RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 USP17L5A8MUK1 530 aa17.99■□□□□ 0.47
SYNCRIP-203ENST00000444272 IGHA2P01877 340 aa17.99■□□□□ 0.47
SYNCRIP-203ENST00000444272 SLC5A1P13866 664 aa17.99■□□□□ 0.47
SYNCRIP-203ENST00000444272 ZEB1P37275 1124 aaPredicted RBP17.99■□□□□ 0.47
SYNCRIP-203ENST00000444272 PTPN5P54829 565 aa17.99■□□□□ 0.47
SYNCRIP-203ENST00000444272 CCDC30Q5VVM6 783 aa17.99■□□□□ 0.47
SYNCRIP-203ENST00000444272 TMEM199Q8N511 208 aa17.99■□□□□ 0.47
SYNCRIP-203ENST00000444272 TOX2Q96NM4 488 aa17.99■□□□□ 0.47
SYNCRIP-203ENST00000444272 PUS3Q9BZE2 481 aaKnown RBP17.99■□□□□ 0.47
SYNCRIP-203ENST00000444272 MTIF3Q9H2K0 278 aaKnown RBP17.99■□□□□ 0.47
SYNCRIP-203ENST00000444272 CERS4Q9HA82 394 aa17.99■□□□□ 0.47
SYNCRIP-203ENST00000444272 GRB14Q14449 540 aa17.98■□□□□ 0.47
SYNCRIP-203ENST00000444272 GTF3C2Q8WUA4 911 aaPredicted RBP17.98■□□□□ 0.47
SYNCRIP-203ENST00000444272 MFSD14AQ96MC6 490 aa17.98■□□□□ 0.47
SYNCRIP-203ENST00000444272 AS3MTQ9HBK9 375 aa17.98■□□□□ 0.47
SYNCRIP-203ENST00000444272 IVNS1ABPQ9Y6Y0 642 aa17.98■□□□□ 0.47
SYNCRIP-203ENST00000444272 RFX7Q2KHR2 1363 aa17.98■□□□□ 0.47
SYNCRIP-203ENST00000444272 PRDX5P30044 214 aa17.97■□□□□ 0.47
SYNCRIP-203ENST00000444272 CCNA1P78396 465 aa17.97■□□□□ 0.47
SYNCRIP-203ENST00000444272 PICALMQ13492 652 aa17.97■□□□□ 0.47
SYNCRIP-203ENST00000444272 SAMD1Q6SPF0 538 aaPredicted RBP17.97■□□□□ 0.47
SYNCRIP-203ENST00000444272 DDX4Q9NQI0 724 aaKnown RBP17.97■□□□□ 0.47
SYNCRIP-203ENST00000444272 BAHCC1Q9P281 2608 aa17.96■□□□□ 0.47
SYNCRIP-203ENST00000444272 DMDP11532 3685 aa17.96■□□□□ 0.47
SYNCRIP-203ENST00000444272 EPOPA6NHQ4 379 aa17.96■□□□□ 0.47
SYNCRIP-203ENST00000444272 BACE1P56817 501 aa17.96■□□□□ 0.47
SYNCRIP-203ENST00000444272 EPHA10Q5JZY3 1008 aa17.96■□□□□ 0.47
SYNCRIP-203ENST00000444272 PRAMEF19Q5SWL8 479 aa17.96■□□□□ 0.47
SYNCRIP-203ENST00000444272 WDR66Q8TBY9 1149 aa17.96■□□□□ 0.47
SYNCRIP-203ENST00000444272 PPP1R12CQ9BZL4 782 aa17.96■□□□□ 0.47
SYNCRIP-203ENST00000444272 XPNPEP3Q9NQH7 507 aa17.96■□□□□ 0.47
SYNCRIP-203ENST00000444272 KMT2BQ9UMN6 2715 aaPredicted RBP17.96■□□□□ 0.47
SYNCRIP-203ENST00000444272 TBC1D12O60347 775 aa17.95■□□□□ 0.46
SYNCRIP-203ENST00000444272 CNMDO75829 334 aa17.95■□□□□ 0.46
SYNCRIP-203ENST00000444272 CAP2P40123 477 aa17.95■□□□□ 0.46
SYNCRIP-203ENST00000444272 RRP1BQ14684 758 aaKnown RBP17.95■□□□□ 0.46
SYNCRIP-203ENST00000444272 C8orf58Q8NAV2 365 aa17.95■□□□□ 0.46
SYNCRIP-203ENST00000444272 IL23AQ9NPF7 189 aa17.95■□□□□ 0.46
SYNCRIP-203ENST00000444272 PCDHA11Q9Y5I1 949 aa17.95■□□□□ 0.46
SYNCRIP-203ENST00000444272 EPG5Q9HCE0 2579 aa17.94■□□□□ 0.46
SYNCRIP-203ENST00000444272 POTEB3A0JP26 581 aa17.94■□□□□ 0.46
SYNCRIP-203ENST00000444272 PGK1P00558 417 aa17.94■□□□□ 0.46
SYNCRIP-203ENST00000444272 FGBP02675 491 aa17.94■□□□□ 0.46
SYNCRIP-203ENST00000444272 IL9P15248 144 aa17.94■□□□□ 0.46
SYNCRIP-203ENST00000444272 OLFML2BQ68BL8 750 aa17.94■□□□□ 0.46
SYNCRIP-203ENST00000444272 POTEBQ6S5H4 581 aa17.94■□□□□ 0.46
SYNCRIP-203ENST00000444272 OTOP2Q7RTS6 562 aa17.94■□□□□ 0.46
SYNCRIP-203ENST00000444272 RNF180Q86T96 592 aa17.94■□□□□ 0.46
SYNCRIP-203ENST00000444272 DPP9Q86TI2 863 aa17.94■□□□□ 0.46
SYNCRIP-203ENST00000444272 CCDC146Q8IYE0 955 aa17.94■□□□□ 0.46
SYNCRIP-203ENST00000444272 STARD7Q9NQZ5 370 aa17.94■□□□□ 0.46
SYNCRIP-203ENST00000444272 FAM86C1Q9NVL1 165 aa17.94■□□□□ 0.46
SYNCRIP-203ENST00000444272 RABGAP1Q9Y3P9 1069 aa17.94■□□□□ 0.46
SYNCRIP-203ENST00000444272 SMCHD1A6NHR9 2005 aa17.94■□□□□ 0.46
SYNCRIP-203ENST00000444272 MROH5Q6ZUA9 1318 aa17.94■□□□□ 0.46
SYNCRIP-203ENST00000444272 MYH2Q9UKX2 1941 aa17.94■□□□□ 0.46
SYNCRIP-203ENST00000444272 IER5LQ5T953 404 aa17.93■□□□□ 0.46
SYNCRIP-203ENST00000444272 G2E3Q7L622 706 aa17.93■□□□□ 0.46
SYNCRIP-203ENST00000444272 SLC4A2P04920 1241 aa17.92■□□□□ 0.46
SYNCRIP-203ENST00000444272 RARBP10826 455 aa17.92■□□□□ 0.46
SYNCRIP-203ENST00000444272 TRIM26Q12899 539 aaPredicted RBP17.92■□□□□ 0.46
SYNCRIP-203ENST00000444272 WDR18Q9BV38 432 aa17.92■□□□□ 0.46
SYNCRIP-203ENST00000444272 ZNF236Q9UL36 1845 aa17.91■□□□□ 0.46
SYNCRIP-203ENST00000444272 COL4A4P53420 1690 aaPredicted RBP17.91■□□□□ 0.46
SYNCRIP-203ENST00000444272 PTPRZ1P23471 2315 aaPredicted RBP17.91■□□□□ 0.46
SYNCRIP-203ENST00000444272 LDHBP07195 334 aaKnown RBP17.91■□□□□ 0.46
SYNCRIP-203ENST00000444272 CA3P07451 260 aa17.91■□□□□ 0.46
SYNCRIP-203ENST00000444272 LINS1Q8NG48 757 aa17.91■□□□□ 0.46
SYNCRIP-203ENST00000444272 ARNTL2Q8WYA1 636 aa17.91■□□□□ 0.46
SYNCRIP-203ENST00000444272 ZNF853P0CG23 659 aa17.9■□□□□ 0.46
SYNCRIP-203ENST00000444272 TCF15Q12870 199 aa17.9■□□□□ 0.46
SYNCRIP-203ENST00000444272 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.9■□□□□ 0.46
SYNCRIP-203ENST00000444272 CHMP4AQ9BY43 222 aa17.9■□□□□ 0.46
SYNCRIP-203ENST00000444272 UBE2ZQ9H832 354 aaPredicted RBP17.9■□□□□ 0.46
SYNCRIP-203ENST00000444272 SLC4A7Q9Y6M7 1214 aa17.9■□□□□ 0.46
SYNCRIP-203ENST00000444272 GAKO14976 1311 aa17.9■□□□□ 0.46
SYNCRIP-203ENST00000444272 C19orf81C9J6K1 198 aa17.89■□□□□ 0.45
SYNCRIP-203ENST00000444272 ADORA2AP29274 412 aa17.89■□□□□ 0.45
SYNCRIP-203ENST00000444272 CYP2C18P33260 490 aa17.89■□□□□ 0.45
SYNCRIP-203ENST00000444272 METTL24Q5JXM2 366 aa17.89■□□□□ 0.45
SYNCRIP-203ENST00000444272 NUP133Q8WUM0 1156 aa17.89■□□□□ 0.45
SYNCRIP-203ENST00000444272 STK31Q9BXU1 1019 aa17.89■□□□□ 0.45
SYNCRIP-203ENST00000444272 DNAH14Q0VDD8 3507 aa17.89■□□□□ 0.45
SYNCRIP-203ENST00000444272 USP17L10C9JJH3 530 aa17.88■□□□□ 0.45
SYNCRIP-203ENST00000444272 GRB10Q13322 594 aa17.88■□□□□ 0.45
SYNCRIP-203ENST00000444272 LEXMQ3ZCV2 418 aa17.88■□□□□ 0.45
SYNCRIP-203ENST00000444272 TMEM67Q5HYA8 995 aa17.88■□□□□ 0.45
SYNCRIP-203ENST00000444272 DNAAF4Q8WXU2 420 aa17.88■□□□□ 0.45
SYNCRIP-203ENST00000444272 MROH7Q68CQ1 1323 aa17.88■□□□□ 0.45
SYNCRIP-203ENST00000444272 ZBBXA8MT70 800 aa17.87■□□□□ 0.45
SYNCRIP-203ENST00000444272 ID4P47928 161 aa17.87■□□□□ 0.45
SYNCRIP-203ENST00000444272 ACLYP53396 1101 aa17.87■□□□□ 0.45
SYNCRIP-203ENST00000444272 PTCRAQ6ISU1 281 aaPredicted RBP17.87■□□□□ 0.45
SYNCRIP-203ENST00000444272 BTBD7Q9P203 1132 aa17.87■□□□□ 0.45
SYNCRIP-203ENST00000444272 PDE8BO95263 885 aa17.86■□□□□ 0.45
SYNCRIP-203ENST00000444272 ATP2A2P16615 1042 aaKnown RBP17.86■□□□□ 0.45
SYNCRIP-203ENST00000444272 KCNA5P22460 613 aa17.86■□□□□ 0.45
SYNCRIP-203ENST00000444272 LRRC24Q50LG9 513 aa17.86■□□□□ 0.45
SYNCRIP-203ENST00000444272 TSPYL6Q8N831 410 aa17.86■□□□□ 0.45
SYNCRIP-203ENST00000444272 VGLL2Q8N8G2 317 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms