RNA–Protein interactions for RNA: ENST00000445388.5

SEC22C-208, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22C, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-208ENST00000445388 FEZ1Q99689 392 aa18.36■□□□□ 0.53
SEC22C-208ENST00000445388 A0A1W2PRG0 241 aa18.35■□□□□ 0.53
SEC22C-208ENST00000445388 MINDY4BA8MYZ0 360 aa18.35■□□□□ 0.53
SEC22C-208ENST00000445388 PATL2C9JE40 543 aaKnown RBP18.35■□□□□ 0.53
SEC22C-208ENST00000445388 PEX10O60683 326 aa18.35■□□□□ 0.53
SEC22C-208ENST00000445388 APPP05067 770 aa18.35■□□□□ 0.53
SEC22C-208ENST00000445388 HOXA7P31268 230 aaPredicted RBP18.35■□□□□ 0.53
SEC22C-208ENST00000445388 SBK1Q52WX2 424 aa18.35■□□□□ 0.53
SEC22C-208ENST00000445388 CCDC129Q6ZRS4 1044 aa18.35■□□□□ 0.53
SEC22C-208ENST00000445388 CLEC10AQ8IUN9 316 aa18.35■□□□□ 0.53
SEC22C-208ENST00000445388 ARPP21Q9UBL0 812 aaPredicted RBP18.35■□□□□ 0.53
SEC22C-208ENST00000445388 GNAT2P19087 354 aa18.34■□□□□ 0.53
SEC22C-208ENST00000445388 RGS19P49795 217 aa18.34■□□□□ 0.53
SEC22C-208ENST00000445388 IRX3P78415 501 aaPredicted RBP18.34■□□□□ 0.53
SEC22C-208ENST00000445388 GIMAP6Q6P9H5 292 aa18.34■□□□□ 0.53
SEC22C-208ENST00000445388 SIAH1Q8IUQ4 282 aa18.34■□□□□ 0.53
SEC22C-208ENST00000445388 IFNL3Q8IZI9 196 aa18.34■□□□□ 0.53
SEC22C-208ENST00000445388 KIAA1683Q9H0B3 1180 aa18.34■□□□□ 0.53
SEC22C-208ENST00000445388 SRRDQ9UH36 339 aa18.34■□□□□ 0.53
SEC22C-208ENST00000445388 GNRH1P01148 92 aa18.33■□□□□ 0.52
SEC22C-208ENST00000445388 TDO2P48775 406 aa18.33■□□□□ 0.52
SEC22C-208ENST00000445388 FCGRTP55899 365 aa18.33■□□□□ 0.52
SEC22C-208ENST00000445388 TMEM179Q6ZVK1 233 aa18.33■□□□□ 0.52
SEC22C-208ENST00000445388 C12orf42Q96LP6 360 aa18.33■□□□□ 0.52
SEC22C-208ENST00000445388 GABRQQ9UN88 632 aa18.33■□□□□ 0.52
SEC22C-208ENST00000445388 TRIM6-TRIM34B2RNG4 842 aa18.32■□□□□ 0.52
SEC22C-208ENST00000445388 GCLCP48506 637 aaPredicted RBP18.32■□□□□ 0.52
SEC22C-208ENST00000445388 USP14P54578 494 aa18.32■□□□□ 0.52
SEC22C-208ENST00000445388 FAM110CQ1W6H9 321 aa18.32■□□□□ 0.52
SEC22C-208ENST00000445388 POTEEQ6S8J3 1075 aa18.32■□□□□ 0.52
SEC22C-208ENST00000445388 SH3TC2Q8TF17 1288 aa18.32■□□□□ 0.52
SEC22C-208ENST00000445388 RILPL2Q969X0 211 aa18.32■□□□□ 0.52
SEC22C-208ENST00000445388 CCDC17Q96LX7 622 aa18.32■□□□□ 0.52
SEC22C-208ENST00000445388 TAOK2Q9UL54 1235 aa18.32■□□□□ 0.52
SEC22C-208ENST00000445388 HTTP42858 3142 aa18.32■□□□□ 0.52
SEC22C-208ENST00000445388 MYPNQ86TC9 1320 aa18.31■□□□□ 0.52
SEC22C-208ENST00000445388 FOXP2O15409 715 aa18.31■□□□□ 0.52
SEC22C-208ENST00000445388 VCAM1P19320 739 aa18.31■□□□□ 0.52
SEC22C-208ENST00000445388 HOXD10P28358 340 aa18.31■□□□□ 0.52
SEC22C-208ENST00000445388 HERVK_113P62684 666 aa18.31■□□□□ 0.52
SEC22C-208ENST00000445388 PRKCZQ05513 592 aa18.31■□□□□ 0.52
SEC22C-208ENST00000445388 SLC9C1Q4G0N8 1177 aa18.31■□□□□ 0.52
SEC22C-208ENST00000445388 KIAA1755Q5JYT7 1200 aa18.31■□□□□ 0.52
SEC22C-208ENST00000445388 ARMC5Q96C12 935 aa18.31■□□□□ 0.52
SEC22C-208ENST00000445388 FAM227BQ96M60 508 aa18.31■□□□□ 0.52
SEC22C-208ENST00000445388 OSBPL3Q9H4L5 887 aa18.31■□□□□ 0.52
SEC22C-208ENST00000445388 TXNRD2Q9NNW7 524 aa18.31■□□□□ 0.52
SEC22C-208ENST00000445388 USP17L15C9J2P7 530 aa18.3■□□□□ 0.52
SEC22C-208ENST00000445388 USP17L13C9JLJ4 530 aa18.3■□□□□ 0.52
SEC22C-208ENST00000445388 USP17L11C9JVI0 530 aa18.3■□□□□ 0.52
SEC22C-208ENST00000445388 USP17L18D6R9N7 530 aa18.3■□□□□ 0.52
SEC22C-208ENST00000445388 USP17L22D6RA61 530 aa18.3■□□□□ 0.52
SEC22C-208ENST00000445388 USP17L17D6RBQ6 530 aa18.3■□□□□ 0.52
SEC22C-208ENST00000445388 USP17L19D6RCP7 530 aa18.3■□□□□ 0.52
SEC22C-208ENST00000445388 USP17L20D6RJB6 530 aa18.3■□□□□ 0.52
SEC22C-208ENST00000445388 TNPO2O14787 897 aaKnown RBP18.3■□□□□ 0.52
SEC22C-208ENST00000445388 MYCP01106 439 aaPredicted RBP18.3■□□□□ 0.52
SEC22C-208ENST00000445388 RASA1P20936 1047 aa18.3■□□□□ 0.52
SEC22C-208ENST00000445388 PRMT2P55345 433 aa18.3■□□□□ 0.52
SEC22C-208ENST00000445388 USP17L24Q0WX57 530 aa18.3■□□□□ 0.52
SEC22C-208ENST00000445388 VPS53Q5VIR6 699 aa18.3■□□□□ 0.52
SEC22C-208ENST00000445388 CATSPERGQ6ZRH7 1159 aa18.3■□□□□ 0.52
SEC22C-208ENST00000445388 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.3■□□□□ 0.52
SEC22C-208ENST00000445388 RBPJLQ9UBG7 517 aa18.3■□□□□ 0.52
SEC22C-208ENST00000445388 MORF4L1Q9UBU8 362 aa18.3■□□□□ 0.52
SEC22C-208ENST00000445388 MGAMO43451 1857 aa18.3■□□□□ 0.52
SEC22C-208ENST00000445388 MYH8P13535 1937 aa18.29■□□□□ 0.52
SEC22C-208ENST00000445388 A0A0D9SFI3 127 aa18.29■□□□□ 0.52
SEC22C-208ENST00000445388 POTEFA5A3E0 1075 aa18.29■□□□□ 0.52
SEC22C-208ENST00000445388 PDE4AP27815 886 aa18.29■□□□□ 0.52
SEC22C-208ENST00000445388 ICA1Q05084 483 aa18.29■□□□□ 0.52
SEC22C-208ENST00000445388 Q3C1V9 767 aa18.29■□□□□ 0.52
SEC22C-208ENST00000445388 RAET1EQ8TD07 263 aa18.29■□□□□ 0.52
SEC22C-208ENST00000445388 ZNF333Q96JL9 665 aa18.29■□□□□ 0.52
SEC22C-208ENST00000445388 NACAP1Q9BZK3 213 aa18.29■□□□□ 0.52
SEC22C-208ENST00000445388 RPAP3Q9H6T3 665 aaPredicted RBP18.29■□□□□ 0.52
SEC22C-208ENST00000445388 MKNK2Q9HBH9 465 aa18.29■□□□□ 0.52
SEC22C-208ENST00000445388 HELLSQ9NRZ9 838 aa18.29■□□□□ 0.52
SEC22C-208ENST00000445388 ROBO3Q96MS0 1386 aa18.29■□□□□ 0.52
SEC22C-208ENST00000445388 PRDM1O75626 825 aa18.28■□□□□ 0.52
SEC22C-208ENST00000445388 EEF2P13639 858 aaKnown RBP18.28■□□□□ 0.52
SEC22C-208ENST00000445388 FLT3LGP49771 235 aa18.28■□□□□ 0.52
SEC22C-208ENST00000445388 ATP2B2Q01814 1243 aa18.28■□□□□ 0.52
SEC22C-208ENST00000445388 MLLT1Q03111 559 aaPredicted RBP18.28■□□□□ 0.52
SEC22C-208ENST00000445388 NMIQ13287 307 aaPredicted RBP18.28■□□□□ 0.52
SEC22C-208ENST00000445388 NBPF11Q86T75 865 aa18.28■□□□□ 0.52
SEC22C-208ENST00000445388 PAGR1Q9BTK6 254 aa18.28■□□□□ 0.52
SEC22C-208ENST00000445388 NAPBQ9H115 298 aa18.28■□□□□ 0.52
SEC22C-208ENST00000445388 ARHGEF10LQ9HCE6 1279 aa18.28■□□□□ 0.52
SEC22C-208ENST00000445388 TMX2Q9Y320 296 aa18.28■□□□□ 0.52
SEC22C-208ENST00000445388 MCMDC2Q4G0Z9 681 aa18.27■□□□□ 0.52
SEC22C-208ENST00000445388 SPICE1Q8N0Z3 855 aa18.27■□□□□ 0.52
SEC22C-208ENST00000445388 GPRC5AQ8NFJ5 357 aa18.27■□□□□ 0.52
SEC22C-208ENST00000445388 KANSL2Q9H9L4 492 aa18.27■□□□□ 0.52
SEC22C-208ENST00000445388 CNMDO75829 334 aa18.26■□□□□ 0.51
SEC22C-208ENST00000445388 SDSP20132 328 aa18.26■□□□□ 0.51
SEC22C-208ENST00000445388 GRK4P32298 578 aa18.26■□□□□ 0.51
SEC22C-208ENST00000445388 PPARAQ07869 468 aa18.26■□□□□ 0.51
SEC22C-208ENST00000445388 ZNF589Q86UQ0 364 aaPredicted RBP18.26■□□□□ 0.51
SEC22C-208ENST00000445388 COA7Q96BR5 231 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms