RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 MFSD14AQ96MC6 490 aa5.89□□□□□ -1.47
LSM1P1-201ENST00000438629 MIPEPQ99797 713 aa5.89□□□□□ -1.47
LSM1P1-201ENST00000438629 DUSP23Q9BVJ7 150 aa5.89□□□□□ -1.47
LSM1P1-201ENST00000438629 PRKAG3Q9UGI9 489 aa5.89□□□□□ -1.47
LSM1P1-201ENST00000438629 DYRK3O43781 588 aa5.88□□□□□ -1.47
LSM1P1-201ENST00000438629 FAM87AP0C7U9 286 aa5.88□□□□□ -1.47
LSM1P1-201ENST00000438629 RBL2Q08999 1139 aa5.88□□□□□ -1.47
LSM1P1-201ENST00000438629 FBXL6Q8N531 539 aa5.88□□□□□ -1.47
LSM1P1-201ENST00000438629 TOP6BLQ8N6T0 577 aa5.88□□□□□ -1.47
LSM1P1-201ENST00000438629 KIF2CQ99661 725 aa5.88□□□□□ -1.47
LSM1P1-201ENST00000438629 DPH2Q9BQC3 489 aaPredicted RBP5.88□□□□□ -1.47
LSM1P1-201ENST00000438629 OSBPL1AQ9BXW6 950 aa5.88□□□□□ -1.47
LSM1P1-201ENST00000438629 ANTXR1Q9H6X2 564 aa5.88□□□□□ -1.47
LSM1P1-201ENST00000438629 MRVI1Q9Y6F6 885 aa5.88□□□□□ -1.47
LSM1P1-201ENST00000438629 WDR64B1ANS9 1081 aa5.87□□□□□ -1.47
LSM1P1-201ENST00000438629 IGF2BP3O00425 579 aaKnown RBP eCLIP5.87□□□□□ -1.47
LSM1P1-201ENST00000438629 DNAJA2O60884 412 aa5.87□□□□□ -1.47
LSM1P1-201ENST00000438629 SLITRK5O94991 958 aa5.87□□□□□ -1.47
LSM1P1-201ENST00000438629 ETFBP38117 255 aa5.87□□□□□ -1.47
LSM1P1-201ENST00000438629 PPP2R5EQ16537 467 aa5.87□□□□□ -1.47
LSM1P1-201ENST00000438629 BBS9Q3SYG4 887 aa5.87□□□□□ -1.47
LSM1P1-201ENST00000438629 NBPF6Q5VWK0 638 aa5.87□□□□□ -1.47
LSM1P1-201ENST00000438629 XAGE3Q8WTP9 111 aa5.87□□□□□ -1.47
LSM1P1-201ENST00000438629 GATA6Q92908 595 aa5.87□□□□□ -1.47
LSM1P1-201ENST00000438629 NBPF4Q96M43 638 aa5.87□□□□□ -1.47
LSM1P1-201ENST00000438629 ZNF408Q9H9D4 720 aa5.87□□□□□ -1.47
LSM1P1-201ENST00000438629 TPX2Q9ULW0 747 aaKnown RBP5.87□□□□□ -1.47
LSM1P1-201ENST00000438629 SMAD7O15105 426 aaKnown RBP5.86□□□□□ -1.47
LSM1P1-201ENST00000438629 F13BP05160 661 aa5.86□□□□□ -1.47
LSM1P1-201ENST00000438629 ADMP35318 185 aa5.86□□□□□ -1.47
LSM1P1-201ENST00000438629 KIR3DL1P43629 444 aa5.86□□□□□ -1.47
LSM1P1-201ENST00000438629 RNF4P78317 190 aa5.86□□□□□ -1.47
LSM1P1-201ENST00000438629 CDH24Q86UP0 819 aa5.86□□□□□ -1.47
LSM1P1-201ENST00000438629 SHKBP1Q8TBC3 707 aa5.86□□□□□ -1.47
LSM1P1-201ENST00000438629 BAHD1Q8TBE0 780 aaPredicted RBP5.86□□□□□ -1.47
LSM1P1-201ENST00000438629 SLC9A7Q96T83 725 aa5.86□□□□□ -1.47
LSM1P1-201ENST00000438629 PHAXQ9H814 394 aaKnown RBP5.86□□□□□ -1.47
LSM1P1-201ENST00000438629 PRDM5Q9NQX1 630 aaPredicted RBP5.86□□□□□ -1.47
LSM1P1-201ENST00000438629 USP35Q9P2H5 1018 aa5.86□□□□□ -1.47
LSM1P1-201ENST00000438629 MAPK8IP1Q9UQF2 711 aa5.86□□□□□ -1.47
LSM1P1-201ENST00000438629 LEMD3Q9Y2U8 911 aa5.86□□□□□ -1.47
LSM1P1-201ENST00000438629 A0A1W2PQH9 124 aa5.85□□□□□ -1.47
LSM1P1-201ENST00000438629 U2SURPO15042 1029 aaKnown RBP5.85□□□□□ -1.47
LSM1P1-201ENST00000438629 CLEC3AO75596 197 aa5.85□□□□□ -1.47
LSM1P1-201ENST00000438629 EOMESO95936 686 aa5.85□□□□□ -1.47
LSM1P1-201ENST00000438629 FXNQ16595 210 aa5.85□□□□□ -1.47
LSM1P1-201ENST00000438629 SFRP5Q5T4F7 317 aa5.85□□□□□ -1.47
LSM1P1-201ENST00000438629 UNC5AQ6ZN44 842 aa5.85□□□□□ -1.47
LSM1P1-201ENST00000438629 RUFY4Q6ZNE9 571 aa5.85□□□□□ -1.47
LSM1P1-201ENST00000438629 ARHGAP27Q6ZUM4 889 aa5.85□□□□□ -1.47
LSM1P1-201ENST00000438629 ANKS3Q6ZW76 656 aa5.85□□□□□ -1.47
LSM1P1-201ENST00000438629 TTC6Q86TZ1 520 aa5.85□□□□□ -1.47
LSM1P1-201ENST00000438629 DNAJB8Q8NHS0 232 aa5.85□□□□□ -1.47
LSM1P1-201ENST00000438629 SMARCC1Q92922 1105 aaPredicted RBP5.85□□□□□ -1.47
LSM1P1-201ENST00000438629 ASPNQ9BXN1 380 aa5.85□□□□□ -1.47
LSM1P1-201ENST00000438629 SEMA6BQ9H3T3 888 aa5.85□□□□□ -1.47
LSM1P1-201ENST00000438629 MKNK2Q9HBH9 465 aa5.85□□□□□ -1.47
LSM1P1-201ENST00000438629 ACTR10Q9NZ32 417 aa5.85□□□□□ -1.47
LSM1P1-201ENST00000438629 KCNH3Q9ULD8 1083 aa5.85□□□□□ -1.47
LSM1P1-201ENST00000438629 FAM170BA6NMN3 283 aa5.84□□□□□ -1.47
LSM1P1-201ENST00000438629 GNAT3A8MTJ3 354 aa5.84□□□□□ -1.47
LSM1P1-201ENST00000438629 LEFTY1O75610 366 aa5.84□□□□□ -1.47
LSM1P1-201ENST00000438629 UBOX5O94941 541 aa5.84□□□□□ -1.47
LSM1P1-201ENST00000438629 FURINP09958 794 aa5.84□□□□□ -1.47
LSM1P1-201ENST00000438629 ACRP10323 421 aa5.84□□□□□ -1.47
LSM1P1-201ENST00000438629 PMS1P54277 932 aaKnown RBP5.84□□□□□ -1.47
LSM1P1-201ENST00000438629 C22orf34Q6ZV56 151 aa5.84□□□□□ -1.47
LSM1P1-201ENST00000438629 ZNF765Q7L2R6 523 aa5.84□□□□□ -1.47
LSM1P1-201ENST00000438629 RIN3Q8TB24 985 aa5.84□□□□□ -1.47
LSM1P1-201ENST00000438629 PPP1R13LQ8WUF5 828 aa5.84□□□□□ -1.47
LSM1P1-201ENST00000438629 RNF141Q8WVD5 230 aa5.84□□□□□ -1.47
LSM1P1-201ENST00000438629 DHX38Q92620 1227 aaKnown RBP5.84□□□□□ -1.47
LSM1P1-201ENST00000438629 FBXL18Q96ME1 805 aa5.84□□□□□ -1.47
LSM1P1-201ENST00000438629 KREMEN1Q96MU8 473 aa5.84□□□□□ -1.47
LSM1P1-201ENST00000438629 TRIM55Q9BYV6 548 aa5.84□□□□□ -1.47
LSM1P1-201ENST00000438629 PIM2Q9P1W9 311 aa5.84□□□□□ -1.47
LSM1P1-201ENST00000438629 SUCOQ9UBS9 1254 aaKnown RBP5.84□□□□□ -1.47
LSM1P1-201ENST00000438629 CYP26A1O43174 497 aa5.83□□□□□ -1.48
LSM1P1-201ENST00000438629 GRIK1P39086 918 aa5.83□□□□□ -1.48
LSM1P1-201ENST00000438629 NCAPHQ15003 741 aa5.83□□□□□ -1.48
LSM1P1-201ENST00000438629 FAM214BQ7L5A3 538 aa5.83□□□□□ -1.48
LSM1P1-201ENST00000438629 FAM169BQ8N8A8 192 aa5.83□□□□□ -1.48
LSM1P1-201ENST00000438629 PIWIL2Q8TC59 973 aaKnown RBP5.83□□□□□ -1.48
LSM1P1-201ENST00000438629 ZNF214Q9UL59 606 aaPredicted RBP5.83□□□□□ -1.48
LSM1P1-201ENST00000438629 KLF4O43474 513 aa5.82□□□□□ -1.48
LSM1P1-201ENST00000438629 POLR2BP30876 1174 aaKnown RBP5.82□□□□□ -1.48
LSM1P1-201ENST00000438629 SLC7A5Q01650 507 aa5.82□□□□□ -1.48
LSM1P1-201ENST00000438629 RAB33AQ14088 237 aa5.82□□□□□ -1.48
LSM1P1-201ENST00000438629 PRSS36Q5K4E3 855 aa5.82□□□□□ -1.48
LSM1P1-201ENST00000438629 INTS5Q6P9B9 1019 aaKnown RBP5.82□□□□□ -1.48
LSM1P1-201ENST00000438629 ZDHHC13Q8IUH4 622 aa5.82□□□□□ -1.48
LSM1P1-201ENST00000438629 HEXIM2Q96MH2 286 aaKnown RBP5.82□□□□□ -1.48
LSM1P1-201ENST00000438629 SLC6A18Q96N87 628 aa5.82□□□□□ -1.48
LSM1P1-201ENST00000438629 ASCC2Q9H1I8 757 aaPredicted RBP5.82□□□□□ -1.48
LSM1P1-201ENST00000438629 SIRPGQ9P1W8 387 aa5.82□□□□□ -1.48
LSM1P1-201ENST00000438629 K7ELQ4 463 aaPredicted RBP5.81□□□□□ -1.48
LSM1P1-201ENST00000438629 ZNF865P0CJ78 1059 aaPredicted RBP5.81□□□□□ -1.48
LSM1P1-201ENST00000438629 NAT2P11245 290 aa5.81□□□□□ -1.48
LSM1P1-201ENST00000438629 GNPTABQ3T906 1256 aa5.81□□□□□ -1.48
LSM1P1-201ENST00000438629 ANKRD39Q53RE8 183 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms