RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 TCEANC2Q96MN5 208 aa15.98■□□□□ 0.15
TM9SF4-204ENST00000442842 TBC1D32Q96NH3 1257 aa15.98■□□□□ 0.15
TM9SF4-204ENST00000442842 FEZ1Q99689 392 aa15.98■□□□□ 0.15
TM9SF4-204ENST00000442842 LRRC2Q9BYS8 371 aa15.98■□□□□ 0.15
TM9SF4-204ENST00000442842 UPF3BQ9BZI7 483 aaKnown RBP15.98■□□□□ 0.15
TM9SF4-204ENST00000442842 GINM1Q9NU53 330 aa15.98■□□□□ 0.15
TM9SF4-204ENST00000442842 ZSWIM5Q9P217 1185 aa15.98■□□□□ 0.15
TM9SF4-204ENST00000442842 STX8Q9UNK0 236 aa15.98■□□□□ 0.15
TM9SF4-204ENST00000442842 ZHX2Q9Y6X8 837 aa15.98■□□□□ 0.15
TM9SF4-204ENST00000442842 ATAD5Q96QE3 1844 aa15.98■□□□□ 0.15
TM9SF4-204ENST00000442842 IGKV6D-41A0A0C4DH26 115 aa15.97■□□□□ 0.15
TM9SF4-204ENST00000442842 SPDYE5A6NIY4 337 aa15.97■□□□□ 0.15
TM9SF4-204ENST00000442842 RBM25P49756 843 aaKnown RBP15.97■□□□□ 0.15
TM9SF4-204ENST00000442842 ANTXR2P58335 489 aa15.97■□□□□ 0.15
TM9SF4-204ENST00000442842 RGMBQ6NW40 437 aa15.97■□□□□ 0.15
TM9SF4-204ENST00000442842 ERO1BQ86YB8 467 aa15.97■□□□□ 0.15
TM9SF4-204ENST00000442842 RASAL3Q86YV0 1011 aa15.97■□□□□ 0.15
TM9SF4-204ENST00000442842 WNK4Q96J92 1243 aa15.97■□□□□ 0.15
TM9SF4-204ENST00000442842 ZSCAN10Q96SZ4 725 aaPredicted RBP15.97■□□□□ 0.15
TM9SF4-204ENST00000442842 AS3MTQ9HBK9 375 aa15.97■□□□□ 0.15
TM9SF4-204ENST00000442842 ERICH2A1L162 156 aa15.96■□□□□ 0.15
TM9SF4-204ENST00000442842 UNCXA6NJT0 531 aa15.96■□□□□ 0.15
TM9SF4-204ENST00000442842 IFIT3O14879 490 aaKnown RBP15.96■□□□□ 0.15
TM9SF4-204ENST00000442842 RAD21O60216 631 aa15.96■□□□□ 0.15
TM9SF4-204ENST00000442842 HMGB1P09429 215 aaKnown RBP15.96■□□□□ 0.15
TM9SF4-204ENST00000442842 EEF2P13639 858 aaKnown RBP15.96■□□□□ 0.15
TM9SF4-204ENST00000442842 RPS6KB1P23443 525 aa15.96■□□□□ 0.15
TM9SF4-204ENST00000442842 ECE1P42892 770 aa15.96■□□□□ 0.15
TM9SF4-204ENST00000442842 NT5C2P49902 561 aa15.96■□□□□ 0.15
TM9SF4-204ENST00000442842 FGD1P98174 961 aa15.96■□□□□ 0.15
TM9SF4-204ENST00000442842 PPATQ06203 517 aa15.96■□□□□ 0.15
TM9SF4-204ENST00000442842 SART3Q15020 963 aaKnown RBP15.96■□□□□ 0.15
TM9SF4-204ENST00000442842 TMEM67Q5HYA8 995 aa15.96■□□□□ 0.15
TM9SF4-204ENST00000442842 LRRC47Q8N1G4 583 aaKnown RBP15.96■□□□□ 0.15
TM9SF4-204ENST00000442842 ACER1Q8TDN7 264 aa15.96■□□□□ 0.15
TM9SF4-204ENST00000442842 KANSL2Q9H9L4 492 aa15.96■□□□□ 0.15
TM9SF4-204ENST00000442842 ARHGEF10LQ9HCE6 1279 aa15.96■□□□□ 0.15
TM9SF4-204ENST00000442842 IL17RBQ9NRM6 502 aa15.96■□□□□ 0.15
TM9SF4-204ENST00000442842 MTMR4Q9NYA4 1195 aa15.96■□□□□ 0.15
TM9SF4-204ENST00000442842 CLIP2Q9UDT6 1046 aa15.96■□□□□ 0.15
TM9SF4-204ENST00000442842 MTMR7Q9Y216 660 aa15.96■□□□□ 0.15
TM9SF4-204ENST00000442842 CYP46A1Q9Y6A2 500 aa15.96■□□□□ 0.15
TM9SF4-204ENST00000442842 GJA5P36382 358 aa15.95■□□□□ 0.14
TM9SF4-204ENST00000442842 PPIL2Q13356 520 aa15.95■□□□□ 0.14
TM9SF4-204ENST00000442842 DGKZQ13574 1117 aa15.95■□□□□ 0.14
TM9SF4-204ENST00000442842 MTMR2Q13614 643 aa15.95■□□□□ 0.14
TM9SF4-204ENST00000442842 CYP4F22Q6NT55 531 aa15.95■□□□□ 0.14
TM9SF4-204ENST00000442842 DHX32Q7L7V1 743 aaKnown RBP15.95■□□□□ 0.14
TM9SF4-204ENST00000442842 ZNF280CQ8ND82 737 aa15.95■□□□□ 0.14
TM9SF4-204ENST00000442842 CHMP4CQ96CF2 233 aa15.95■□□□□ 0.14
TM9SF4-204ENST00000442842 GREB1LQ9C091 1923 aaPredicted RBP15.94■□□□□ 0.14
TM9SF4-204ENST00000442842 SH2B2O14492 632 aaPredicted RBP15.94■□□□□ 0.14
TM9SF4-204ENST00000442842 TTLL1O95922 423 aa15.94■□□□□ 0.14
TM9SF4-204ENST00000442842 SLC10A3P09131 477 aa15.94■□□□□ 0.14
TM9SF4-204ENST00000442842 SPP2Q13103 211 aa15.94■□□□□ 0.14
TM9SF4-204ENST00000442842 WTAPQ15007 396 aa15.94■□□□□ 0.14
TM9SF4-204ENST00000442842 PPP4R3BQ5MIZ7 849 aa15.94■□□□□ 0.14
TM9SF4-204ENST00000442842 IFIT1BQ5T764 474 aaKnown RBP15.94■□□□□ 0.14
TM9SF4-204ENST00000442842 RUFY3Q7L099 469 aa15.94■□□□□ 0.14
TM9SF4-204ENST00000442842 ENAHQ8N8S7 591 aaPredicted RBP15.94■□□□□ 0.14
TM9SF4-204ENST00000442842 SH2D4AQ9H788 454 aa15.94■□□□□ 0.14
TM9SF4-204ENST00000442842 ZSWIM6Q9HCJ5 1215 aa15.94■□□□□ 0.14
TM9SF4-204ENST00000442842 GPHNQ9NQX3 736 aaPredicted RBP15.94■□□□□ 0.14
TM9SF4-204ENST00000442842 TCP11L1Q9NUJ3 509 aa15.94■□□□□ 0.14
TM9SF4-204ENST00000442842 A0A1W2PRG0 241 aa15.93■□□□□ 0.14
TM9SF4-204ENST00000442842 RASSF10A6NK89 507 aa15.93■□□□□ 0.14
TM9SF4-204ENST00000442842 IRF6O14896 467 aa15.93■□□□□ 0.14
TM9SF4-204ENST00000442842 CCDC178Q5BJE1 867 aa15.93■□□□□ 0.14
TM9SF4-204ENST00000442842 SPRYD7Q5W111 196 aa15.93■□□□□ 0.14
TM9SF4-204ENST00000442842 NFXL1Q6ZNB6 911 aa15.93■□□□□ 0.14
TM9SF4-204ENST00000442842 Q6ZUG5 572 aa15.93■□□□□ 0.14
TM9SF4-204ENST00000442842 WDR18Q9BV38 432 aa15.93■□□□□ 0.14
TM9SF4-204ENST00000442842 TBC1D2Q9BYX2 928 aa15.93■□□□□ 0.14
TM9SF4-204ENST00000442842 TM6SF1Q9BZW5 370 aa15.93■□□□□ 0.14
TM9SF4-204ENST00000442842 KAT14Q9H8E8 782 aa15.93■□□□□ 0.14
TM9SF4-204ENST00000442842 ISY1Q9ULR0 285 aaKnown RBP15.93■□□□□ 0.14
TM9SF4-204ENST00000442842 AFG3L2Q9Y4W6 797 aa15.93■□□□□ 0.14
TM9SF4-204ENST00000442842 USP17L10C9JJH3 530 aa15.92■□□□□ 0.14
TM9SF4-204ENST00000442842 HSPA6P17066 643 aa15.92■□□□□ 0.14
TM9SF4-204ENST00000442842 HMGCS2P54868 508 aa15.92■□□□□ 0.14
TM9SF4-204ENST00000442842 DEFB115Q30KQ5 88 aa15.92■□□□□ 0.14
TM9SF4-204ENST00000442842 RCSD1Q6JBY9 416 aa15.92■□□□□ 0.14
TM9SF4-204ENST00000442842 SIAH1Q8IUQ4 282 aa15.92■□□□□ 0.14
TM9SF4-204ENST00000442842 HHIPL1Q96JK4 782 aa15.92■□□□□ 0.14
TM9SF4-204ENST00000442842 TMEM87BQ96K49 555 aa15.92■□□□□ 0.14
TM9SF4-204ENST00000442842 TMEM47Q9BQJ4 181 aa15.92■□□□□ 0.14
TM9SF4-204ENST00000442842 LY9Q9HBG7 655 aa15.92■□□□□ 0.14
TM9SF4-204ENST00000442842 SENP2Q9HC62 589 aa15.92■□□□□ 0.14
TM9SF4-204ENST00000442842 PDRG1Q9NUG6 133 aa15.92■□□□□ 0.14
TM9SF4-204ENST00000442842 NYAP2Q9P242 653 aa15.92■□□□□ 0.14
TM9SF4-204ENST00000442842 NAP1L2Q9ULW6 460 aaPredicted RBP15.92■□□□□ 0.14
TM9SF4-204ENST00000442842 WDR19Q8NEZ3 1342 aa15.92■□□□□ 0.14
TM9SF4-204ENST00000442842 CCDC69A6NI79 296 aa15.91■□□□□ 0.14
TM9SF4-204ENST00000442842 ZBTB48P10074 688 aaPredicted RBP15.91■□□□□ 0.14
TM9SF4-204ENST00000442842 TOP1P11387 765 aaKnown RBP15.91■□□□□ 0.14
TM9SF4-204ENST00000442842 NEK4P51957 841 aa15.91■□□□□ 0.14
TM9SF4-204ENST00000442842 EXOSC10Q01780 885 aaKnown RBP15.91■□□□□ 0.14
TM9SF4-204ENST00000442842 SNAPC2Q13487 334 aa15.91■□□□□ 0.14
TM9SF4-204ENST00000442842 SEC23AQ15436 765 aa15.91■□□□□ 0.14
TM9SF4-204ENST00000442842 GADL1Q6ZQY3 521 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms