RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 ZNF609O15014 1411 aa8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 MARCH6O60337 910 aa8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 FKTNO75072 461 aa8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 UBE2HP62256 183 aa8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 SPICE1Q8N0Z3 855 aa8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 NSUN4Q96CB9 384 aaKnown RBP8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 VAT1LQ9HCJ6 419 aa8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 HERC5Q9UII4 1024 aaKnown RBP8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 TLL2Q9Y6L7 1015 aa8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 PITPNM2Q9BZ72 1349 aa8.57□□□□□ -1.04
CDC42BPA-208ENST00000442054 NCAPG2Q86XI2 1143 aa8.57□□□□□ -1.04
CDC42BPA-208ENST00000442054 ERO1AQ96HE7 468 aa8.57□□□□□ -1.04
CDC42BPA-208ENST00000442054 NAP1L5Q96NT1 182 aaPredicted RBP8.57□□□□□ -1.04
CDC42BPA-208ENST00000442054 MYO5AQ9Y4I1 1855 aaKnown RBP8.57□□□□□ -1.04
CDC42BPA-208ENST00000442054 USP17L10C9JJH3 530 aa8.57□□□□□ -1.04
CDC42BPA-208ENST00000442054 ADD1P35611 737 aaKnown RBP8.57□□□□□ -1.04
CDC42BPA-208ENST00000442054 CCDC183Q5T5S1 534 aa8.57□□□□□ -1.04
CDC42BPA-208ENST00000442054 CPA4Q9UI42 421 aa8.57□□□□□ -1.04
CDC42BPA-208ENST00000442054 DOCK2Q92608 1830 aa8.57□□□□□ -1.04
CDC42BPA-208ENST00000442054 A0A0D9SFI3 127 aa8.57□□□□□ -1.04
CDC42BPA-208ENST00000442054 FGFR2P21802 821 aa8.57□□□□□ -1.04
CDC42BPA-208ENST00000442054 CPLX2Q6PUV4 134 aaKnown RBP8.57□□□□□ -1.04
CDC42BPA-208ENST00000442054 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.57□□□□□ -1.04
CDC42BPA-208ENST00000442054 ZNF710Q8N1W2 664 aa8.57□□□□□ -1.04
CDC42BPA-208ENST00000442054 CCDC17Q96LX7 622 aa8.57□□□□□ -1.04
CDC42BPA-208ENST00000442054 FAM227BQ96M60 508 aa8.57□□□□□ -1.04
CDC42BPA-208ENST00000442054 OSBPL5Q9H0X9 879 aaPredicted RBP8.57□□□□□ -1.04
CDC42BPA-208ENST00000442054 ATP8A2Q9NTI2 1148 aa8.57□□□□□ -1.04
CDC42BPA-208ENST00000442054 CLIP2Q9UDT6 1046 aa8.57□□□□□ -1.04
CDC42BPA-208ENST00000442054 ANKRD36CQ5JPF3 1778 aa8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 SLC27A2O14975 620 aa8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 ITGBL1O95965 494 aaPredicted RBP8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 MCMDC2Q4G0Z9 681 aa8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 TRIM44Q96DX7 344 aaPredicted RBP8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 U3KPZ7 1027 aaPredicted RBP8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 KDM4AO75164 1064 aa8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 UBXN2AP68543 259 aa8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 SP3Q02447 781 aa8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 VGLL4Q14135 290 aa8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 CREB3L3Q68CJ9 461 aa8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 ZNF589Q86UQ0 364 aaPredicted RBP8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 AGXT2Q9BYV1 514 aa8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 GOPCQ9HD26 462 aa8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 CCDC39Q9UFE4 941 aa8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 RIC1Q4ADV7 1423 aa8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 NEDD4P46934 1319 aa8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 SALL1Q9NSC2 1324 aa8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 ZBED4O75132 1171 aa8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 GRIK5Q16478 980 aa8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 FOXD4L5Q5VV16 416 aaPredicted RBP8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 APOBEC3HQ6NTF7 200 aaKnown RBP8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 SCYL3Q8IZE3 742 aa8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 FAM184AQ8NB25 1140 aa8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 ZNF280CQ8ND82 737 aa8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 FOXD4L4Q8WXT5 416 aaPredicted RBP8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 ESR2Q92731 530 aa8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 KAT14Q9H8E8 782 aa8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 ARPP21Q9UBL0 812 aaPredicted RBP8.56□□□□□ -1.04
CDC42BPA-208ENST00000442054 CPLX1O14810 134 aa8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 ARID4AP29374 1257 aaPredicted RBP8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 SLC1A4P43007 532 aa8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 GNL2Q13823 731 aaKnown RBP8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 SLC9C1Q4G0N8 1177 aa8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 WNK4Q96J92 1243 aa8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 HAUS7Q99871 368 aa8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 LARP6Q9BRS8 491 aaKnown RBP8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 PDCL3Q9H2J4 239 aa8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 WNK3Q9BYP7 1800 aa8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 LY75O60449 1722 aa8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 GPR75-ASB3A0A0A6YYF3 556 aa8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 CTNND1O60716 968 aaKnown RBP8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 CASTP20810 708 aaKnown RBP8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 GJB2P29033 226 aa8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 NMIQ13287 307 aaPredicted RBP8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 SPRYD7Q5W111 196 aa8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 KIFC2Q96AC6 838 aa8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 MPHOSPH6Q99547 160 aaKnown RBP8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 HOMER2Q9NSB8 354 aa8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 UBR3Q6ZT12 1888 aa8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 CASZ1Q86V15 1759 aa8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 RREB1Q92766 1687 aa8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 CCDC69A6NI79 296 aa8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 POTECB2RU33 542 aa8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 PRKAB2O43741 272 aa8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 UBE3CQ15386 1083 aa8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 LCORLQ8N3X6 602 aa8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 SH2B1Q9NRF2 756 aaPredicted RBP8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 SWAP70Q9UH65 585 aa8.55□□□□□ -1.04
CDC42BPA-208ENST00000442054 A0A1B0GUL6 1792 aa8.54□□□□□ -1.04
CDC42BPA-208ENST00000442054 IFIT3O14879 490 aaKnown RBP8.54□□□□□ -1.04
CDC42BPA-208ENST00000442054 IRF6O14896 467 aa8.54□□□□□ -1.04
CDC42BPA-208ENST00000442054 TFAP4Q01664 338 aa8.54□□□□□ -1.04
CDC42BPA-208ENST00000442054 DNM1Q05193 864 aaKnown RBP8.54□□□□□ -1.04
CDC42BPA-208ENST00000442054 MTMR2Q13614 643 aa8.54□□□□□ -1.04
CDC42BPA-208ENST00000442054 FKBP1CQ5VVH2 108 aa8.54□□□□□ -1.04
CDC42BPA-208ENST00000442054 DYNLL2Q96FJ2 89 aa8.54□□□□□ -1.04
CDC42BPA-208ENST00000442054 RBM8AQ9Y5S9 174 aaKnown RBP8.54□□□□□ -1.04
CDC42BPA-208ENST00000442054 FOXP2O15409 715 aa8.54□□□□□ -1.04
CDC42BPA-208ENST00000442054 FCGRTP55899 365 aa8.54□□□□□ -1.04
CDC42BPA-208ENST00000442054 KCTD2Q14681 263 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms