RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 NACAP1Q9BZK3 213 aa22.29■■□□□ 1.16
CCDC188-202ENST00000444532 ARHGAP39Q9C0H5 1083 aa22.29■■□□□ 1.16
CCDC188-202ENST00000444532 KIAA1683Q9H0B3 1180 aa22.29■■□□□ 1.16
CCDC188-202ENST00000444532 EMILIN3Q9NT22 766 aa22.29■■□□□ 1.16
CCDC188-202ENST00000444532 TRIM6-TRIM34B2RNG4 842 aa22.28■■□□□ 1.16
CCDC188-202ENST00000444532 SMIM22K7EJ46 135 aa22.28■■□□□ 1.16
CCDC188-202ENST00000444532 PSMC4P43686 418 aa22.28■■□□□ 1.16
CCDC188-202ENST00000444532 TDO2P48775 406 aa22.28■■□□□ 1.16
CCDC188-202ENST00000444532 PRMT2P55345 433 aa22.28■■□□□ 1.16
CCDC188-202ENST00000444532 IFNL3Q8IZI9 196 aa22.28■■□□□ 1.16
CCDC188-202ENST00000444532 EPB41L4AQ9HCS5 686 aaPredicted RBP22.28■■□□□ 1.16
CCDC188-202ENST00000444532 HELLSQ9NRZ9 838 aa22.28■■□□□ 1.16
CCDC188-202ENST00000444532 ZSWIM8A7E2V4 1837 aa22.27■■□□□ 1.16
CCDC188-202ENST00000444532 MINDY4BA8MYZ0 360 aa22.27■■□□□ 1.16
CCDC188-202ENST00000444532 MGAMO43451 1857 aa22.27■■□□□ 1.16
CCDC188-202ENST00000444532 HOXD10P28358 340 aa22.27■■□□□ 1.16
CCDC188-202ENST00000444532 IRX3P78415 501 aaPredicted RBP22.27■■□□□ 1.16
CCDC188-202ENST00000444532 ACER1Q8TDN7 264 aa22.27■■□□□ 1.16
CCDC188-202ENST00000444532 FMNL1O95466 1100 aaPredicted RBP22.26■■□□□ 1.15
CCDC188-202ENST00000444532 AKR1B1P15121 316 aa22.26■■□□□ 1.15
CCDC188-202ENST00000444532 ANKRD13CQ8N6S4 541 aa22.26■■□□□ 1.15
CCDC188-202ENST00000444532 RILPL2Q969X0 211 aa22.26■■□□□ 1.15
CCDC188-202ENST00000444532 TRIM47Q96LD4 638 aa22.26■■□□□ 1.15
CCDC188-202ENST00000444532 ROBO3Q96MS0 1386 aa22.25■■□□□ 1.15
CCDC188-202ENST00000444532 CTGFP29279 349 aa22.25■■□□□ 1.15
CCDC188-202ENST00000444532 FCGRTP55899 365 aa22.25■■□□□ 1.15
CCDC188-202ENST00000444532 ZYXQ15942 572 aaKnown RBP22.25■■□□□ 1.15
CCDC188-202ENST00000444532 FAM110CQ1W6H9 321 aa22.25■■□□□ 1.15
CCDC188-202ENST00000444532 NAPBQ9H115 298 aa22.25■■□□□ 1.15
CCDC188-202ENST00000444532 ZNF287Q9HBT7 754 aa22.25■■□□□ 1.15
CCDC188-202ENST00000444532 MCMDC2Q4G0Z9 681 aa22.24■■□□□ 1.15
CCDC188-202ENST00000444532 P2RX7Q99572 595 aaKnown RBP22.24■■□□□ 1.15
CCDC188-202ENST00000444532 MKNK2Q9HBH9 465 aa22.24■■□□□ 1.15
CCDC188-202ENST00000444532 ARHGEF10LQ9HCE6 1279 aa22.24■■□□□ 1.15
CCDC188-202ENST00000444532 SRRDQ9UH36 339 aa22.24■■□□□ 1.15
CCDC188-202ENST00000444532 A0A1W2PRG0 241 aa22.23■■□□□ 1.15
CCDC188-202ENST00000444532 USP17L15C9J2P7 530 aa22.23■■□□□ 1.15
CCDC188-202ENST00000444532 USP17L13C9JLJ4 530 aa22.23■■□□□ 1.15
CCDC188-202ENST00000444532 USP17L11C9JVI0 530 aa22.23■■□□□ 1.15
CCDC188-202ENST00000444532 USP17L18D6R9N7 530 aa22.23■■□□□ 1.15
CCDC188-202ENST00000444532 USP17L22D6RA61 530 aa22.23■■□□□ 1.15
CCDC188-202ENST00000444532 USP17L17D6RBQ6 530 aa22.23■■□□□ 1.15
CCDC188-202ENST00000444532 USP17L19D6RCP7 530 aa22.23■■□□□ 1.15
CCDC188-202ENST00000444532 USP17L20D6RJB6 530 aa22.23■■□□□ 1.15
CCDC188-202ENST00000444532 USP17L24Q0WX57 530 aa22.23■■□□□ 1.15
CCDC188-202ENST00000444532 CCDC129Q6ZRS4 1044 aa22.23■■□□□ 1.15
CCDC188-202ENST00000444532 GTF3C2Q8WUA4 911 aaPredicted RBP22.23■■□□□ 1.15
CCDC188-202ENST00000444532 SH2D4AQ9H788 454 aa22.23■■□□□ 1.15
CCDC188-202ENST00000444532 KANSL2Q9H9L4 492 aa22.23■■□□□ 1.15
CCDC188-202ENST00000444532 PTCH2Q9Y6C5 1203 aa22.23■■□□□ 1.15
CCDC188-202ENST00000444532 ECM2O94769 699 aaPredicted RBP22.22■■□□□ 1.15
CCDC188-202ENST00000444532 HERVK_113P62684 666 aa22.22■■□□□ 1.15
CCDC188-202ENST00000444532 ICA1Q05084 483 aa22.22■■□□□ 1.15
CCDC188-202ENST00000444532 SIAH1Q8IUQ4 282 aa22.22■■□□□ 1.15
CCDC188-202ENST00000444532 FAM227BQ96M60 508 aa22.22■■□□□ 1.15
CCDC188-202ENST00000444532 MORF4L1Q9UBU8 362 aa22.22■■□□□ 1.15
CCDC188-202ENST00000444532 A0A0D9SFI3 127 aa22.21■■□□□ 1.15
CCDC188-202ENST00000444532 SLC3A2P08195 630 aaKnown RBP22.21■■□□□ 1.15
CCDC188-202ENST00000444532 VCAM1P19320 739 aa22.21■■□□□ 1.15
CCDC188-202ENST00000444532 SDSP20132 328 aa22.21■■□□□ 1.15
CCDC188-202ENST00000444532 RASA1P20936 1047 aa22.21■■□□□ 1.15
CCDC188-202ENST00000444532 RGS19P49795 217 aa22.21■■□□□ 1.15
CCDC188-202ENST00000444532 CATSPERGQ6ZRH7 1159 aa22.21■■□□□ 1.15
CCDC188-202ENST00000444532 NBPF11Q86T75 865 aa22.21■■□□□ 1.15
CCDC188-202ENST00000444532 ARMC5Q96C12 935 aa22.21■■□□□ 1.15
CCDC188-202ENST00000444532 TMX2Q9Y320 296 aa22.21■■□□□ 1.15
CCDC188-202ENST00000444532 FOXP2O15409 715 aa22.2■■□□□ 1.14
CCDC188-202ENST00000444532 PDE4AP27815 886 aa22.2■■□□□ 1.14
CCDC188-202ENST00000444532 PDE4BQ07343 736 aa22.2■■□□□ 1.14
CCDC188-202ENST00000444532 NMIQ13287 307 aaPredicted RBP22.2■■□□□ 1.14
CCDC188-202ENST00000444532 ALX1Q15699 326 aa22.2■■□□□ 1.14
CCDC188-202ENST00000444532 SLC9C1Q4G0N8 1177 aa22.2■■□□□ 1.14
CCDC188-202ENST00000444532 ZNF444Q8N0Y2 327 aaPredicted RBP22.2■■□□□ 1.14
CCDC188-202ENST00000444532 STK11IPQ8N1F8 1099 aa22.2■■□□□ 1.14
CCDC188-202ENST00000444532 LPAR1Q92633 364 aa22.2■■□□□ 1.14
CCDC188-202ENST00000444532 GREB1LQ9C091 1923 aaPredicted RBP22.19■■□□□ 1.14
CCDC188-202ENST00000444532 HIP1O00291 1037 aa22.19■■□□□ 1.14
CCDC188-202ENST00000444532 TNPO2O14787 897 aaKnown RBP22.19■■□□□ 1.14
CCDC188-202ENST00000444532 MFAP1P55081 439 aaKnown RBP22.19■■□□□ 1.14
CCDC188-202ENST00000444532 PPARAQ07869 468 aa22.19■■□□□ 1.14
CCDC188-202ENST00000444532 GPRC5AQ8NFJ5 357 aa22.19■■□□□ 1.14
CCDC188-202ENST00000444532 COA7Q96BR5 231 aa22.19■■□□□ 1.14
CCDC188-202ENST00000444532 RPAP3Q9H6T3 665 aaPredicted RBP22.19■■□□□ 1.14
CCDC188-202ENST00000444532 MYPNQ86TC9 1320 aa22.19■■□□□ 1.14
CCDC188-202ENST00000444532 EEF2P13639 858 aaKnown RBP22.18■■□□□ 1.14
CCDC188-202ENST00000444532 VPS53Q5VIR6 699 aa22.18■■□□□ 1.14
CCDC188-202ENST00000444532 CLEC10AQ8IUN9 316 aa22.18■■□□□ 1.14
CCDC188-202ENST00000444532 RAET1EQ8TD07 263 aa22.18■■□□□ 1.14
CCDC188-202ENST00000444532 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.18■■□□□ 1.14
CCDC188-202ENST00000444532 VCPKMTQ9H867 229 aa22.18■■□□□ 1.14
CCDC188-202ENST00000444532 RBPJLQ9UBG7 517 aa22.18■■□□□ 1.14
CCDC188-202ENST00000444532 HTTP42858 3142 aa22.17■■□□□ 1.14
CCDC188-202ENST00000444532 SOX10P56693 466 aa22.17■■□□□ 1.14
CCDC188-202ENST00000444532 LBX2Q6XYB7 198 aa22.17■■□□□ 1.14
CCDC188-202ENST00000444532 ANAPC4Q9UJX5 808 aa22.17■■□□□ 1.14
CCDC188-202ENST00000444532 RABGAP1Q9Y3P9 1069 aa22.17■■□□□ 1.14
CCDC188-202ENST00000444532 CCDC171Q6TFL3 1326 aa22.16■■□□□ 1.14
CCDC188-202ENST00000444532 PRDM1O75626 825 aa22.16■■□□□ 1.14
CCDC188-202ENST00000444532 HSPD1P10809 573 aaKnown RBP22.16■■□□□ 1.14
CCDC188-202ENST00000444532 ATP2B2Q01814 1243 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms