RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 C12orf60Q5U649 245 aa24.11■■□□□ 1.45
LRCH3-208ENST00000443727 APPBP2Q92624 585 aa24.11■■□□□ 1.45
LRCH3-208ENST00000443727 GCC1Q96CN9 775 aa24.11■■□□□ 1.45
LRCH3-208ENST00000443727 C12orf42Q96LP6 360 aa24.11■■□□□ 1.45
LRCH3-208ENST00000443727 CENPFP49454 3210 aa24.11■■□□□ 1.45
LRCH3-208ENST00000443727 MYH7P12883 1935 aa24.1■■□□□ 1.45
LRCH3-208ENST00000443727 USP17L15C9J2P7 530 aa24.1■■□□□ 1.45
LRCH3-208ENST00000443727 USP17L13C9JLJ4 530 aa24.1■■□□□ 1.45
LRCH3-208ENST00000443727 USP17L11C9JVI0 530 aa24.1■■□□□ 1.45
LRCH3-208ENST00000443727 USP17L18D6R9N7 530 aa24.1■■□□□ 1.45
LRCH3-208ENST00000443727 USP17L22D6RA61 530 aa24.1■■□□□ 1.45
LRCH3-208ENST00000443727 USP17L17D6RBQ6 530 aa24.1■■□□□ 1.45
LRCH3-208ENST00000443727 USP17L19D6RCP7 530 aa24.1■■□□□ 1.45
LRCH3-208ENST00000443727 USP17L20D6RJB6 530 aa24.1■■□□□ 1.45
LRCH3-208ENST00000443727 USP17L24Q0WX57 530 aa24.1■■□□□ 1.45
LRCH3-208ENST00000443727 HDAC1Q13547 482 aaPredicted RBP24.1■■□□□ 1.45
LRCH3-208ENST00000443727 AAMPQ13685 434 aa24.1■■□□□ 1.45
LRCH3-208ENST00000443727 TMEM179Q6ZVK1 233 aa24.1■■□□□ 1.45
LRCH3-208ENST00000443727 CCAR1Q8IX12 1150 aaKnown RBP24.1■■□□□ 1.45
LRCH3-208ENST00000443727 GPRC5AQ8NFJ5 357 aa24.1■■□□□ 1.45
LRCH3-208ENST00000443727 GTF3C2Q8WUA4 911 aaPredicted RBP24.1■■□□□ 1.45
LRCH3-208ENST00000443727 STRBPQ96SI9 672 aaKnown RBP24.1■■□□□ 1.45
LRCH3-208ENST00000443727 MORF4L1Q9UBU8 362 aa24.1■■□□□ 1.45
LRCH3-208ENST00000443727 GUCY1A2P33402 732 aa24.09■■□□□ 1.45
LRCH3-208ENST00000443727 PI4K2BQ8TCG2 481 aa24.09■■□□□ 1.45
LRCH3-208ENST00000443727 OSBP2Q969R2 916 aa24.09■■□□□ 1.45
LRCH3-208ENST00000443727 PAGR1Q9BTK6 254 aa24.09■■□□□ 1.45
LRCH3-208ENST00000443727 FSD1Q9BTV5 496 aa24.09■■□□□ 1.45
LRCH3-208ENST00000443727 TNRC18O15417 2968 aaPredicted RBP24.09■■□□□ 1.45
LRCH3-208ENST00000443727 MGAMO43451 1857 aa24.09■■□□□ 1.45
LRCH3-208ENST00000443727 VCAM1P19320 739 aa24.08■■□□□ 1.45
LRCH3-208ENST00000443727 CDK8P49336 464 aa24.08■■□□□ 1.45
LRCH3-208ENST00000443727 MTFR1Q15390 333 aa24.08■■□□□ 1.45
LRCH3-208ENST00000443727 CTR9Q6PD62 1173 aa24.08■■□□□ 1.45
LRCH3-208ENST00000443727 ARPP21Q9UBL0 812 aaPredicted RBP24.08■■□□□ 1.45
LRCH3-208ENST00000443727 PDE4DIPQ5VU43 2346 aa24.07■■□□□ 1.44
LRCH3-208ENST00000443727 APPP05067 770 aa24.07■■□□□ 1.44
LRCH3-208ENST00000443727 CCL5P13501 91 aa24.07■■□□□ 1.44
LRCH3-208ENST00000443727 AKR1B1P15121 316 aa24.07■■□□□ 1.44
LRCH3-208ENST00000443727 ELNP15502 786 aa24.07■■□□□ 1.44
LRCH3-208ENST00000443727 IRF5Q13568 498 aa24.07■■□□□ 1.44
LRCH3-208ENST00000443727 C16orf86Q6ZW13 317 aa24.07■■□□□ 1.44
LRCH3-208ENST00000443727 CCDC17Q96LX7 622 aa24.07■■□□□ 1.44
LRCH3-208ENST00000443727 TXNRD2Q9NNW7 524 aa24.07■■□□□ 1.44
LRCH3-208ENST00000443727 GPAA1O43292 621 aa24.06■■□□□ 1.44
LRCH3-208ENST00000443727 PEX10O60683 326 aa24.06■■□□□ 1.44
LRCH3-208ENST00000443727 GNAT2P19087 354 aa24.06■■□□□ 1.44
LRCH3-208ENST00000443727 PXYLP1Q8TE99 480 aa24.06■■□□□ 1.44
LRCH3-208ENST00000443727 RNF208Q9H0X6 261 aa24.06■■□□□ 1.44
LRCH3-208ENST00000443727 RPAP3Q9H6T3 665 aaPredicted RBP24.06■■□□□ 1.44
LRCH3-208ENST00000443727 ARHGEF10LQ9HCE6 1279 aa24.06■■□□□ 1.44
LRCH3-208ENST00000443727 CWC22Q9HCG8 908 aaKnown RBP24.06■■□□□ 1.44
LRCH3-208ENST00000443727 RBPJLQ9UBG7 517 aa24.06■■□□□ 1.44
LRCH3-208ENST00000443727 GSG1L2A8MUP6 293 aa24.05■■□□□ 1.44
LRCH3-208ENST00000443727 SMIM22K7EJ46 135 aa24.05■■□□□ 1.44
LRCH3-208ENST00000443727 ERVK-9P63128 1117 aa24.05■■□□□ 1.44
LRCH3-208ENST00000443727 ERVK-24P63145 666 aa24.05■■□□□ 1.44
LRCH3-208ENST00000443727 ICA1Q05084 483 aa24.05■■□□□ 1.44
LRCH3-208ENST00000443727 GIMAP6Q6P9H5 292 aa24.05■■□□□ 1.44
LRCH3-208ENST00000443727 CATSPERGQ6ZRH7 1159 aa24.05■■□□□ 1.44
LRCH3-208ENST00000443727 RWDD1Q9H446 243 aaPredicted RBP24.05■■□□□ 1.44
LRCH3-208ENST00000443727 SH2D4AQ9H788 454 aa24.05■■□□□ 1.44
LRCH3-208ENST00000443727 BAZ2AQ9UIF9 1905 aaKnown RBP24.05■■□□□ 1.44
LRCH3-208ENST00000443727 RBBP6Q7Z6E9 1792 aaKnown RBP24.05■■□□□ 1.44
LRCH3-208ENST00000443727 A0A1W2PRG0 241 aa24.04■■□□□ 1.44
LRCH3-208ENST00000443727 MINDY4BA8MYZ0 360 aa24.04■■□□□ 1.44
LRCH3-208ENST00000443727 M0R2C6 588 aa24.04■■□□□ 1.44
LRCH3-208ENST00000443727 INHAP05111 366 aa24.04■■□□□ 1.44
LRCH3-208ENST00000443727 MAPK4P31152 587 aa24.04■■□□□ 1.44
LRCH3-208ENST00000443727 TDO2P48775 406 aa24.04■■□□□ 1.44
LRCH3-208ENST00000443727 NKX2-3Q8TAU0 364 aa24.04■■□□□ 1.44
LRCH3-208ENST00000443727 ATP2B2Q01814 1243 aa24.03■■□□□ 1.44
LRCH3-208ENST00000443727 STK11IPQ8N1F8 1099 aa24.03■■□□□ 1.44
LRCH3-208ENST00000443727 TANGO6Q9C0B7 1094 aa24.03■■□□□ 1.44
LRCH3-208ENST00000443727 RABGAP1Q9Y3P9 1069 aa24.03■■□□□ 1.44
LRCH3-208ENST00000443727 CCNA1P78396 465 aa24.02■■□□□ 1.44
LRCH3-208ENST00000443727 Q3C1V9 767 aa24.02■■□□□ 1.44
LRCH3-208ENST00000443727 SBK1Q52WX2 424 aa24.02■■□□□ 1.44
LRCH3-208ENST00000443727 CLEC10AQ8IUN9 316 aa24.02■■□□□ 1.44
LRCH3-208ENST00000443727 NACAP1Q9BZK3 213 aa24.02■■□□□ 1.44
LRCH3-208ENST00000443727 UNC93B1Q9H1C4 597 aa24.02■■□□□ 1.44
LRCH3-208ENST00000443727 MKNK2Q9HBH9 465 aa24.02■■□□□ 1.44
LRCH3-208ENST00000443727 GJB1P08034 283 aa24.01■■□□□ 1.43
LRCH3-208ENST00000443727 PRPF38BQ5VTL8 546 aaKnown RBP24.01■■□□□ 1.43
LRCH3-208ENST00000443727 EXOC6Q8TAG9 804 aa24.01■■□□□ 1.43
LRCH3-208ENST00000443727 NUDT12Q9BQG2 462 aa24.01■■□□□ 1.43
LRCH3-208ENST00000443727 KANSL2Q9H9L4 492 aa24.01■■□□□ 1.43
LRCH3-208ENST00000443727 GJD2Q9UKL4 321 aa24.01■■□□□ 1.43
LRCH3-208ENST00000443727 PATL2C9JE40 543 aaKnown RBP24■■□□□ 1.43
LRCH3-208ENST00000443727 PDE1AP54750 535 aa24■■□□□ 1.43
LRCH3-208ENST00000443727 WDR78Q5VTH9 848 aa24■■□□□ 1.43
LRCH3-208ENST00000443727 B4GALNT3Q6L9W6 998 aa24■■□□□ 1.43
LRCH3-208ENST00000443727 SOCS4Q8WXH5 440 aa24■■□□□ 1.43
LRCH3-208ENST00000443727 LPAR1Q92633 364 aa24■■□□□ 1.43
LRCH3-208ENST00000443727 SEC62Q99442 399 aaKnown RBP24■■□□□ 1.43
LRCH3-208ENST00000443727 PORCNQ9H237 461 aa24■■□□□ 1.43
LRCH3-208ENST00000443727 STAP2Q9UGK3 403 aa24■■□□□ 1.43
LRCH3-208ENST00000443727 TMX2Q9Y320 296 aa24■■□□□ 1.43
LRCH3-208ENST00000443727 SALL3Q9BXA9 1300 aa24■■□□□ 1.43
LRCH3-208ENST00000443727 CYP2B6P20813 491 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms