RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 SLC45A1Q9Y2W3 748 aa28.58■■■□□ 2.17
C9orf3-207ENST00000445181 PTCH2Q9Y6C5 1203 aa28.58■■■□□ 2.17
C9orf3-207ENST00000445181 MFAP1P55081 439 aaKnown RBP28.57■■■□□ 2.16
C9orf3-207ENST00000445181 ARMC5Q96C12 935 aa28.57■■■□□ 2.16
C9orf3-207ENST00000445181 WDR18Q9BV38 432 aa28.57■■■□□ 2.16
C9orf3-207ENST00000445181 GNRH1P01148 92 aa28.56■■■□□ 2.16
C9orf3-207ENST00000445181 MYH8P13535 1937 aa28.56■■■□□ 2.16
C9orf3-207ENST00000445181 VPS53Q5VIR6 699 aa28.56■■■□□ 2.16
C9orf3-207ENST00000445181 CCDC171Q6TFL3 1326 aa28.56■■■□□ 2.16
C9orf3-207ENST00000445181 PSMC4P43686 418 aa28.55■■■□□ 2.16
C9orf3-207ENST00000445181 HMGCS2P54868 508 aa28.55■■■□□ 2.16
C9orf3-207ENST00000445181 MTMR2Q13614 643 aa28.55■■■□□ 2.16
C9orf3-207ENST00000445181 ZNF589Q86UQ0 364 aaPredicted RBP28.55■■■□□ 2.16
C9orf3-207ENST00000445181 MKNK2Q9HBH9 465 aa28.55■■■□□ 2.16
C9orf3-207ENST00000445181 AGTPBP1Q9UPW5 1226 aa28.55■■■□□ 2.16
C9orf3-207ENST00000445181 BCRP11274 1271 aa28.54■■■□□ 2.16
C9orf3-207ENST00000445181 CTGFP29279 349 aa28.54■■■□□ 2.16
C9orf3-207ENST00000445181 PTPRFP10586 1907 aa28.53■■■□□ 2.16
C9orf3-207ENST00000445181 ZSWIM8A7E2V4 1837 aa28.53■■■□□ 2.16
C9orf3-207ENST00000445181 USP17L10C9JJH3 530 aa28.53■■■□□ 2.16
C9orf3-207ENST00000445181 FMNL1O95466 1100 aaPredicted RBP28.53■■■□□ 2.16
C9orf3-207ENST00000445181 SLC3A2P08195 630 aaKnown RBP28.53■■■□□ 2.16
C9orf3-207ENST00000445181 PRMT2P55345 433 aa28.53■■■□□ 2.16
C9orf3-207ENST00000445181 BACE1P56817 501 aa28.53■■■□□ 2.16
C9orf3-207ENST00000445181 SLC9C1Q4G0N8 1177 aa28.53■■■□□ 2.16
C9orf3-207ENST00000445181 TREML2Q5T2D2 321 aa28.53■■■□□ 2.16
C9orf3-207ENST00000445181 ERICH6BQ5W0A0 696 aa28.53■■■□□ 2.16
C9orf3-207ENST00000445181 SKAP1Q86WV1 359 aa28.53■■■□□ 2.16
C9orf3-207ENST00000445181 PROCA1Q8NCQ7 364 aaPredicted RBP28.53■■■□□ 2.16
C9orf3-207ENST00000445181 TRIM47Q96LD4 638 aa28.53■■■□□ 2.16
C9orf3-207ENST00000445181 CCDC17Q96LX7 622 aa28.53■■■□□ 2.16
C9orf3-207ENST00000445181 FEZ1Q99689 392 aa28.53■■■□□ 2.16
C9orf3-207ENST00000445181 ZNF287Q9HBT7 754 aa28.53■■■□□ 2.16
C9orf3-207ENST00000445181 TMOD4Q9NZQ9 345 aa28.53■■■□□ 2.16
C9orf3-207ENST00000445181 ROBO3Q96MS0 1386 aa28.52■■■□□ 2.16
C9orf3-207ENST00000445181 FOXP2O15409 715 aa28.52■■■□□ 2.16
C9orf3-207ENST00000445181 AKR1B1P15121 316 aa28.52■■■□□ 2.16
C9orf3-207ENST00000445181 PPARAQ07869 468 aa28.52■■■□□ 2.16
C9orf3-207ENST00000445181 SEPT2Q15019 361 aa28.52■■■□□ 2.16
C9orf3-207ENST00000445181 TMEM179Q6ZVK1 233 aa28.52■■■□□ 2.16
C9orf3-207ENST00000445181 NBPF11Q86T75 865 aa28.52■■■□□ 2.16
C9orf3-207ENST00000445181 HSPD1P10809 573 aaKnown RBP28.51■■■□□ 2.15
C9orf3-207ENST00000445181 SMCR8Q8TEV9 937 aaPredicted RBP28.51■■■□□ 2.15
C9orf3-207ENST00000445181 PPP4R2Q9NY27 417 aa28.51■■■□□ 2.15
C9orf3-207ENST00000445181 C19orf81C9J6K1 198 aa28.5■■■□□ 2.15
C9orf3-207ENST00000445181 HOXD10P28358 340 aa28.5■■■□□ 2.15
C9orf3-207ENST00000445181 GUCY1A2P33402 732 aa28.5■■■□□ 2.15
C9orf3-207ENST00000445181 SRRDQ9UH36 339 aa28.5■■■□□ 2.15
C9orf3-207ENST00000445181 HTTP42858 3142 aa28.49■■■□□ 2.15
C9orf3-207ENST00000445181 POTEFA5A3E0 1075 aa28.49■■■□□ 2.15
C9orf3-207ENST00000445181 OSBPP22059 807 aa28.49■■■□□ 2.15
C9orf3-207ENST00000445181 PDE4BQ07343 736 aa28.49■■■□□ 2.15
C9orf3-207ENST00000445181 ALX1Q15699 326 aa28.49■■■□□ 2.15
C9orf3-207ENST00000445181 ZYXQ15942 572 aaKnown RBP28.49■■■□□ 2.15
C9orf3-207ENST00000445181 SH3D19Q5HYK7 790 aa28.49■■■□□ 2.15
C9orf3-207ENST00000445181 ZNF333Q96JL9 665 aa28.49■■■□□ 2.15
C9orf3-207ENST00000445181 PNMA3Q9UL41 463 aa28.49■■■□□ 2.15
C9orf3-207ENST00000445181 PRDM1O75626 825 aa28.48■■■□□ 2.15
C9orf3-207ENST00000445181 FGAP02671 866 aa28.48■■■□□ 2.15
C9orf3-207ENST00000445181 FCGRTP55899 365 aa28.48■■■□□ 2.15
C9orf3-207ENST00000445181 PABPC4Q13310 644 aaKnown RBP eCLIP28.48■■■□□ 2.15
C9orf3-207ENST00000445181 USP17L2Q6R6M4 530 aa28.48■■■□□ 2.15
C9orf3-207ENST00000445181 ZNF444Q8N0Y2 327 aaPredicted RBP28.48■■■□□ 2.15
C9orf3-207ENST00000445181 USP14P54578 494 aa28.47■■■□□ 2.15
C9orf3-207ENST00000445181 ACER1Q8TDN7 264 aa28.47■■■□□ 2.15
C9orf3-207ENST00000445181 SH3TC2Q8TF17 1288 aa28.47■■■□□ 2.15
C9orf3-207ENST00000445181 RUFY2Q8WXA3 655 aa28.47■■■□□ 2.15
C9orf3-207ENST00000445181 RASA1P20936 1047 aa28.46■■■□□ 2.15
C9orf3-207ENST00000445181 CHMLP26374 656 aa28.46■■■□□ 2.15
C9orf3-207ENST00000445181 ICA1Q05084 483 aa28.46■■■□□ 2.15
C9orf3-207ENST00000445181 CTDSPL2Q05D32 466 aa28.46■■■□□ 2.15
C9orf3-207ENST00000445181 TMEM106CQ9BVX2 250 aa28.46■■■□□ 2.15
C9orf3-207ENST00000445181 MYPNQ86TC9 1320 aa28.45■■■□□ 2.15
C9orf3-207ENST00000445181 LOC285556D6RIA3 1793 aa28.45■■■□□ 2.15
C9orf3-207ENST00000445181 ATP2B2Q01814 1243 aa28.45■■■□□ 2.14
C9orf3-207ENST00000445181 KIAA1683Q9H0B3 1180 aa28.45■■■□□ 2.14
C9orf3-207ENST00000445181 ARHGEF10LQ9HCE6 1279 aa28.45■■■□□ 2.14
C9orf3-207ENST00000445181 ZMYM6O95789 1325 aa28.44■■■□□ 2.14
C9orf3-207ENST00000445181 TNRC18O15417 2968 aaPredicted RBP28.44■■■□□ 2.14
C9orf3-207ENST00000445181 MYCP01106 439 aaPredicted RBP28.44■■■□□ 2.14
C9orf3-207ENST00000445181 CLEC10AQ8IUN9 316 aa28.44■■■□□ 2.14
C9orf3-207ENST00000445181 ANKRD13CQ8N6S4 541 aa28.44■■■□□ 2.14
C9orf3-207ENST00000445181 RAET1EQ8TD07 263 aa28.44■■■□□ 2.14
C9orf3-207ENST00000445181 ASCC2Q9H1I8 757 aaPredicted RBP28.44■■■□□ 2.14
C9orf3-207ENST00000445181 KANSL2Q9H9L4 492 aa28.44■■■□□ 2.14
C9orf3-207ENST00000445181 EMILIN3Q9NT22 766 aa28.44■■■□□ 2.14
C9orf3-207ENST00000445181 RAD50Q92878 1312 aa28.43■■■□□ 2.14
C9orf3-207ENST00000445181 SH2D4AQ9H788 454 aa28.43■■■□□ 2.14
C9orf3-207ENST00000445181 ANAPC4Q9UJX5 808 aa28.43■■■□□ 2.14
C9orf3-207ENST00000445181 EN2P19622 333 aaPredicted RBP28.42■■■□□ 2.14
C9orf3-207ENST00000445181 GCLCP48506 637 aaPredicted RBP28.42■■■□□ 2.14
C9orf3-207ENST00000445181 PRKCZQ05513 592 aa28.42■■■□□ 2.14
C9orf3-207ENST00000445181 BMP2KLQ5H9B9 411 aa28.42■■■□□ 2.14
C9orf3-207ENST00000445181 A0A1W2PRG0 241 aa28.41■■■□□ 2.14
C9orf3-207ENST00000445181 TSPY3P0CV98 308 aa28.41■■■□□ 2.14
C9orf3-207ENST00000445181 TSPY8P0CW00 308 aa28.41■■■□□ 2.14
C9orf3-207ENST00000445181 HAND2P61296 217 aa28.41■■■□□ 2.14
C9orf3-207ENST00000445181 IRX3P78415 501 aaPredicted RBP28.41■■■□□ 2.14
C9orf3-207ENST00000445181 DSCC1Q9BVC3 393 aa28.41■■■□□ 2.14
C9orf3-207ENST00000445181 IL25Q9H293 177 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms