RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 IQUBQ8NA54 791 aa13.15□□□□□ -0.3
HCFC1-203ENST00000444191 TRIM66O15016 1216 aa13.14□□□□□ -0.31
HCFC1-203ENST00000444191 PLEKHA8P1O95397 391 aa13.14□□□□□ -0.31
HCFC1-203ENST00000444191 ADAMTS2O95450 1211 aa13.14□□□□□ -0.31
HCFC1-203ENST00000444191 SPA17Q15506 151 aa13.14□□□□□ -0.31
HCFC1-203ENST00000444191 NELFBQ8WX92 580 aa13.14□□□□□ -0.31
HCFC1-203ENST00000444191 GPR108Q9NPR9 543 aa13.14□□□□□ -0.31
HCFC1-203ENST00000444191 HDAC6Q9UBN7 1215 aa13.14□□□□□ -0.31
HCFC1-203ENST00000444191 HEG1Q9ULI3 1381 aa13.14□□□□□ -0.31
HCFC1-203ENST00000444191 N4BP1O75113 896 aaKnown RBP13.14□□□□□ -0.31
HCFC1-203ENST00000444191 TUBB4AP04350 444 aa13.14□□□□□ -0.31
HCFC1-203ENST00000444191 TC2NQ8N9U0 490 aa13.14□□□□□ -0.31
HCFC1-203ENST00000444191 CTAGE1Q96RT6 745 aa13.14□□□□□ -0.31
HCFC1-203ENST00000444191 MMRN2Q9H8L6 949 aa13.14□□□□□ -0.31
HCFC1-203ENST00000444191 POLD4Q9HCU8 107 aa13.14□□□□□ -0.31
HCFC1-203ENST00000444191 AATFQ9NY61 560 aaKnown RBP eCLIP13.14□□□□□ -0.31
HCFC1-203ENST00000444191 TFCP2L1Q9NZI6 479 aa13.14□□□□□ -0.31
HCFC1-203ENST00000444191 TRIM10Q9UDY6 481 aa13.14□□□□□ -0.31
HCFC1-203ENST00000444191 C3P01024 1663 aa13.14□□□□□ -0.31
HCFC1-203ENST00000444191 USP17L12C9JPN9 530 aa13.14□□□□□ -0.31
HCFC1-203ENST00000444191 USP17L21D6R901 530 aa13.14□□□□□ -0.31
HCFC1-203ENST00000444191 PLCD1P51178 756 aa13.14□□□□□ -0.31
HCFC1-203ENST00000444191 CAVIN4Q5BKX8 364 aa13.14□□□□□ -0.31
HCFC1-203ENST00000444191 LPIN2Q92539 896 aa13.14□□□□□ -0.31
HCFC1-203ENST00000444191 AKR1B10O60218 316 aa13.13□□□□□ -0.31
HCFC1-203ENST00000444191 NMT2O60551 498 aa13.13□□□□□ -0.31
HCFC1-203ENST00000444191 CYP27A1Q02318 531 aa13.13□□□□□ -0.31
HCFC1-203ENST00000444191 PPARAQ07869 468 aa13.13□□□□□ -0.31
HCFC1-203ENST00000444191 SF3A3Q12874 501 aaKnown RBP eCLIP13.13□□□□□ -0.311e-9■■■■■ 62
HCFC1-203ENST00000444191 RAD9BQ6WBX8 426 aa13.13□□□□□ -0.31
HCFC1-203ENST00000444191 TSPYL1Q9H0U9 437 aa13.13□□□□□ -0.31
HCFC1-203ENST00000444191 GDAQ9Y2T3 454 aa13.13□□□□□ -0.31
HCFC1-203ENST00000444191 SPATA31D1Q6ZQQ2 1576 aa13.13□□□□□ -0.31
HCFC1-203ENST00000444191 TRIM49BA6NDI0 452 aa13.13□□□□□ -0.31
HCFC1-203ENST00000444191 H2AFXP16104 143 aaPredicted RBP13.13□□□□□ -0.31
HCFC1-203ENST00000444191 ASIC1P78348 528 aa13.13□□□□□ -0.31
HCFC1-203ENST00000444191 SRGAP1Q7Z6B7 1085 aa13.13□□□□□ -0.31
HCFC1-203ENST00000444191 GBP3Q9H0R5 595 aa13.13□□□□□ -0.31
HCFC1-203ENST00000444191 L2HGDHQ9H9P8 463 aa13.13□□□□□ -0.31
HCFC1-203ENST00000444191 KIF13AQ9H1H9 1805 aa13.13□□□□□ -0.31
HCFC1-203ENST00000444191 NUTM2BA6NNL0 878 aaPredicted RBP13.13□□□□□ -0.31
HCFC1-203ENST00000444191 NUTM2EB1AL46 878 aaPredicted RBP13.13□□□□□ -0.31
HCFC1-203ENST00000444191 CIAO1O76071 339 aa13.13□□□□□ -0.31
HCFC1-203ENST00000444191 CLSTN1O94985 981 aa13.13□□□□□ -0.31
HCFC1-203ENST00000444191 PCCAP05165 728 aaPredicted RBP13.13□□□□□ -0.31
HCFC1-203ENST00000444191 PAK1Q13153 545 aa13.13□□□□□ -0.31
HCFC1-203ENST00000444191 SPATA1Q5VX52 437 aa13.13□□□□□ -0.31
HCFC1-203ENST00000444191 TRIM65Q6PJ69 517 aa13.13□□□□□ -0.31
HCFC1-203ENST00000444191 RABGGTAQ92696 567 aa13.13□□□□□ -0.31
HCFC1-203ENST00000444191 CDC23Q9UJX2 597 aa13.13□□□□□ -0.31
HCFC1-203ENST00000444191 PALLDQ8WX93 1383 aa13.12□□□□□ -0.31
HCFC1-203ENST00000444191 SASH3O75995 380 aa13.12□□□□□ -0.31
HCFC1-203ENST00000444191 FMNL1O95466 1100 aaPredicted RBP13.12□□□□□ -0.31
HCFC1-203ENST00000444191 BMP6P22004 513 aa13.12□□□□□ -0.31
HCFC1-203ENST00000444191 RAD51AP2Q09MP3 1159 aa13.12□□□□□ -0.31
HCFC1-203ENST00000444191 TMTC2Q8N394 836 aa13.12□□□□□ -0.31
HCFC1-203ENST00000444191 RASSF4Q9H2L5 321 aa13.12□□□□□ -0.31
HCFC1-203ENST00000444191 MCM9Q9NXL9 1143 aa13.12□□□□□ -0.31
HCFC1-203ENST00000444191 PDE8AO60658 829 aa13.12□□□□□ -0.31
HCFC1-203ENST00000444191 PTPREP23469 700 aa13.12□□□□□ -0.31
HCFC1-203ENST00000444191 TBC1D8BQ0IIM8 1120 aa13.12□□□□□ -0.31
HCFC1-203ENST00000444191 CACNA2D4Q7Z3S7 1137 aa13.12□□□□□ -0.31
HCFC1-203ENST00000444191 NLRP10Q86W26 655 aa13.12□□□□□ -0.31
HCFC1-203ENST00000444191 CRACR2BQ8N4Y2 399 aaPredicted RBP13.12□□□□□ -0.31
HCFC1-203ENST00000444191 ENOX1Q8TC92 643 aaKnown RBP13.12□□□□□ -0.31
HCFC1-203ENST00000444191 SOS2Q07890 1332 aaPredicted RBP13.12□□□□□ -0.31
HCFC1-203ENST00000444191 KCNJ18B7U540 433 aa13.12□□□□□ -0.31
HCFC1-203ENST00000444191 ZEB2O60315 1214 aa13.12□□□□□ -0.31
HCFC1-203ENST00000444191 IFNAR1P17181 557 aa13.12□□□□□ -0.31
HCFC1-203ENST00000444191 CXCR5P32302 372 aa13.12□□□□□ -0.31
HCFC1-203ENST00000444191 EPS15P42566 896 aa13.12□□□□□ -0.31
HCFC1-203ENST00000444191 FXR1P51114 621 aaKnown RBP eCLIP13.12□□□□□ -0.314e-7■■■□□ 17.6
HCFC1-203ENST00000444191 KCNJ12Q14500 433 aa13.12□□□□□ -0.31
HCFC1-203ENST00000444191 PTPAQ15257 358 aa13.12□□□□□ -0.31
HCFC1-203ENST00000444191 AMOTL1Q8IY63 956 aa13.12□□□□□ -0.31
HCFC1-203ENST00000444191 IGDCC4Q8TDY8 1250 aa13.12□□□□□ -0.31
HCFC1-203ENST00000444191 BPIFA3Q9BQP9 254 aa13.12□□□□□ -0.31
HCFC1-203ENST00000444191 TUBE1Q9UJT0 475 aa13.12□□□□□ -0.31
HCFC1-203ENST00000444191 MORC3Q14149 939 aa13.11□□□□□ -0.31
HCFC1-203ENST00000444191 SMIM5Q71RC9 77 aa13.11□□□□□ -0.31
HCFC1-203ENST00000444191 DZIP1Q86YF9 867 aaKnown RBP13.11□□□□□ -0.31
HCFC1-203ENST00000444191 PAGE5Q96GU1 130 aa13.11□□□□□ -0.31
HCFC1-203ENST00000444191 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.11□□□□□ -0.31
HCFC1-203ENST00000444191 KAT14Q9H8E8 782 aa13.11□□□□□ -0.31
HCFC1-203ENST00000444191 SALL1Q9NSC2 1324 aa13.11□□□□□ -0.31
HCFC1-203ENST00000444191 TBC1D8O95759 1140 aa13.11□□□□□ -0.31
HCFC1-203ENST00000444191 GOLGA8HP0CJ92 632 aa13.11□□□□□ -0.31
HCFC1-203ENST00000444191 ATP6V1AP38606 617 aa13.11□□□□□ -0.31
HCFC1-203ENST00000444191 CASP7P55210 303 aa13.11□□□□□ -0.31
HCFC1-203ENST00000444191 PIP4K2BP78356 416 aa13.11□□□□□ -0.31
HCFC1-203ENST00000444191 UBE3CQ15386 1083 aa13.11□□□□□ -0.31
HCFC1-203ENST00000444191 LETM2Q2VYF4 491 aa13.11□□□□□ -0.31
HCFC1-203ENST00000444191 RIN2Q8WYP3 895 aaPredicted RBP13.11□□□□□ -0.31
HCFC1-203ENST00000444191 CPVLQ9H3G5 476 aa13.11□□□□□ -0.31
HCFC1-203ENST00000444191 FAM207AQ9NSI2 230 aaPredicted RBP13.11□□□□□ -0.31
HCFC1-203ENST00000444191 BTG4Q9NY30 223 aa13.11□□□□□ -0.31
HCFC1-203ENST00000444191 ADGRG1Q9Y653 693 aa13.11□□□□□ -0.31
HCFC1-203ENST00000444191 PP2D1A8MPX8 630 aa13.11□□□□□ -0.31
HCFC1-203ENST00000444191 CUL4BQ13620 913 aa13.11□□□□□ -0.31
HCFC1-203ENST00000444191 CADPS2Q86UW7 1296 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms