RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 PNMA1Q8ND90 353 aa15.2■□□□□ 0.02
CPSF4-206ENST00000441580 DYNLL2Q96FJ2 89 aa15.2■□□□□ 0.02
CPSF4-206ENST00000441580 LZTS2Q9BRK4 669 aa15.2■□□□□ 0.02
CPSF4-206ENST00000441580 GJB4Q9NTQ9 266 aa15.2■□□□□ 0.02
CPSF4-206ENST00000441580 SWAP70Q9UH65 585 aa15.2■□□□□ 0.02
CPSF4-206ENST00000441580 SAP30BPQ9UHR5 308 aaKnown RBP15.2■□□□□ 0.02
CPSF4-206ENST00000441580 PCDHA7Q9UN72 937 aa15.2■□□□□ 0.02
CPSF4-206ENST00000441580 CEP131Q9UPN4 1083 aa15.2■□□□□ 0.02
CPSF4-206ENST00000441580 CLIC4Q9Y696 253 aa15.2■□□□□ 0.02
CPSF4-206ENST00000441580 COL2A1P02458 1487 aaPredicted RBP15.2■□□□□ 0.02
CPSF4-206ENST00000441580 EP400Q96L91 3159 aa15.2■□□□□ 0.02
CPSF4-206ENST00000441580 GREB1LQ9C091 1923 aaPredicted RBP15.19■□□□□ 0.02
CPSF4-206ENST00000441580 ECE2O60344 883 aa15.19■□□□□ 0.02
CPSF4-206ENST00000441580 BMP15O95972 392 aa15.19■□□□□ 0.02
CPSF4-206ENST00000441580 GUCY1A2P33402 732 aa15.19■□□□□ 0.02
CPSF4-206ENST00000441580 KRT2P35908 639 aa15.19■□□□□ 0.02
CPSF4-206ENST00000441580 CDK8P49336 464 aa15.19■□□□□ 0.02
CPSF4-206ENST00000441580 EVX2Q03828 476 aa15.19■□□□□ 0.02
CPSF4-206ENST00000441580 TYRO3Q06418 890 aa15.19■□□□□ 0.02
CPSF4-206ENST00000441580 DOK7Q18PE1 504 aa15.19■□□□□ 0.02
CPSF4-206ENST00000441580 PPP4R3BQ5MIZ7 849 aa15.19■□□□□ 0.02
CPSF4-206ENST00000441580 NEDD1Q8NHV4 660 aa15.19■□□□□ 0.02
CPSF4-206ENST00000441580 PDLIM2Q96JY6 352 aa15.19■□□□□ 0.02
CPSF4-206ENST00000441580 MRIQ9BWK5 157 aa15.19■□□□□ 0.02
CPSF4-206ENST00000441580 SCN9AQ15858 1988 aa15.18■□□□□ 0.02
CPSF4-206ENST00000441580 NMT2O60551 498 aa15.18■□□□□ 0.02
CPSF4-206ENST00000441580 HLA-DOAP06340 250 aa15.18■□□□□ 0.02
CPSF4-206ENST00000441580 PLCD1P51178 756 aa15.18■□□□□ 0.02
CPSF4-206ENST00000441580 KIAA2012Q0VF49 1180 aa15.18■□□□□ 0.02
CPSF4-206ENST00000441580 SASS6Q6UVJ0 657 aa15.18■□□□□ 0.02
CPSF4-206ENST00000441580 OLFM4Q6UX06 510 aa15.18■□□□□ 0.02
CPSF4-206ENST00000441580 RNF214Q8ND24 703 aa15.18■□□□□ 0.02
CPSF4-206ENST00000441580 FAM200AQ8TCP9 573 aa15.18■□□□□ 0.02
CPSF4-206ENST00000441580 PHF20Q9BVI0 1012 aa15.18■□□□□ 0.02
CPSF4-206ENST00000441580 GOLPH3LQ9H4A5 285 aa15.18■□□□□ 0.02
CPSF4-206ENST00000441580 NOL7Q9UMY1 257 aaKnown RBP15.18■□□□□ 0.02
CPSF4-206ENST00000441580 CUTAO60888 179 aa15.17■□□□□ 0.02
CPSF4-206ENST00000441580 SCG2P13521 617 aa15.17■□□□□ 0.02
CPSF4-206ENST00000441580 PTPAQ15257 358 aa15.17■□□□□ 0.02
CPSF4-206ENST00000441580 PKN1Q16512 942 aa15.17■□□□□ 0.02
CPSF4-206ENST00000441580 PFKFB3Q16875 520 aaPredicted RBP15.17■□□□□ 0.02
CPSF4-206ENST00000441580 SLC4A8Q2Y0W8 1093 aa15.17■□□□□ 0.02
CPSF4-206ENST00000441580 CCDC93Q567U6 631 aa15.17■□□□□ 0.02
CPSF4-206ENST00000441580 SLC44A5Q8NCS7 719 aa15.17■□□□□ 0.02
CPSF4-206ENST00000441580 ENGASEQ8NFI3 743 aa15.17■□□□□ 0.02
CPSF4-206ENST00000441580 CCDC148Q8NFR7 591 aa15.17■□□□□ 0.02
CPSF4-206ENST00000441580 ZDHHC15Q96MV8 337 aa15.17■□□□□ 0.02
CPSF4-206ENST00000441580 OSBPL5Q9H0X9 879 aaPredicted RBP15.17■□□□□ 0.02
CPSF4-206ENST00000441580 EHD4Q9H223 541 aa15.17■□□□□ 0.02
CPSF4-206ENST00000441580 DBNDD1Q9H9R9 158 aa15.17■□□□□ 0.02
CPSF4-206ENST00000441580 SH3GLB2Q9NR46 395 aa15.17■□□□□ 0.02
CPSF4-206ENST00000441580 IL17RBQ9NRM6 502 aa15.17■□□□□ 0.02
CPSF4-206ENST00000441580 USP17L3A6NCW0 530 aa15.16■□□□□ 0.02
CPSF4-206ENST00000441580 USP17L4A6NCW7 530 aa15.16■□□□□ 0.02
CPSF4-206ENST00000441580 F8W031 263 aaPredicted RBP15.16■□□□□ 0.02
CPSF4-206ENST00000441580 NPM3O75607 178 aaKnown RBP15.16■□□□□ 0.02
CPSF4-206ENST00000441580 WDHD1O75717 1129 aaPredicted RBP15.16■□□□□ 0.02
CPSF4-206ENST00000441580 TOP1P11387 765 aaKnown RBP15.16■□□□□ 0.02
CPSF4-206ENST00000441580 CMA1P23946 247 aa15.16■□□□□ 0.02
CPSF4-206ENST00000441580 CALML3P27482 149 aa15.16■□□□□ 0.02
CPSF4-206ENST00000441580 CHRNA5P30532 468 aa15.16■□□□□ 0.02
CPSF4-206ENST00000441580 CRKP46108 304 aa15.16■□□□□ 0.02
CPSF4-206ENST00000441580 STX1AQ16623 288 aa15.16■□□□□ 0.02
CPSF4-206ENST00000441580 HS1BP3Q53T59 392 aa15.16■□□□□ 0.02
CPSF4-206ENST00000441580 DACT2Q5SW24 774 aa15.16■□□□□ 0.02
CPSF4-206ENST00000441580 SOGA3Q5TF21 947 aa15.16■□□□□ 0.02
CPSF4-206ENST00000441580 USP17L1Q7RTZ2 530 aa15.16■□□□□ 0.02
CPSF4-206ENST00000441580 FMR1NBQ8N0W7 255 aaPredicted RBP15.16■□□□□ 0.02
CPSF4-206ENST00000441580 C7orf43Q8WVR3 580 aa15.16■□□□□ 0.02
CPSF4-206ENST00000441580 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.16■□□□□ 0.02
CPSF4-206ENST00000441580 KCNJ14Q9UNX9 436 aa15.16■□□□□ 0.02
CPSF4-206ENST00000441580 FAM237AA0A1B0GTK4 181 aa15.15■□□□□ 0.02
CPSF4-206ENST00000441580 BTBD18B2RXH4 712 aa15.15■□□□□ 0.02
CPSF4-206ENST00000441580 UBE2Q2LH0YL09 131 aa15.15■□□□□ 0.02
CPSF4-206ENST00000441580 NOVP48745 357 aa15.15■□□□□ 0.02
CPSF4-206ENST00000441580 GABPAQ06546 454 aa15.15■□□□□ 0.02
CPSF4-206ENST00000441580 PICALMQ13492 652 aa15.15■□□□□ 0.02
CPSF4-206ENST00000441580 SNW1Q13573 536 aaKnown RBP15.15■□□□□ 0.02
CPSF4-206ENST00000441580 CAMK4Q16566 473 aa15.15■□□□□ 0.02
CPSF4-206ENST00000441580 AXDND1Q5T1B0 1012 aaPredicted RBP15.15■□□□□ 0.02
CPSF4-206ENST00000441580 RTKN2Q8IZC4 609 aa15.15■□□□□ 0.02
CPSF4-206ENST00000441580 CMTR1Q8N1G2 835 aaKnown RBP15.15■□□□□ 0.02
CPSF4-206ENST00000441580 FAM43AQ8N2R8 423 aa15.15■□□□□ 0.02
CPSF4-206ENST00000441580 CCDC82Q8N4S0 544 aa15.15■□□□□ 0.02
CPSF4-206ENST00000441580 SRBD1Q8N5C6 995 aaKnown RBP15.15■□□□□ 0.02
CPSF4-206ENST00000441580 KRI1Q8N9T8 703 aaKnown RBP15.15■□□□□ 0.02
CPSF4-206ENST00000441580 TIGD1Q96MW7 591 aa15.15■□□□□ 0.02
CPSF4-206ENST00000441580 SPZ1Q9BXG8 430 aa15.15■□□□□ 0.02
CPSF4-206ENST00000441580 USP40Q9NVE5 1235 aa15.15■□□□□ 0.02
CPSF4-206ENST00000441580 VPS54Q9P1Q0 977 aa15.15■□□□□ 0.02
CPSF4-206ENST00000441580 SERPINA10Q9UK55 444 aa15.15■□□□□ 0.02
CPSF4-206ENST00000441580 STX8Q9UNK0 236 aa15.15■□□□□ 0.02
CPSF4-206ENST00000441580 MRVI1Q9Y6F6 885 aa15.15■□□□□ 0.02
CPSF4-206ENST00000441580 V9GY48 417 aaPredicted RBP15.15■□□□□ 0.02
CPSF4-206ENST00000441580 SIPA1L1O43166 1804 aa15.15■□□□□ 0.02
CPSF4-206ENST00000441580 PFKFB1P16118 471 aa15.14■□□□□ 0.01
CPSF4-206ENST00000441580 TRAPPC10P48553 1259 aa15.14■□□□□ 0.01
CPSF4-206ENST00000441580 GALNT17Q6IS24 598 aa15.14■□□□□ 0.01
CPSF4-206ENST00000441580 CDC42EP5Q6NZY7 148 aa15.14■□□□□ 0.01
CPSF4-206ENST00000441580 CKAP2LQ8IYA6 745 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms