RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 CCT8L2Q96SF2 557 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 HAUS7Q99871 368 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 PAGR1Q9BTK6 254 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 JADE2Q9NQC1 790 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 FPGT-TNNI3KV9GXZ4 949 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 FLT4P35916 1363 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 RFX7Q2KHR2 1363 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 CEP170BQ9Y4F5 1589 aaPredicted RBP10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 TMEM131LA2VDJ0 1609 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 KLHL33A6NCF5 533 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 PRC1O43663 620 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 HOXB7P09629 217 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 FAM43BQ6ZT52 329 aaPredicted RBP10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 RNPC3Q96LT9 517 aaKnown RBP10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 DBNDD2Q9BQY9 259 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 HELLSQ9NRZ9 838 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 ACEP12821 1306 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 OVOS2A0A0J9YW53 1432 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 KDM6AO15550 1401 aaPredicted RBP10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 OVOS2Q6IE36 1432 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 PRR36Q9H6K5 1346 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 SEC24CP53992 1094 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 DRP2Q13474 957 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 AP1ARQ63HQ0 302 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 STK11IPQ8N1F8 1099 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 ACTR5Q9H9F9 607 aaPredicted RBP10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 SPATS2LQ9NUQ6 558 aaKnown RBP10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 HPS5Q9UPZ3 1129 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 PDE2AO00408 941 aaPredicted RBP10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 PPP1R12BO60237 982 aaPredicted RBP10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 SLC8A1P32418 973 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 HAND2P61296 217 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 HDLBPQ00341 1268 aaKnown RBP10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 TFCP2Q12800 502 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 UBE3BQ7Z3V4 1068 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 KIAA1328Q86T90 577 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 NLRP14Q86W24 1093 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 FUKQ8N0W3 1084 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 TSEN2Q8NCE0 465 aaKnown RBP10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 LINS1Q8NG48 757 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 ATP6V0A4Q9HBG4 840 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 TFR2Q9UP52 801 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 CHD1O14646 1710 aa10.57□□□□□ -0.72
SYNPO2-204ENST00000448416 ITIH6Q6UXX5 1313 aa10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 RNF225M0QZC1 329 aaPredicted RBP10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 KCNQ3O43525 872 aa10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 PPP1R37O75864 691 aa10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 GRIK3Q13003 919 aa10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 TRIM29Q14134 588 aa10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 FKBP15Q5T1M5 1219 aa10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 MYCBPAPQ8TBZ2 947 aa10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 ZNF483Q8TF39 744 aaPredicted RBP10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 RSRC1Q96IZ7 334 aaKnown RBP10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 CALR3Q96L12 384 aaKnown RBP10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 VPS16Q9H269 839 aa10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 DMGDHQ9UI17 866 aaKnown RBP10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 TPX2Q9ULW0 747 aaKnown RBP10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 REXO2Q9Y3B8 237 aaKnown RBP10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 EPHB4P54760 987 aa10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 PTGISQ16647 500 aa10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 KANK3Q6NY19 840 aa10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 FAM228AQ86W67 206 aa10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 E7EVH7 732 aa10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 KRT14P02533 472 aa10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 MATR3P43243 847 aaKnown RBP eCLIP10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 MRPS25P82663 173 aaKnown RBP10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 EZH2Q15910 746 aaKnown RBP10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 EHBP1Q8NDI1 1231 aa10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 HDAC7Q8WUI4 952 aa10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 LRRC1Q9BTT6 524 aa10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 LRRC37A3O60309 1634 aa10.56□□□□□ -0.72
SYNPO2-204ENST00000448416 SLC7A5Q01650 507 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 KDM7AQ6ZMT4 941 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 FBXL16Q8N461 479 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 MAGEC3Q8TD91 643 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 LTV1Q96GA3 475 aaPredicted RBP10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 ZIM3Q96PE6 472 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 HAUS2Q9NVX0 235 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 KRT86O43790 486 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 IDEP14735 1019 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 INHBEP58166 350 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 TSR1Q2NL82 804 aaKnown RBP10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 CDKAL1Q5VV42 579 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 FBXO31Q5XUX0 539 aaPredicted RBP10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 TLDC1Q6P9B6 456 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 TMED8Q6PL24 325 aaPredicted RBP10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 SH3GL3Q99963 347 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 GGA2Q9UJY4 613 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 PEX19P40855 299 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 GRIN1Q05586 938 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 AIMP1Q12904 312 aaKnown RBP10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 TRIM14Q14142 442 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 EMBQ6PCB8 327 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 SEC31BQ9NQW1 1179 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 AKAP12Q02952 1782 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 FAM107AO95990 144 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 NR1D1P20393 614 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 APBA1Q02410 837 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 PROSER3Q2NL68 480 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 CFAP58Q5T655 872 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms