RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 ABT1Q9ULW3 272 aaKnown RBP18.58■□□□□ 0.56
USP40-206ENST00000443711 TLL2Q9Y6L7 1015 aa18.58■□□□□ 0.56
USP40-206ENST00000443711 ERICH2A1L162 156 aa18.57■□□□□ 0.56
USP40-206ENST00000443711 IFIT3O14879 490 aaKnown RBP18.57■□□□□ 0.56
USP40-206ENST00000443711 RPS6KB1P23443 525 aa18.57■□□□□ 0.56
USP40-206ENST00000443711 ANTXR2P58335 489 aa18.57■□□□□ 0.56
USP40-206ENST00000443711 EXOSC10Q01780 885 aaKnown RBP18.57■□□□□ 0.56
USP40-206ENST00000443711 CHST3Q7LGC8 479 aa18.57■□□□□ 0.56
USP40-206ENST00000443711 ERO1BQ86YB8 467 aa18.57■□□□□ 0.56
USP40-206ENST00000443711 CEP95Q96GE4 821 aa18.57■□□□□ 0.56
USP40-206ENST00000443711 TMEM87BQ96K49 555 aa18.57■□□□□ 0.56
USP40-206ENST00000443711 TTC14Q96N46 770 aa18.57■□□□□ 0.56
USP40-206ENST00000443711 ZKSCAN3Q9BRR0 538 aa18.57■□□□□ 0.56
USP40-206ENST00000443711 IL17RBQ9NRM6 502 aa18.57■□□□□ 0.56
USP40-206ENST00000443711 MTMR4Q9NYA4 1195 aa18.57■□□□□ 0.56
USP40-206ENST00000443711 NYAP2Q9P242 653 aa18.57■□□□□ 0.56
USP40-206ENST00000443711 SPDYE5A6NIY4 337 aa18.56■□□□□ 0.56
USP40-206ENST00000443711 NMT2O60551 498 aa18.56■□□□□ 0.56
USP40-206ENST00000443711 CPA1P15085 419 aa18.56■□□□□ 0.56
USP40-206ENST00000443711 ICA1Q05084 483 aa18.56■□□□□ 0.56
USP40-206ENST00000443711 PPATQ06203 517 aa18.56■□□□□ 0.56
USP40-206ENST00000443711 DGKHQ86XP1 1220 aa18.56■□□□□ 0.56
USP40-206ENST00000443711 KIF2CQ99661 725 aa18.56■□□□□ 0.56
USP40-206ENST00000443711 WDR18Q9BV38 432 aa18.56■□□□□ 0.56
USP40-206ENST00000443711 ARHGEF10LQ9HCE6 1279 aa18.56■□□□□ 0.56
USP40-206ENST00000443711 CREBZFQ9NS37 354 aa18.56■□□□□ 0.56
USP40-206ENST00000443711 ZHX2Q9Y6X8 837 aa18.56■□□□□ 0.56
USP40-206ENST00000443711 MYH4Q9Y623 1939 aa18.56■□□□□ 0.56
USP40-206ENST00000443711 TNKSO95271 1327 aa18.55■□□□□ 0.56
USP40-206ENST00000443711 TTLL1O95922 423 aa18.55■□□□□ 0.56
USP40-206ENST00000443711 EEF2P13639 858 aaKnown RBP18.55■□□□□ 0.56
USP40-206ENST00000443711 ATP2B2Q01814 1243 aa18.55■□□□□ 0.56
USP40-206ENST00000443711 COL9A3Q14050 684 aaPredicted RBP18.55■□□□□ 0.56
USP40-206ENST00000443711 TMEM67Q5HYA8 995 aa18.55■□□□□ 0.56
USP40-206ENST00000443711 RGMBQ6NW40 437 aa18.55■□□□□ 0.56
USP40-206ENST00000443711 IGDCC4Q8TDY8 1250 aa18.55■□□□□ 0.56
USP40-206ENST00000443711 HHIPL1Q96JK4 782 aa18.55■□□□□ 0.56
USP40-206ENST00000443711 UPF3BQ9BZI7 483 aaKnown RBP18.55■□□□□ 0.56
USP40-206ENST00000443711 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.55■□□□□ 0.56
USP40-206ENST00000443711 CLIP2Q9UDT6 1046 aa18.55■□□□□ 0.56
USP40-206ENST00000443711 PHIPQ8WWQ0 1821 aa18.55■□□□□ 0.56
USP40-206ENST00000443711 NOVP48745 357 aa18.54■□□□□ 0.56
USP40-206ENST00000443711 ZNF157P51786 506 aaPredicted RBP18.54■□□□□ 0.56
USP40-206ENST00000443711 FGD1P98174 961 aa18.54■□□□□ 0.56
USP40-206ENST00000443711 WTAPQ15007 396 aa18.54■□□□□ 0.56
USP40-206ENST00000443711 RABEP1Q15276 862 aa18.54■□□□□ 0.56
USP40-206ENST00000443711 SEC23AQ15436 765 aa18.54■□□□□ 0.56
USP40-206ENST00000443711 CCDC84Q86UT8 332 aaPredicted RBP18.54■□□□□ 0.56
USP40-206ENST00000443711 CLEC10AQ8IUN9 316 aa18.54■□□□□ 0.56
USP40-206ENST00000443711 SIAH1Q8IUQ4 282 aa18.54■□□□□ 0.56
USP40-206ENST00000443711 TMTC2Q8N394 836 aa18.54■□□□□ 0.56
USP40-206ENST00000443711 ENAHQ8N8S7 591 aaPredicted RBP18.54■□□□□ 0.56
USP40-206ENST00000443711 ZNF280CQ8ND82 737 aa18.54■□□□□ 0.56
USP40-206ENST00000443711 IL27Q8NEV9 243 aa18.54■□□□□ 0.56
USP40-206ENST00000443711 ANKS1AQ92625 1134 aa18.54■□□□□ 0.56
USP40-206ENST00000443711 MKL1Q969V6 931 aa18.54■□□□□ 0.56
USP40-206ENST00000443711 OPTNQ96CV9 577 aa18.54■□□□□ 0.56
USP40-206ENST00000443711 OTUD5Q96G74 571 aa18.54■□□□□ 0.56
USP40-206ENST00000443711 SH2D4AQ9H788 454 aa18.54■□□□□ 0.56
USP40-206ENST00000443711 PDRG1Q9NUG6 133 aa18.54■□□□□ 0.56
USP40-206ENST00000443711 STX8Q9UNK0 236 aa18.54■□□□□ 0.56
USP40-206ENST00000443711 AFG3L2Q9Y4W6 797 aa18.54■□□□□ 0.56
USP40-206ENST00000443711 TOP1P11387 765 aaKnown RBP18.53■□□□□ 0.56
USP40-206ENST00000443711 NEK4P51957 841 aa18.53■□□□□ 0.56
USP40-206ENST00000443711 SPP2Q13103 211 aa18.53■□□□□ 0.56
USP40-206ENST00000443711 PPIL2Q13356 520 aa18.53■□□□□ 0.56
USP40-206ENST00000443711 IFIT1BQ5T764 474 aaKnown RBP18.53■□□□□ 0.56
USP40-206ENST00000443711 RCSD1Q6JBY9 416 aa18.53■□□□□ 0.56
USP40-206ENST00000443711 CNKSR2Q8WXI2 1034 aa18.53■□□□□ 0.56
USP40-206ENST00000443711 TCEANC2Q96MN5 208 aa18.53■□□□□ 0.56
USP40-206ENST00000443711 LRRC2Q9BYS8 371 aa18.53■□□□□ 0.56
USP40-206ENST00000443711 SYNPO2Q9UMS6 1093 aa18.53■□□□□ 0.56
USP40-206ENST00000443711 USP17L10C9JJH3 530 aa18.52■□□□□ 0.56
USP40-206ENST00000443711 SH2B2O14492 632 aaPredicted RBP18.52■□□□□ 0.56
USP40-206ENST00000443711 CXCL11O14625 94 aa18.52■□□□□ 0.56
USP40-206ENST00000443711 LIFRP42702 1097 aa18.52■□□□□ 0.56
USP40-206ENST00000443711 Q6ZUG5 572 aa18.52■□□□□ 0.56
USP40-206ENST00000443711 FBXL16Q8N461 479 aa18.52■□□□□ 0.56
USP40-206ENST00000443711 ACER1Q8TDN7 264 aa18.52■□□□□ 0.56
USP40-206ENST00000443711 CCDC102AQ96A19 550 aa18.52■□□□□ 0.56
USP40-206ENST00000443711 WNK4Q96J92 1243 aa18.52■□□□□ 0.56
USP40-206ENST00000443711 FEZ1Q99689 392 aa18.52■□□□□ 0.56
USP40-206ENST00000443711 TMEM47Q9BQJ4 181 aa18.52■□□□□ 0.56
USP40-206ENST00000443711 ALDH8A1Q9H2A2 487 aaPredicted RBP18.52■□□□□ 0.56
USP40-206ENST00000443711 KAT14Q9H8E8 782 aa18.52■□□□□ 0.56
USP40-206ENST00000443711 TMX2Q9Y320 296 aa18.52■□□□□ 0.56
USP40-206ENST00000443711 A0A1W2PRG0 241 aa18.51■□□□□ 0.55
USP40-206ENST00000443711 C19orf81C9J6K1 198 aa18.51■□□□□ 0.55
USP40-206ENST00000443711 ZBTB48P10074 688 aaPredicted RBP18.51■□□□□ 0.55
USP40-206ENST00000443711 SPRYD7Q5W111 196 aa18.51■□□□□ 0.55
USP40-206ENST00000443711 KIAA1683Q9H0B3 1180 aa18.51■□□□□ 0.55
USP40-206ENST00000443711 LY9Q9HBG7 655 aa18.51■□□□□ 0.55
USP40-206ENST00000443711 GPHNQ9NQX3 736 aaPredicted RBP18.51■□□□□ 0.55
USP40-206ENST00000443711 KCNH4Q9UQ05 1017 aa18.51■□□□□ 0.55
USP40-206ENST00000443711 CCDC69A6NI79 296 aa18.5■□□□□ 0.55
USP40-206ENST00000443711 TRIM75PA6NK02 468 aa18.5■□□□□ 0.55
USP40-206ENST00000443711 IRF6O14896 467 aa18.5■□□□□ 0.55
USP40-206ENST00000443711 ECE1P42892 770 aa18.5■□□□□ 0.55
USP40-206ENST00000443711 USP14P54578 494 aa18.5■□□□□ 0.55
USP40-206ENST00000443711 BACE1P56817 501 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms