RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 CLEC11AQ9Y240 323 aa16.68■□□□□ 0.26
TSC2-206ENST00000439117 RIPOR2Q9Y4F9 1068 aa16.68■□□□□ 0.26
TSC2-206ENST00000439117 RILPL1Q5EBL4 403 aa16.68■□□□□ 0.26
TSC2-206ENST00000439117 ANO1Q5XXA6 986 aa16.68■□□□□ 0.26
TSC2-206ENST00000439117 LOC102724428A0A0B4J2F2 783 aa16.68■□□□□ 0.26
TSC2-206ENST00000439117 ATP5JP18859 108 aa16.68■□□□□ 0.26
TSC2-206ENST00000439117 KRT9P35527 623 aa16.68■□□□□ 0.26
TSC2-206ENST00000439117 SIK1P57059 783 aa16.68■□□□□ 0.26
TSC2-206ENST00000439117 SPATA5Q8NB90 893 aa16.68■□□□□ 0.26
TSC2-206ENST00000439117 KCNH3Q9ULD8 1083 aa16.68■□□□□ 0.26
TSC2-206ENST00000439117 KRT2P35908 639 aa16.67■□□□□ 0.26
TSC2-206ENST00000439117 CFAP221Q4G0U5 840 aa16.67■□□□□ 0.26
TSC2-206ENST00000439117 XPO4Q9C0E2 1151 aaKnown RBP16.67■□□□□ 0.26
TSC2-206ENST00000439117 NFE2L3Q9Y4A8 694 aa16.67■□□□□ 0.26
TSC2-206ENST00000439117 SPDYE3A6NKU9 549 aa16.67■□□□□ 0.26
TSC2-206ENST00000439117 RFC1P35251 1148 aaPredicted RBP16.67■□□□□ 0.26
TSC2-206ENST00000439117 SNCBQ16143 134 aa16.67■□□□□ 0.26
TSC2-206ENST00000439117 APBB1IPQ7Z5R6 666 aaPredicted RBP16.67■□□□□ 0.26
TSC2-206ENST00000439117 LRRC8AQ8IWT6 810 aa16.67■□□□□ 0.26
TSC2-206ENST00000439117 ZBTB38Q8NAP3 1195 aaPredicted RBP16.67■□□□□ 0.26
TSC2-206ENST00000439117 EXOC4Q96A65 974 aa16.67■□□□□ 0.26
TSC2-206ENST00000439117 SAR1BQ9Y6B6 198 aa16.67■□□□□ 0.26
TSC2-206ENST00000439117 PCCAP05165 728 aaPredicted RBP16.67■□□□□ 0.26
TSC2-206ENST00000439117 ZAP70P43403 619 aa16.67■□□□□ 0.26
TSC2-206ENST00000439117 SEL1L2Q5TEA6 688 aa16.67■□□□□ 0.26
TSC2-206ENST00000439117 SAP30BPQ9UHR5 308 aaKnown RBP16.67■□□□□ 0.26
TSC2-206ENST00000439117 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.67■□□□□ 0.26
TSC2-206ENST00000439117 ANKARQ7Z5J8 1434 aa16.67■□□□□ 0.26
TSC2-206ENST00000439117 LRMPQ12912 555 aa16.66■□□□□ 0.26
TSC2-206ENST00000439117 GKAP1Q5VSY0 366 aaPredicted RBP16.66■□□□□ 0.26
TSC2-206ENST00000439117 RPUSD2Q8IZ73 545 aaKnown RBP16.66■□□□□ 0.26
TSC2-206ENST00000439117 A2ML1A8K2U0 1454 aa16.66■□□□□ 0.26
TSC2-206ENST00000439117 MAP3K4Q9Y6R4 1608 aa16.66■□□□□ 0.26
TSC2-206ENST00000439117 CCDC62Q6P9F0 684 aa16.66■□□□□ 0.26
TSC2-206ENST00000439117 VPS16Q9H269 839 aa16.66■□□□□ 0.26
TSC2-206ENST00000439117 TRPC5Q9UL62 973 aaPredicted RBP16.66■□□□□ 0.26
TSC2-206ENST00000439117 ZNF335Q9H4Z2 1342 aaPredicted RBP16.66■□□□□ 0.26
TSC2-206ENST00000439117 BAG6P46379 1132 aa16.66■□□□□ 0.26
TSC2-206ENST00000439117 APBA1Q02410 837 aa16.66■□□□□ 0.26
TSC2-206ENST00000439117 PHLDB3Q6NSJ2 640 aa16.66■□□□□ 0.26
TSC2-206ENST00000439117 IQGAP3Q86VI3 1631 aa16.66■□□□□ 0.26
TSC2-206ENST00000439117 CETN3O15182 167 aa16.66■□□□□ 0.26
TSC2-206ENST00000439117 RNF40O75150 1001 aa16.66■□□□□ 0.26
TSC2-206ENST00000439117 KRT71Q3SY84 523 aa16.66■□□□□ 0.26
TSC2-206ENST00000439117 ASAP1Q9ULH1 1129 aa16.66■□□□□ 0.26
TSC2-206ENST00000439117 SNX14Q9Y5W7 946 aa16.66■□□□□ 0.26
TSC2-206ENST00000439117 NDUFB9Q9Y6M9 179 aa16.66■□□□□ 0.26
TSC2-206ENST00000439117 ZNF202O95125 648 aa16.65■□□□□ 0.26
TSC2-206ENST00000439117 MYCNP04198 464 aaPredicted RBP16.65■□□□□ 0.26
TSC2-206ENST00000439117 PARP1P09874 1014 aaKnown RBP16.65■□□□□ 0.26
TSC2-206ENST00000439117 PLCB3Q01970 1234 aa16.65■□□□□ 0.26
TSC2-206ENST00000439117 MTX1Q13505 466 aa16.65■□□□□ 0.26
TSC2-206ENST00000439117 CUTAO60888 179 aa16.65■□□□□ 0.26
TSC2-206ENST00000439117 PEX19P40855 299 aa16.65■□□□□ 0.26
TSC2-206ENST00000439117 RAB3IPQ96QF0 476 aaPredicted RBP16.65■□□□□ 0.26
TSC2-206ENST00000439117 NOC4LQ9BVI4 516 aaKnown RBP16.65■□□□□ 0.26
TSC2-206ENST00000439117 MAP3K15Q6ZN16 1313 aa16.65■□□□□ 0.26
TSC2-206ENST00000439117 FAM173BQ6P4H8 233 aa16.65■□□□□ 0.26
TSC2-206ENST00000439117 VPS52Q8N1B4 723 aa16.65■□□□□ 0.26
TSC2-206ENST00000439117 FLAD1Q8NFF5 587 aa16.65■□□□□ 0.26
TSC2-206ENST00000439117 ANGEL1Q9UNK9 670 aaKnown RBP16.65■□□□□ 0.26
TSC2-206ENST00000439117 SYNRGQ9UMZ2 1314 aa16.65■□□□□ 0.26
TSC2-206ENST00000439117 ALDH1B1P30837 517 aa16.65■□□□□ 0.26
TSC2-206ENST00000439117 TRMT2AQ8IZ69 625 aaKnown RBP16.65■□□□□ 0.26
TSC2-206ENST00000439117 PPANQ9NQ55 473 aaKnown RBP16.65■□□□□ 0.26
TSC2-206ENST00000439117 CSRNP2Q9H175 543 aa16.64■□□□□ 0.26
TSC2-206ENST00000439117 LRRD1A4D1F6 860 aa16.64■□□□□ 0.25
TSC2-206ENST00000439117 PSMC4P43686 418 aa16.64■□□□□ 0.25
TSC2-206ENST00000439117 ZNF131P52739 623 aa16.64■□□□□ 0.25
TSC2-206ENST00000439117 TPD52P55327 224 aaPredicted RBP16.64■□□□□ 0.25
TSC2-206ENST00000439117 CLUL1Q15846 466 aa16.64■□□□□ 0.25
TSC2-206ENST00000439117 CCDC170Q8IYT3 715 aa16.64■□□□□ 0.25
TSC2-206ENST00000439117 LARGE2Q8N3Y3 721 aa16.64■□□□□ 0.25
TSC2-206ENST00000439117 SH2D4AQ9H788 454 aa16.64■□□□□ 0.25
TSC2-206ENST00000439117 AATFQ9NY61 560 aaKnown RBP eCLIP16.64■□□□□ 0.25
TSC2-206ENST00000439117 MAGEA1P43355 309 aa16.64■□□□□ 0.25
TSC2-206ENST00000439117 SUPT20HQ8NEM7 779 aa16.64■□□□□ 0.25
TSC2-206ENST00000439117 TACO1Q9BSH4 297 aaKnown RBP16.64■□□□□ 0.25
TSC2-206ENST00000439117 ZNF532Q9HCE3 1301 aa16.64■□□□□ 0.25
TSC2-206ENST00000439117 MUM1Q2TAK8 710 aa16.64■□□□□ 0.25
TSC2-206ENST00000439117 KRT79Q5XKE5 535 aa16.64■□□□□ 0.25
TSC2-206ENST00000439117 TBC1D22AQ8WUA7 517 aa16.64■□□□□ 0.25
TSC2-206ENST00000439117 SLC9C1Q4G0N8 1177 aa16.63■□□□□ 0.25
TSC2-206ENST00000439117 FCHSD1Q86WN1 690 aa16.63■□□□□ 0.25
TSC2-206ENST00000439117 GBP7Q8N8V2 638 aaPredicted RBP16.63■□□□□ 0.25
TSC2-206ENST00000439117 PDE11AQ9HCR9 933 aa16.63■□□□□ 0.25
TSC2-206ENST00000439117 DDX41Q9UJV9 622 aaKnown RBP16.63■□□□□ 0.25
TSC2-206ENST00000439117 PYCARDQ9ULZ3 195 aa16.63■□□□□ 0.25
TSC2-206ENST00000439117 CCT5P48643 541 aa16.63■□□□□ 0.25
TSC2-206ENST00000439117 CFAP157Q5JU67 520 aa16.63■□□□□ 0.25
TSC2-206ENST00000439117 DTHD1Q6ZMT9 781 aa16.63■□□□□ 0.25
TSC2-206ENST00000439117 CCDC97Q96F63 343 aaPredicted RBP16.63■□□□□ 0.25
TSC2-206ENST00000439117 ODF2LQ9ULJ1 636 aa16.63■□□□□ 0.25
TSC2-206ENST00000439117 PRDM1O75626 825 aa16.63■□□□□ 0.25
TSC2-206ENST00000439117 ICE2Q659A1 982 aa16.63■□□□□ 0.25
TSC2-206ENST00000439117 IQCDQ96DY2 449 aa16.63■□□□□ 0.25
TSC2-206ENST00000439117 GJA3Q9Y6H8 435 aa16.63■□□□□ 0.25
TSC2-206ENST00000439117 EAF2Q96CJ1 260 aaPredicted RBP16.63■□□□□ 0.25
TSC2-206ENST00000439117 BICD1Q96G01 975 aa16.63■□□□□ 0.25
TSC2-206ENST00000439117 QTRT2Q9H974 415 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms