RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 ERVK-24P63145 666 aa8.62□□□□□ -1.03
COL11A1-205ENST00000447608 HSP90AA2PQ14568 343 aaPredicted RBP8.62□□□□□ -1.03
COL11A1-205ENST00000447608 SETDB1Q15047 1291 aa8.62□□□□□ -1.03
COL11A1-205ENST00000447608 ZBTB37Q5TC79 503 aa8.62□□□□□ -1.03
COL11A1-205ENST00000447608 RAVER1Q8IY67 606 aaKnown RBP8.62□□□□□ -1.03
COL11A1-205ENST00000447608 IPO9Q96P70 1041 aaKnown RBP8.62□□□□□ -1.03
COL11A1-205ENST00000447608 RUSC1Q9BVN2 902 aa8.62□□□□□ -1.03
COL11A1-205ENST00000447608 RAD18Q9NS91 495 aa8.62□□□□□ -1.03
COL11A1-205ENST00000447608 LRP2BPQ9P2M1 347 aa8.62□□□□□ -1.03
COL11A1-205ENST00000447608 SUCOQ9UBS9 1254 aaKnown RBP8.62□□□□□ -1.03
COL11A1-205ENST00000447608 C9IYK1 514 aa8.61□□□□□ -1.03
COL11A1-205ENST00000447608 EPHX1P07099 455 aa8.61□□□□□ -1.03
COL11A1-205ENST00000447608 SDSP20132 328 aa8.61□□□□□ -1.03
COL11A1-205ENST00000447608 MSL1Q68DK7 614 aa8.61□□□□□ -1.03
COL11A1-205ENST00000447608 CNNM4Q6P4Q7 775 aa8.61□□□□□ -1.03
COL11A1-205ENST00000447608 LRRN4CLQ8ND94 238 aa8.61□□□□□ -1.03
COL11A1-205ENST00000447608 PPP1R14AQ96A00 147 aa8.61□□□□□ -1.03
COL11A1-205ENST00000447608 HAUS7Q99871 368 aa8.61□□□□□ -1.03
COL11A1-205ENST00000447608 DPH2Q9BQC3 489 aaPredicted RBP8.61□□□□□ -1.03
COL11A1-205ENST00000447608 AARSD1Q9BTE6 412 aaKnown RBP8.61□□□□□ -1.03
COL11A1-205ENST00000447608 TARS2Q9BW92 718 aaKnown RBP8.61□□□□□ -1.03
COL11A1-205ENST00000447608 LGR4Q9BXB1 951 aa8.61□□□□□ -1.03
COL11A1-205ENST00000447608 FBRSQ9HAH7 460 aa8.61□□□□□ -1.03
COL11A1-205ENST00000447608 GABBR1Q9UBS5 961 aa8.61□□□□□ -1.03
COL11A1-205ENST00000447608 MAPRE3Q9UPY8 281 aa8.61□□□□□ -1.03
COL11A1-205ENST00000447608 EID1Q9Y6B2 187 aa8.61□□□□□ -1.03
COL11A1-205ENST00000447608 FANCGO15287 622 aa8.6□□□□□ -1.03
COL11A1-205ENST00000447608 ITGAVP06756 1048 aa8.6□□□□□ -1.03
COL11A1-205ENST00000447608 NAT2P11245 290 aa8.6□□□□□ -1.03
COL11A1-205ENST00000447608 GBP1P32455 592 aa8.6□□□□□ -1.03
COL11A1-205ENST00000447608 PPP2R2AP63151 447 aa8.6□□□□□ -1.03
COL11A1-205ENST00000447608 ID3Q02535 119 aa8.6□□□□□ -1.03
COL11A1-205ENST00000447608 AKAP4Q5JQC9 854 aa8.6□□□□□ -1.03
COL11A1-205ENST00000447608 HP1BP3Q5SSJ5 553 aaPredicted RBP8.6□□□□□ -1.03
COL11A1-205ENST00000447608 AXDND1Q5T1B0 1012 aaPredicted RBP8.6□□□□□ -1.03
COL11A1-205ENST00000447608 SLC6A19Q695T7 634 aa8.6□□□□□ -1.03
COL11A1-205ENST00000447608 HEATR6Q6AI08 1181 aaKnown RBP8.6□□□□□ -1.03
COL11A1-205ENST00000447608 SLCO4C1Q6ZQN7 724 aa8.6□□□□□ -1.03
COL11A1-205ENST00000447608 HID1Q8IV36 788 aa8.6□□□□□ -1.03
COL11A1-205ENST00000447608 SCUBE1Q8IWY4 988 aa8.6□□□□□ -1.03
COL11A1-205ENST00000447608 MRPL41Q8IXM3 137 aaKnown RBP8.6□□□□□ -1.03
COL11A1-205ENST00000447608 GPR161Q8N6U8 529 aaKnown RBP8.6□□□□□ -1.03
COL11A1-205ENST00000447608 GOLGA6L1Q8N7Z2 621 aa8.6□□□□□ -1.03
COL11A1-205ENST00000447608 FGD4Q96M96 766 aa8.6□□□□□ -1.03
COL11A1-205ENST00000447608 APEX2Q9UBZ4 518 aa8.6□□□□□ -1.03
COL11A1-205ENST00000447608 MCM8Q9UJA3 840 aa8.6□□□□□ -1.03
COL11A1-205ENST00000447608 GDF2Q9UK05 429 aaPredicted RBP8.6□□□□□ -1.03
COL11A1-205ENST00000447608 PPP1R9AQ9ULJ8 1098 aa8.6□□□□□ -1.03
COL11A1-205ENST00000447608 RB1CC1Q8TDY2 1594 aa8.6□□□□□ -1.03
COL11A1-205ENST00000447608 IGF1RP08069 1367 aa8.6□□□□□ -1.03
COL11A1-205ENST00000447608 M0R082 166 aa8.59□□□□□ -1.03
COL11A1-205ENST00000447608 EPXP11678 715 aa8.59□□□□□ -1.03
COL11A1-205ENST00000447608 NTF4P34130 210 aa8.59□□□□□ -1.03
COL11A1-205ENST00000447608 GRIA2P42262 883 aa8.59□□□□□ -1.03
COL11A1-205ENST00000447608 NKG7Q16617 165 aa8.59□□□□□ -1.03
COL11A1-205ENST00000447608 LRRTM3Q86VH5 581 aa8.59□□□□□ -1.03
COL11A1-205ENST00000447608 ATL2Q8NHH9 583 aa8.59□□□□□ -1.03
COL11A1-205ENST00000447608 ZNF417Q8TAU3 575 aa8.59□□□□□ -1.03
COL11A1-205ENST00000447608 BAHD1Q8TBE0 780 aaPredicted RBP8.59□□□□□ -1.03
COL11A1-205ENST00000447608 CCDC74BQ96LY2 380 aa8.59□□□□□ -1.03
COL11A1-205ENST00000447608 ZNF587Q96SQ5 575 aaPredicted RBP8.59□□□□□ -1.03
COL11A1-205ENST00000447608 MRPL4Q9BYD3 311 aaKnown RBP8.59□□□□□ -1.03
COL11A1-205ENST00000447608 KCNK4Q9NYG8 393 aa8.59□□□□□ -1.03
COL11A1-205ENST00000447608 WASHC2CQ9Y4E1 1318 aa8.58□□□□□ -1.04
COL11A1-205ENST00000447608 CCDC194A0A1B0GVG4 234 aa8.58□□□□□ -1.04
COL11A1-205ENST00000447608 ALG1L2C9J202 215 aa8.58□□□□□ -1.04
COL11A1-205ENST00000447608 C11orf95C9JLR9 678 aaPredicted RBP8.58□□□□□ -1.04
COL11A1-205ENST00000447608 TMPRSS2O15393 492 aa8.58□□□□□ -1.04
COL11A1-205ENST00000447608 PRODHO43272 600 aa8.58□□□□□ -1.04
COL11A1-205ENST00000447608 CD68P34810 354 aaPredicted RBP8.58□□□□□ -1.04
COL11A1-205ENST00000447608 LAPTM4AQ15012 233 aa8.58□□□□□ -1.04
COL11A1-205ENST00000447608 FOXD4L6Q3SYB3 417 aaPredicted RBP8.58□□□□□ -1.04
COL11A1-205ENST00000447608 FOXD4L3Q6VB84 417 aaPredicted RBP8.58□□□□□ -1.04
COL11A1-205ENST00000447608 ZNF227Q86WZ6 799 aa8.58□□□□□ -1.04
COL11A1-205ENST00000447608 AFAP1L2Q8N4X5 818 aa8.58□□□□□ -1.04
COL11A1-205ENST00000447608 ZNF507Q8TCN5 953 aa8.58□□□□□ -1.04
COL11A1-205ENST00000447608 TCEAL9Q9UHQ7 104 aa8.58□□□□□ -1.04
COL11A1-205ENST00000447608 CBFA2T2O43439 604 aa8.57□□□□□ -1.04
COL11A1-205ENST00000447608 CLEC3AO75596 197 aa8.57□□□□□ -1.04
COL11A1-205ENST00000447608 PABPC1P11940 636 aaKnown RBP8.57□□□□□ -1.04
COL11A1-205ENST00000447608 PMLP29590 882 aa8.57□□□□□ -1.04
COL11A1-205ENST00000447608 EXOSC6Q5RKV6 272 aaKnown RBP8.57□□□□□ -1.04
COL11A1-205ENST00000447608 DCAF15Q66K64 600 aa8.57□□□□□ -1.04
COL11A1-205ENST00000447608 NSMFQ6X4W1 530 aa8.57□□□□□ -1.04
COL11A1-205ENST00000447608 STRA8Q7Z7C7 330 aa8.57□□□□□ -1.04
COL11A1-205ENST00000447608 DMRTC2Q8IXT2 367 aaPredicted RBP8.57□□□□□ -1.04
COL11A1-205ENST00000447608 ZNF513Q8N8E2 541 aaPredicted RBP8.57□□□□□ -1.04
COL11A1-205ENST00000447608 UBASH3BQ8TF42 649 aa8.57□□□□□ -1.04
COL11A1-205ENST00000447608 ZNF512BQ96KM6 892 aaPredicted RBP8.57□□□□□ -1.04
COL11A1-205ENST00000447608 KLHL25Q9H0H3 589 aa8.57□□□□□ -1.04
COL11A1-205ENST00000447608 DISC1Q9NRI5 854 aa8.57□□□□□ -1.04
COL11A1-205ENST00000447608 CRIM1Q9NZV1 1036 aa8.57□□□□□ -1.04
COL11A1-205ENST00000447608 MAGEC2Q9UBF1 373 aaPredicted RBP8.57□□□□□ -1.04
COL11A1-205ENST00000447608 SYNGAP1Q96PV0 1343 aa8.56□□□□□ -1.04
COL11A1-205ENST00000447608 DNAJC25-GNG10A0A024R161 153 aa8.56□□□□□ -1.04
COL11A1-205ENST00000447608 TBX1O43435 398 aa8.56□□□□□ -1.04
COL11A1-205ENST00000447608 FGFR1P11362 822 aa8.56□□□□□ -1.04
COL11A1-205ENST00000447608 SUMO1P63165 101 aaKnown RBP8.56□□□□□ -1.04
COL11A1-205ENST00000447608 C1orf229Q6ZS94 237 aaPredicted RBP8.56□□□□□ -1.04
COL11A1-205ENST00000447608 UBE3DQ7Z6J8 389 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms