RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 SRBD1Q8N5C6 995 aaKnown RBP10.77□□□□□ -0.69
KLHL3-202ENST00000447439 WDR24Q96S15 920 aa10.77□□□□□ -0.69
KLHL3-202ENST00000447439 CDC5LQ99459 802 aaKnown RBP10.77□□□□□ -0.69
KLHL3-202ENST00000447439 BCL9LQ86UU0 1499 aa10.77□□□□□ -0.69
KLHL3-202ENST00000447439 CCDC196A0A1B0GTZ2 297 aa10.77□□□□□ -0.69
KLHL3-202ENST00000447439 KRT2P35908 639 aa10.77□□□□□ -0.69
KLHL3-202ENST00000447439 SARSP49591 514 aaKnown RBP10.77□□□□□ -0.69
KLHL3-202ENST00000447439 MECOMQ03112 1051 aa10.77□□□□□ -0.69
KLHL3-202ENST00000447439 DMTNQ08495 405 aa10.77□□□□□ -0.69
KLHL3-202ENST00000447439 DPYDQ12882 1025 aa10.77□□□□□ -0.69
KLHL3-202ENST00000447439 PIK3AP1Q6ZUJ8 805 aa10.77□□□□□ -0.69
KLHL3-202ENST00000447439 CATIPQ7Z7H3 387 aa10.77□□□□□ -0.69
KLHL3-202ENST00000447439 RASGRP4Q8TDF6 673 aa10.77□□□□□ -0.69
KLHL3-202ENST00000447439 AK7Q96M32 723 aa10.77□□□□□ -0.69
KLHL3-202ENST00000447439 GPR101Q96P66 508 aaPredicted RBP10.77□□□□□ -0.69
KLHL3-202ENST00000447439 BAG1Q99933 345 aaPredicted RBP10.77□□□□□ -0.69
KLHL3-202ENST00000447439 PHF20Q9BVI0 1012 aa10.77□□□□□ -0.69
KLHL3-202ENST00000447439 DDX41Q9UJV9 622 aaKnown RBP10.77□□□□□ -0.69
KLHL3-202ENST00000447439 MAPK8IP1Q9UQF2 711 aa10.77□□□□□ -0.69
KLHL3-202ENST00000447439 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.77□□□□□ -0.69
KLHL3-202ENST00000447439 SPATA31A1Q5TZJ5 1347 aa10.76□□□□□ -0.69
KLHL3-202ENST00000447439 BAZ2BQ9UIF8 2168 aaKnown RBP10.76□□□□□ -0.69
KLHL3-202ENST00000447439 SOWAHDA6NJG2 315 aa10.76□□□□□ -0.69
KLHL3-202ENST00000447439 MCM7P33993 719 aa10.76□□□□□ -0.69
KLHL3-202ENST00000447439 ETF1P62495 437 aaKnown RBP10.76□□□□□ -0.69
KLHL3-202ENST00000447439 SYCP1Q15431 976 aa10.76□□□□□ -0.69
KLHL3-202ENST00000447439 CAVIN4Q5BKX8 364 aa10.76□□□□□ -0.69
KLHL3-202ENST00000447439 RASGRP2Q7LDG7 609 aa10.76□□□□□ -0.69
KLHL3-202ENST00000447439 TC2NQ8N9U0 490 aa10.76□□□□□ -0.69
KLHL3-202ENST00000447439 ZNF397Q8NF99 534 aaPredicted RBP10.76□□□□□ -0.69
KLHL3-202ENST00000447439 PAGE5Q96GU1 130 aa10.76□□□□□ -0.69
KLHL3-202ENST00000447439 CARD6Q9BX69 1037 aa10.76□□□□□ -0.69
KLHL3-202ENST00000447439 PODXL2Q9NZ53 605 aa10.76□□□□□ -0.69
KLHL3-202ENST00000447439 PPP2R2CQ9Y2T4 447 aa10.76□□□□□ -0.69
KLHL3-202ENST00000447439 CHD4Q14839 1912 aa10.76□□□□□ -0.69
KLHL3-202ENST00000447439 DOCK2Q92608 1830 aa10.76□□□□□ -0.69
KLHL3-202ENST00000447439 NRDCO43847 1150 aa10.76□□□□□ -0.69
KLHL3-202ENST00000447439 ZNF18P17022 549 aa10.76□□□□□ -0.69
KLHL3-202ENST00000447439 TROAPQ12815 778 aa10.76□□□□□ -0.69
KLHL3-202ENST00000447439 NPY5RQ15761 445 aa10.76□□□□□ -0.69
KLHL3-202ENST00000447439 ARHGAP29Q52LW3 1261 aa10.76□□□□□ -0.69
KLHL3-202ENST00000447439 CCDC93Q567U6 631 aa10.76□□□□□ -0.69
KLHL3-202ENST00000447439 AMIGO3Q86WK7 504 aa10.76□□□□□ -0.69
KLHL3-202ENST00000447439 GPKOWQ92917 476 aaPredicted RBP eCLIP10.76□□□□□ -0.69
KLHL3-202ENST00000447439 RNF26Q9BY78 433 aaPredicted RBP10.76□□□□□ -0.69
KLHL3-202ENST00000447439 KCND1Q9NSA2 647 aa10.76□□□□□ -0.69
KLHL3-202ENST00000447439 OGFRQ9NZT2 677 aa10.76□□□□□ -0.69
KLHL3-202ENST00000447439 ZNF804BA4D1E1 1349 aa10.76□□□□□ -0.69
KLHL3-202ENST00000447439 MYH14Q7Z406 1995 aaKnown RBP10.75□□□□□ -0.69
KLHL3-202ENST00000447439 USP17L8P0C7I0 530 aa10.75□□□□□ -0.69
KLHL3-202ENST00000447439 PTGDRQ13258 359 aa10.75□□□□□ -0.69
KLHL3-202ENST00000447439 TMTC2Q8N394 836 aa10.75□□□□□ -0.69
KLHL3-202ENST00000447439 DYNLL2Q96FJ2 89 aa10.75□□□□□ -0.69
KLHL3-202ENST00000447439 PLIN2Q99541 437 aa10.75□□□□□ -0.69
KLHL3-202ENST00000447439 L2HGDHQ9H9P8 463 aa10.75□□□□□ -0.69
KLHL3-202ENST00000447439 GNL3LQ9NVN8 582 aaKnown RBP10.75□□□□□ -0.69
KLHL3-202ENST00000447439 HOOK1Q9UJC3 728 aaKnown RBP10.75□□□□□ -0.69
KLHL3-202ENST00000447439 TIAM2Q8IVF5 1701 aa10.75□□□□□ -0.69
KLHL3-202ENST00000447439 NID2Q14112 1375 aa10.75□□□□□ -0.69
KLHL3-202ENST00000447439 RTL9Q8NET4 1388 aa10.75□□□□□ -0.69
KLHL3-202ENST00000447439 CCT6AP40227 531 aaKnown RBP10.75□□□□□ -0.69
KLHL3-202ENST00000447439 GNG11P61952 73 aa10.75□□□□□ -0.69
KLHL3-202ENST00000447439 TBX2Q13207 712 aaPredicted RBP10.75□□□□□ -0.69
KLHL3-202ENST00000447439 IL17AQ16552 155 aa10.75□□□□□ -0.69
KLHL3-202ENST00000447439 FAM98CQ17RN3 349 aaKnown RBP10.75□□□□□ -0.69
KLHL3-202ENST00000447439 SPECC1LQ69YQ0 1117 aa10.75□□□□□ -0.69
KLHL3-202ENST00000447439 IQCA1Q86XH1 822 aa10.75□□□□□ -0.69
KLHL3-202ENST00000447439 NSUN4Q96CB9 384 aaKnown RBP10.75□□□□□ -0.69
KLHL3-202ENST00000447439 ZSWIM4Q9H7M6 989 aa10.75□□□□□ -0.69
KLHL3-202ENST00000447439 CTNND2Q9UQB3 1225 aa10.75□□□□□ -0.69
KLHL3-202ENST00000447439 PLCD1P51178 756 aa10.74□□□□□ -0.69
KLHL3-202ENST00000447439 TTC38Q5R3I4 469 aa10.74□□□□□ -0.69
KLHL3-202ENST00000447439 MLKLQ8NB16 471 aa10.74□□□□□ -0.69
KLHL3-202ENST00000447439 ENOX1Q8TC92 643 aaKnown RBP10.74□□□□□ -0.69
KLHL3-202ENST00000447439 CPVLQ9H3G5 476 aa10.74□□□□□ -0.69
KLHL3-202ENST00000447439 MRPL44Q9H9J2 332 aaKnown RBP10.74□□□□□ -0.69
KLHL3-202ENST00000447439 LZTFL1Q9NQ48 299 aa10.74□□□□□ -0.69
KLHL3-202ENST00000447439 CEP131Q9UPN4 1083 aa10.74□□□□□ -0.69
KLHL3-202ENST00000447439 BAZ2AQ9UIF9 1905 aaKnown RBP10.74□□□□□ -0.69
KLHL3-202ENST00000447439 COL16A1Q07092 1604 aaPredicted RBP10.74□□□□□ -0.69
KLHL3-202ENST00000447439 PRPF3O43395 683 aaKnown RBP10.74□□□□□ -0.69
KLHL3-202ENST00000447439 SEC31AO94979 1220 aaKnown RBP10.74□□□□□ -0.69
KLHL3-202ENST00000447439 TFRCP02786 760 aaKnown RBP10.74□□□□□ -0.69
KLHL3-202ENST00000447439 NLRP5P59047 1200 aa10.74□□□□□ -0.69
KLHL3-202ENST00000447439 RBL2Q08999 1139 aa10.74□□□□□ -0.69
KLHL3-202ENST00000447439 NT5DC1Q5TFE4 455 aa10.74□□□□□ -0.69
KLHL3-202ENST00000447439 TMTC3Q6ZXV5 915 aa10.74□□□□□ -0.69
KLHL3-202ENST00000447439 FEZ1Q99689 392 aa10.74□□□□□ -0.69
KLHL3-202ENST00000447439 DCP1AQ9NPI6 582 aaPredicted RBP10.74□□□□□ -0.69
KLHL3-202ENST00000447439 BSDC1Q9NW68 430 aaPredicted RBP10.74□□□□□ -0.69
KLHL3-202ENST00000447439 ANAPC4Q9UJX5 808 aa10.74□□□□□ -0.69
KLHL3-202ENST00000447439 PARP3Q9Y6F1 533 aa10.74□□□□□ -0.69
KLHL3-202ENST00000447439 CNTNAP5Q8WYK1 1306 aa10.74□□□□□ -0.69
KLHL3-202ENST00000447439 SYNRGQ9UMZ2 1314 aa10.74□□□□□ -0.69
KLHL3-202ENST00000447439 PLCH1Q4KWH8 1693 aa10.74□□□□□ -0.69
KLHL3-202ENST00000447439 PP2D1A8MPX8 630 aa10.73□□□□□ -0.69
KLHL3-202ENST00000447439 KIF2AO00139 706 aaPredicted RBP10.73□□□□□ -0.69
KLHL3-202ENST00000447439 CLCN6P51797 869 aa10.73□□□□□ -0.69
KLHL3-202ENST00000447439 CUL4BQ13620 913 aa10.73□□□□□ -0.69
KLHL3-202ENST00000447439 GRIK5Q16478 980 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms