL1-208ENST00000448872 TMEM47Q9BQJ4 181 aa13.94□□□□□ -0.18
RCL1-208ENST00000448872 LARP6Q9BRS8 491 aaKnown RBP13.94□□□□□ -0.18
RCL1-208ENST00000448872 TM6SF1Q9BZW5 370 aa13.94□□□□□ -0.18
RCL1-208ENST00000448872 NYAP2Q9P242 653 aa13.94□□□□□ -0.18
RCL1-208ENST00000448872 MTMR7Q9Y216 660 aa13.94□□□□□ -0.18
RCL1-208ENST00000448872 HSPA6P17066 643 aa13.93□□□□□ -0.18
RCL1-208ENST00000448872 DEFB115Q30KQ5 88 aa13.93□□□□□ -0.18
RCL1-208ENST00000448872 Q6ZUG5 572 aa13.93□□□□□ -0.18
RCL1-208ENST00000448872 SPICE1Q8N0Z3 855 aa13.93□□□□□ -0.18
RCL1-208ENST00000448872 HHIPL1Q96JK4 782 aa13.93□□□□□ -0.18
RCL1-208ENST00000448872 FEZ1Q99689 392 aa13.93□□□□□ -0.18
RCL1-208ENST00000448872 LY9Q9HBG7 655 aa13.93□□□□□ -0.18
RCL1-208ENST00000448872 AS3MTQ9HBK9 375 aa13.93□□□□□ -0.18
RCL1-208ENST00000448872 EMILIN3Q9NT22 766 aa13.93□□□□□ -0.18
RCL1-208ENST00000448872 TMX2Q9Y320 296 aa13.93□□□□□ -0.18
RCL1-208ENST00000448872 CYP46A1Q9Y6A2 500 aa13.93□□□□□ -0.18
RCL1-208ENST00000448872 LAMA4Q16363 1823 aa13.93□□□□□ -0.18
RCL1-208ENST00000448872 USP17L10C9JJH3 530 aa13.93□□□□□ -0.18
RCL1-208ENST00000448872 RAD21O60216 631 aa13.93□□□□□ -0.18
RCL1-208ENST00000448872 AOC2O75106 756 aa13.93□□□□□ -0.18
RCL1-208ENST00000448872 NT5C2P49902 561 aa13.93□□□□□ -0.18
RCL1-208ENST00000448872 HMGCS2P54868 508 aa13.93□□□□□ -0.18
RCL1-208ENST00000448872 BACE1P56817 501 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms