RNA–Protein interactions for RNA: ENST00000443206.2

TOM1-208, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-208ENST00000443206 PATL2C9JE40 543 aaKnown RBP15.71■□□□□ 0.11
TOM1-208ENST00000443206 M0R2C6 588 aa15.71■□□□□ 0.11
TOM1-208ENST00000443206 CDK8P49336 464 aa15.71■□□□□ 0.11
TOM1-208ENST00000443206 RGS19P49795 217 aa15.71■□□□□ 0.11
TOM1-208ENST00000443206 SOX10P56693 466 aa15.71■□□□□ 0.11
TOM1-208ENST00000443206 IRX6P78412 446 aaPredicted RBP15.71■□□□□ 0.11
TOM1-208ENST00000443206 NUCB1Q02818 461 aa15.71■□□□□ 0.11
TOM1-208ENST00000443206 ZYXQ15942 572 aaKnown RBP15.71■□□□□ 0.11
TOM1-208ENST00000443206 FAM110CQ1W6H9 321 aa15.71■□□□□ 0.11
TOM1-208ENST00000443206 SBK1Q52WX2 424 aa15.71■□□□□ 0.11
TOM1-208ENST00000443206 C16orf86Q6ZW13 317 aa15.71■□□□□ 0.11
TOM1-208ENST00000443206 TRIM47Q96LD4 638 aa15.71■□□□□ 0.11
TOM1-208ENST00000443206 NACAP1Q9BZK3 213 aa15.71■□□□□ 0.11
TOM1-208ENST00000443206 KIAA1683Q9H0B3 1180 aa15.71■□□□□ 0.11
TOM1-208ENST00000443206 EMILIN3Q9NT22 766 aa15.71■□□□□ 0.11
TOM1-208ENST00000443206 SRRDQ9UH36 339 aa15.71■□□□□ 0.11
TOM1-208ENST00000443206 PTCH2Q9Y6C5 1203 aa15.71■□□□□ 0.11
TOM1-208ENST00000443206 HTTP42858 3142 aa15.7■□□□□ 0.1
TOM1-208ENST00000443206 CENPFP49454 3210 aa15.7■□□□□ 0.1
TOM1-208ENST00000443206 MINDY4BA8MYZ0 360 aa15.7■□□□□ 0.1
TOM1-208ENST00000443206 CTGFP29279 349 aa15.7■□□□□ 0.1
TOM1-208ENST00000443206 GUCY1A2P33402 732 aa15.7■□□□□ 0.1
TOM1-208ENST00000443206 TDO2P48775 406 aa15.7■□□□□ 0.1
TOM1-208ENST00000443206 SLC9C1Q4G0N8 1177 aa15.7■□□□□ 0.1
TOM1-208ENST00000443206 ZMYM1Q5SVZ6 1142 aa15.7■□□□□ 0.1
TOM1-208ENST00000443206 ACER1Q8TDN7 264 aa15.7■□□□□ 0.1
TOM1-208ENST00000443206 C12orf42Q96LP6 360 aa15.7■□□□□ 0.1
TOM1-208ENST00000443206 SEC62Q99442 399 aaKnown RBP15.7■□□□□ 0.1
TOM1-208ENST00000443206 TRIM6-TRIM34B2RNG4 842 aa15.69■□□□□ 0.1
TOM1-208ENST00000443206 MLLT1Q03111 559 aaPredicted RBP15.69■□□□□ 0.1
TOM1-208ENST00000443206 TICAM2Q86XR7 235 aa15.69■□□□□ 0.1
TOM1-208ENST00000443206 IFNL3Q8IZI9 196 aa15.69■□□□□ 0.1
TOM1-208ENST00000443206 RAET1EQ8TD07 263 aa15.69■□□□□ 0.1
TOM1-208ENST00000443206 P2RX7Q99572 595 aaKnown RBP15.69■□□□□ 0.1
TOM1-208ENST00000443206 MKNK2Q9HBH9 465 aa15.69■□□□□ 0.1
TOM1-208ENST00000443206 USP17L15C9J2P7 530 aa15.68■□□□□ 0.1
TOM1-208ENST00000443206 USP17L13C9JLJ4 530 aa15.68■□□□□ 0.1
TOM1-208ENST00000443206 USP17L11C9JVI0 530 aa15.68■□□□□ 0.1
TOM1-208ENST00000443206 USP17L18D6R9N7 530 aa15.68■□□□□ 0.1
TOM1-208ENST00000443206 USP17L22D6RA61 530 aa15.68■□□□□ 0.1
TOM1-208ENST00000443206 USP17L17D6RBQ6 530 aa15.68■□□□□ 0.1
TOM1-208ENST00000443206 USP17L19D6RCP7 530 aa15.68■□□□□ 0.1
TOM1-208ENST00000443206 USP17L20D6RJB6 530 aa15.68■□□□□ 0.1
TOM1-208ENST00000443206 SMIM22K7EJ46 135 aa15.68■□□□□ 0.1
TOM1-208ENST00000443206 TNPO2O14787 897 aaKnown RBP15.68■□□□□ 0.1
TOM1-208ENST00000443206 AKR1B1P15121 316 aa15.68■□□□□ 0.1
TOM1-208ENST00000443206 HERVK_113P62684 666 aa15.68■□□□□ 0.1
TOM1-208ENST00000443206 USP17L24Q0WX57 530 aa15.68■□□□□ 0.1
TOM1-208ENST00000443206 GTF3C2Q8WUA4 911 aaPredicted RBP15.68■□□□□ 0.1
TOM1-208ENST00000443206 RILPL2Q969X0 211 aa15.68■□□□□ 0.1
TOM1-208ENST00000443206 COA7Q96BR5 231 aa15.68■□□□□ 0.1
TOM1-208ENST00000443206 ARMC5Q96C12 935 aa15.68■□□□□ 0.1
TOM1-208ENST00000443206 ZNF287Q9HBT7 754 aa15.68■□□□□ 0.1
TOM1-208ENST00000443206 ARHGEF10LQ9HCE6 1279 aa15.68■□□□□ 0.1
TOM1-208ENST00000443206 MYPNQ86TC9 1320 aa15.68■□□□□ 0.1
TOM1-208ENST00000443206 PLEKHM2Q8IWE5 1019 aa15.67■□□□□ 0.1
TOM1-208ENST00000443206 STK11IPQ8N1F8 1099 aa15.67■□□□□ 0.1
TOM1-208ENST00000443206 NAPBQ9H115 298 aa15.67■□□□□ 0.1
TOM1-208ENST00000443206 OSBPL3Q9H4L5 887 aa15.67■□□□□ 0.1
TOM1-208ENST00000443206 SH2D4AQ9H788 454 aa15.67■□□□□ 0.1
TOM1-208ENST00000443206 EPB41L4AQ9HCS5 686 aaPredicted RBP15.67■□□□□ 0.1
TOM1-208ENST00000443206 HELLSQ9NRZ9 838 aa15.67■□□□□ 0.1
TOM1-208ENST00000443206 A0A1W2PRG0 241 aa15.66■□□□□ 0.1
TOM1-208ENST00000443206 VCAM1P19320 739 aa15.66■□□□□ 0.1
TOM1-208ENST00000443206 ICA1Q05084 483 aa15.66■□□□□ 0.1
TOM1-208ENST00000443206 CATSPERGQ6ZRH7 1159 aa15.66■□□□□ 0.1
TOM1-208ENST00000443206 GPRC5AQ8NFJ5 357 aa15.66■□□□□ 0.1
TOM1-208ENST00000443206 TMEM106CQ9BVX2 250 aa15.66■□□□□ 0.1
TOM1-208ENST00000443206 KANSL2Q9H9L4 492 aa15.66■□□□□ 0.1
TOM1-208ENST00000443206 MORF4L1Q9UBU8 362 aa15.66■□□□□ 0.1
TOM1-208ENST00000443206 SLC3A2P08195 630 aaKnown RBP15.65■□□□□ 0.1
TOM1-208ENST00000443206 GRK4P32298 578 aa15.65■□□□□ 0.1
TOM1-208ENST00000443206 ATP2B2Q01814 1243 aa15.65■□□□□ 0.1
TOM1-208ENST00000443206 PRKCZQ05513 592 aa15.65■□□□□ 0.1
TOM1-208ENST00000443206 CCAR1Q8IX12 1150 aaKnown RBP15.65■□□□□ 0.1
TOM1-208ENST00000443206 ZNF444Q8N0Y2 327 aaPredicted RBP15.65■□□□□ 0.1
TOM1-208ENST00000443206 SH3TC2Q8TF17 1288 aa15.65■□□□□ 0.1
TOM1-208ENST00000443206 ZNF333Q96JL9 665 aa15.65■□□□□ 0.1
TOM1-208ENST00000443206 RPAP3Q9H6T3 665 aaPredicted RBP15.65■□□□□ 0.1
TOM1-208ENST00000443206 BIN2Q9UBW5 565 aaPredicted RBP15.65■□□□□ 0.1
TOM1-208ENST00000443206 GABRQQ9UN88 632 aa15.65■□□□□ 0.1
TOM1-208ENST00000443206 FLT3LGP49771 235 aa15.64■□□□□ 0.09
TOM1-208ENST00000443206 PDE4BQ07343 736 aa15.64■□□□□ 0.09
TOM1-208ENST00000443206 MCMDC2Q4G0Z9 681 aa15.64■□□□□ 0.09
TOM1-208ENST00000443206 CCDC129Q6ZRS4 1044 aa15.64■□□□□ 0.09
TOM1-208ENST00000443206 LPAR1Q92633 364 aa15.64■□□□□ 0.09
TOM1-208ENST00000443206 PAGR1Q9BTK6 254 aa15.64■□□□□ 0.09
TOM1-208ENST00000443206 RBPJLQ9UBG7 517 aa15.64■□□□□ 0.09
TOM1-208ENST00000443206 TMX2Q9Y320 296 aa15.64■□□□□ 0.09
TOM1-208ENST00000443206 RABGAP1Q9Y3P9 1069 aa15.64■□□□□ 0.09
TOM1-208ENST00000443206 ROBO3Q96MS0 1386 aa15.63■□□□□ 0.09
TOM1-208ENST00000443206 EEF2P13639 858 aaKnown RBP15.63■□□□□ 0.09
TOM1-208ENST00000443206 RASA1P20936 1047 aa15.63■□□□□ 0.09
TOM1-208ENST00000443206 ERVK-9P63128 1117 aa15.63■□□□□ 0.09
TOM1-208ENST00000443206 ERVK-24P63145 666 aa15.63■□□□□ 0.09
TOM1-208ENST00000443206 COG2Q14746 738 aa15.63■□□□□ 0.09
TOM1-208ENST00000443206 CLEC10AQ8IUN9 316 aa15.63■□□□□ 0.09
TOM1-208ENST00000443206 SIAH1Q8IUQ4 282 aa15.63■□□□□ 0.09
TOM1-208ENST00000443206 SLAIN1Q8ND83 568 aa15.63■□□□□ 0.09
TOM1-208ENST00000443206 TANGO6Q9C0B7 1094 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms