RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 CPVLQ9H3G5 476 aa8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 RNF41Q9H4P4 317 aaPredicted RBP8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 ZBTB21Q9ULJ3 1066 aa8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 ABT1Q9ULW3 272 aaKnown RBP8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 FRMPD2Q68DX3 1309 aaPredicted RBP8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 ORC4O43929 436 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 ECM2O94769 699 aaPredicted RBP8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 EEF2P13639 858 aaKnown RBP8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 MCM5P33992 734 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 CAP2P40123 477 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 FOSBP53539 338 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 CCT2P78371 535 aaKnown RBP8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 TOB2Q14106 344 aaPredicted RBP8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 KIAA1755Q5JYT7 1200 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 TATDN1Q6P1N9 297 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 CMTR1Q8N1G2 835 aaKnown RBP8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 ENAHQ8N8S7 591 aaPredicted RBP8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 SMC1BQ8NDV3 1235 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 NUP133Q8WUM0 1156 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 KLRG1Q96E93 195 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 ZSCAN10Q96SZ4 725 aaPredicted RBP8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 NCOA5Q9HCD5 579 aaKnown RBP8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 GBA2Q9HCG7 927 aaPredicted RBP8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 ZSWIM6Q9HCJ5 1215 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 SWAP70Q9UH65 585 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 BRPF3Q9ULD4 1205 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 PPP2R3BQ9Y5P8 575 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 SNCAIPQ9Y6H5 919 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 KLF18A0A0U1RQI7 1052 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 A0A1W2PRG0 241 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 SH2B2O14492 632 aaPredicted RBP8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 PPP1R12BO60237 982 aaPredicted RBP8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 GOLGA8HP0CJ92 632 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 PSMA5P28066 241 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 SNAP25P60880 206 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 ICA1Q05084 483 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 KRT32Q14532 448 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 WTAPQ15007 396 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 IFIT1BQ5T764 474 aaKnown RBP8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 DHX32Q7L7V1 743 aaKnown RBP8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 CCDC82Q8N4S0 544 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 FEZ1Q99689 392 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 CNNM2Q9H8M5 875 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 LY9Q9HBG7 655 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 CABP5Q9NP86 173 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 PICK1Q9NRD5 415 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 HERC5Q9UII4 1024 aaKnown RBP8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 RBM19Q9Y4C8 960 aaKnown RBP8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 ZHX2Q9Y6X8 837 aa8.89□□□□□ -0.99
SF3A3P1-201ENST00000446317 COL2A1P02458 1487 aaPredicted RBP8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 hCG_1642624A0A1W2PR95 340 aa8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 CCDC69A6NI79 296 aa8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 GOLGA8BA8MQT2 603 aa8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 TOMM70O94826 608 aa8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 TAL1P17542 331 aaPredicted RBP8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 GJA5P36382 358 aa8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 IREB2P48200 963 aaKnown RBP8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 HUNKP57058 714 aa8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 MAP3K9P80192 1104 aa8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 EXOSC10Q01780 885 aaKnown RBP8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 SPP2Q13103 211 aa8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 MTMR2Q13614 643 aa8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 ARMC9Q7Z3E5 817 aa8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 MICU3Q86XE3 530 aa8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 SIAH1Q8IUQ4 282 aa8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 SCYL3Q8IZE3 742 aa8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 C2orf69Q8N8R5 385 aa8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 NEDD1Q8NHV4 660 aa8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 IGDCC4Q8TDY8 1250 aa8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 OPTNQ96CV9 577 aa8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 TMEM47Q9BQJ4 181 aa8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 GPCPD1Q9NPB8 672 aa8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 TPCN1Q9ULQ1 816 aa8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 CSADQ9Y600 493 aa8.88□□□□□ -0.99
SF3A3P1-201ENST00000446317 ERICH2A1L162 156 aa8.87□□□□□ -0.99
SF3A3P1-201ENST00000446317 USP17L5A8MUK1 530 aa8.87□□□□□ -0.99
SF3A3P1-201ENST00000446317 TBC1D12O60347 775 aa8.87□□□□□ -0.99
SF3A3P1-201ENST00000446317 PEX10O60683 326 aa8.87□□□□□ -0.99
SF3A3P1-201ENST00000446317 FGRP09769 529 aa8.87□□□□□ -0.99
SF3A3P1-201ENST00000446317 PTPRAP18433 802 aa8.87□□□□□ -0.99
SF3A3P1-201ENST00000446317 ANAPC15P60006 121 aa8.87□□□□□ -0.99
SF3A3P1-201ENST00000446317 RABEP1Q15276 862 aa8.87□□□□□ -0.99
SF3A3P1-201ENST00000446317 CCDC96Q2M329 555 aa8.87□□□□□ -0.99
SF3A3P1-201ENST00000446317 TSGA10IPQ3SY00 556 aa8.87□□□□□ -0.99
SF3A3P1-201ENST00000446317 RCSD1Q6JBY9 416 aa8.87□□□□□ -0.99
SF3A3P1-201ENST00000446317 USP17L2Q6R6M4 530 aa8.87□□□□□ -0.99
SF3A3P1-201ENST00000446317 GADL1Q6ZQY3 521 aa8.87□□□□□ -0.99
SF3A3P1-201ENST00000446317 TMEM179Q6ZVK1 233 aa8.87□□□□□ -0.99
SF3A3P1-201ENST00000446317 KCTD1Q719H9 257 aa8.87□□□□□ -0.99
SF3A3P1-201ENST00000446317 METTL16Q86W50 562 aaKnown RBP8.87□□□□□ -0.99
SF3A3P1-201ENST00000446317 IQCA1Q86XH1 822 aa8.87□□□□□ -0.99
SF3A3P1-201ENST00000446317 SLC10A4Q96EP9 437 aa8.87□□□□□ -0.99
SF3A3P1-201ENST00000446317 TTC14Q96N46 770 aa8.87□□□□□ -0.99
SF3A3P1-201ENST00000446317 KAT14Q9H8E8 782 aa8.87□□□□□ -0.99
SF3A3P1-201ENST00000446317 ZNF287Q9HBT7 754 aa8.87□□□□□ -0.99
SF3A3P1-201ENST00000446317 MTMR4Q9NYA4 1195 aa8.87□□□□□ -0.99
SF3A3P1-201ENST00000446317 OTOFQ9HC10 1997 aa8.87□□□□□ -0.99
SF3A3P1-201ENST00000446317 IGKV6D-41A0A0C4DH26 115 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms