RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 PDS5AQ29RF7 1337 aaKnown RBP10.68□□□□□ -0.7
SCRN1-208ENST00000438497 USP17L15C9J2P7 530 aa10.68□□□□□ -0.7
SCRN1-208ENST00000438497 USP17L13C9JLJ4 530 aa10.68□□□□□ -0.7
SCRN1-208ENST00000438497 USP17L11C9JVI0 530 aa10.68□□□□□ -0.7
SCRN1-208ENST00000438497 USP17L18D6R9N7 530 aa10.68□□□□□ -0.7
SCRN1-208ENST00000438497 USP17L22D6RA61 530 aa10.68□□□□□ -0.7
SCRN1-208ENST00000438497 USP17L17D6RBQ6 530 aa10.68□□□□□ -0.7
SCRN1-208ENST00000438497 USP17L19D6RCP7 530 aa10.68□□□□□ -0.7
SCRN1-208ENST00000438497 USP17L20D6RJB6 530 aa10.68□□□□□ -0.7
SCRN1-208ENST00000438497 CNMDO75829 334 aa10.68□□□□□ -0.7
SCRN1-208ENST00000438497 RAG1P15918 1043 aa10.68□□□□□ -0.7
SCRN1-208ENST00000438497 DNAJB2P25686 324 aa10.68□□□□□ -0.7
SCRN1-208ENST00000438497 HOXD11P31277 338 aaPredicted RBP10.68□□□□□ -0.7
SCRN1-208ENST00000438497 EPHB4P54760 987 aa10.68□□□□□ -0.7
SCRN1-208ENST00000438497 MRPS5P82675 430 aaKnown RBP10.68□□□□□ -0.7
SCRN1-208ENST00000438497 USP17L24Q0WX57 530 aa10.68□□□□□ -0.7
SCRN1-208ENST00000438497 SNX17Q15036 470 aa10.68□□□□□ -0.7
SCRN1-208ENST00000438497 CRACR2BQ8N4Y2 399 aaPredicted RBP10.68□□□□□ -0.7
SCRN1-208ENST00000438497 ADAMTS19Q8TE59 1207 aa10.68□□□□□ -0.7
SCRN1-208ENST00000438497 NSUN4Q96CB9 384 aaKnown RBP10.68□□□□□ -0.7
SCRN1-208ENST00000438497 NOL10Q9BSC4 688 aaKnown RBP10.68□□□□□ -0.7
SCRN1-208ENST00000438497 RAI14Q9P0K7 980 aa10.68□□□□□ -0.7
SCRN1-208ENST00000438497 SEPT4O43236 478 aa10.67□□□□□ -0.7
SCRN1-208ENST00000438497 GDF11O95390 407 aa10.67□□□□□ -0.7
SCRN1-208ENST00000438497 CYBAP13498 195 aa10.67□□□□□ -0.7
SCRN1-208ENST00000438497 ITGB8P26012 769 aa10.67□□□□□ -0.7
SCRN1-208ENST00000438497 CCDC85BQ15834 202 aaPredicted RBP10.67□□□□□ -0.7
SCRN1-208ENST00000438497 C1orf53Q5VUE5 145 aa10.67□□□□□ -0.7
SCRN1-208ENST00000438497 CATSPERGQ6ZRH7 1159 aa10.67□□□□□ -0.7
SCRN1-208ENST00000438497 TBC1D9Q6ZT07 1266 aa10.67□□□□□ -0.7
SCRN1-208ENST00000438497 MRPL50Q8N5N7 158 aaKnown RBP10.67□□□□□ -0.7
SCRN1-208ENST00000438497 IL27Q8NEV9 243 aa10.67□□□□□ -0.7
SCRN1-208ENST00000438497 XAGE2Q96GT9 111 aa10.67□□□□□ -0.7
SCRN1-208ENST00000438497 NEUROD6Q96NK8 337 aa10.67□□□□□ -0.7
SCRN1-208ENST00000438497 UHRF1Q96T88 793 aaPredicted RBP10.67□□□□□ -0.7
SCRN1-208ENST00000438497 THEGQ9P2T0 379 aa10.67□□□□□ -0.7
SCRN1-208ENST00000438497 MYO9BQ13459 2157 aa10.67□□□□□ -0.7
SCRN1-208ENST00000438497 STRNO43815 780 aa10.66□□□□□ -0.7
SCRN1-208ENST00000438497 CLTBP09497 229 aa10.66□□□□□ -0.7
SCRN1-208ENST00000438497 FPGSQ05932 587 aa10.66□□□□□ -0.7
SCRN1-208ENST00000438497 GRB14Q14449 540 aa10.66□□□□□ -0.7
SCRN1-208ENST00000438497 LRRC41Q15345 812 aa10.66□□□□□ -0.7
SCRN1-208ENST00000438497 ZYXQ15942 572 aaKnown RBP10.66□□□□□ -0.7
SCRN1-208ENST00000438497 SHROOM1Q2M3G4 852 aaPredicted RBP10.66□□□□□ -0.7
SCRN1-208ENST00000438497 PRAMEF19Q5SWL8 479 aa10.66□□□□□ -0.7
SCRN1-208ENST00000438497 AKNAD1Q5T1N1 836 aa10.66□□□□□ -0.7
SCRN1-208ENST00000438497 SH3RF3Q8TEJ3 882 aaPredicted RBP10.66□□□□□ -0.7
SCRN1-208ENST00000438497 TIFAQ96CG3 184 aa10.66□□□□□ -0.7
SCRN1-208ENST00000438497 C1QTNF1Q9BXJ1 281 aa10.66□□□□□ -0.7
SCRN1-208ENST00000438497 BTBD7Q9P203 1132 aa10.66□□□□□ -0.7
SCRN1-208ENST00000438497 ZBTB21Q9ULJ3 1066 aa10.66□□□□□ -0.7
SCRN1-208ENST00000438497 PA2G4Q9UQ80 394 aaKnown RBP10.66□□□□□ -0.7
SCRN1-208ENST00000438497 AKAP2Q9Y2D5 859 aa10.66□□□□□ -0.7
SCRN1-208ENST00000438497 PTPRCP08575 1304 aa10.65□□□□□ -0.7
SCRN1-208ENST00000438497 KIAA0355O15063 1070 aa10.65□□□□□ -0.7
SCRN1-208ENST00000438497 BAG3O95817 575 aa10.65□□□□□ -0.7
SCRN1-208ENST00000438497 IGHA2P01877 340 aa10.65□□□□□ -0.7
SCRN1-208ENST00000438497 MVPQ14764 893 aaKnown RBP10.65□□□□□ -0.7
SCRN1-208ENST00000438497 GORABQ5T7V8 394 aa10.65□□□□□ -0.7
SCRN1-208ENST00000438497 OLFML2BQ68BL8 750 aa10.65□□□□□ -0.7
SCRN1-208ENST00000438497 CCDC129Q6ZRS4 1044 aa10.65□□□□□ -0.7
SCRN1-208ENST00000438497 METTL16Q86W50 562 aaKnown RBP10.65□□□□□ -0.7
SCRN1-208ENST00000438497 MAPKAPK5Q8IW41 473 aa10.65□□□□□ -0.7
SCRN1-208ENST00000438497 SPATA5Q8NB90 893 aa10.65□□□□□ -0.7
SCRN1-208ENST00000438497 TGFBRAP1Q8WUH2 860 aa10.65□□□□□ -0.7
SCRN1-208ENST00000438497 PRDM12Q9H4Q4 367 aa10.65□□□□□ -0.7
SCRN1-208ENST00000438497 DNAJC18Q9H819 358 aa10.65□□□□□ -0.7
SCRN1-208ENST00000438497 TMEM39AQ9NV64 488 aa10.65□□□□□ -0.7
SCRN1-208ENST00000438497 HMG20BQ9P0W2 317 aa10.65□□□□□ -0.7
SCRN1-208ENST00000438497 LRP2BPQ9P2M1 347 aa10.65□□□□□ -0.7
SCRN1-208ENST00000438497 PALD1Q9ULE6 856 aa10.65□□□□□ -0.7
SCRN1-208ENST00000438497 SMCHD1A6NHR9 2005 aa10.65□□□□□ -0.71
SCRN1-208ENST00000438497 A0A1B0GUL7 405 aa10.64□□□□□ -0.71
SCRN1-208ENST00000438497 UBTFL1P0CB47 393 aaPredicted RBP10.64□□□□□ -0.71
SCRN1-208ENST00000438497 PLCG2P16885 1265 aa10.64□□□□□ -0.71
SCRN1-208ENST00000438497 IGFBP4P22692 258 aa10.64□□□□□ -0.71
SCRN1-208ENST00000438497 USP14P54578 494 aa10.64□□□□□ -0.71
SCRN1-208ENST00000438497 C12orf42Q96LP6 360 aa10.64□□□□□ -0.71
SCRN1-208ENST00000438497 FEZ1Q99689 392 aa10.64□□□□□ -0.71
SCRN1-208ENST00000438497 COPRSQ9NQ92 184 aa10.64□□□□□ -0.71
SCRN1-208ENST00000438497 AATFQ9NY61 560 aaKnown RBP eCLIP10.64□□□□□ -0.71
SCRN1-208ENST00000438497 SLC5A4Q9NY91 659 aa10.64□□□□□ -0.71
SCRN1-208ENST00000438497 HDAC5Q9UQL6 1122 aa10.64□□□□□ -0.71
SCRN1-208ENST00000438497 TCF20Q9UGU0 1960 aaKnown RBP10.64□□□□□ -0.71
SCRN1-208ENST00000438497 NCOR1O75376 2440 aa10.63□□□□□ -0.71
SCRN1-208ENST00000438497 GRXCR1A8MXD5 290 aa10.63□□□□□ -0.71
SCRN1-208ENST00000438497 DCDC2CA8MYV0 355 aa10.63□□□□□ -0.71
SCRN1-208ENST00000438497 PQBP1O60828 265 aaKnown RBP10.63□□□□□ -0.71
SCRN1-208ENST00000438497 COBLO75128 1261 aa10.63□□□□□ -0.71
SCRN1-208ENST00000438497 GH2P01242 217 aa10.63□□□□□ -0.71
SCRN1-208ENST00000438497 ADORA2AP29274 412 aa10.63□□□□□ -0.71
SCRN1-208ENST00000438497 PPP4CP60510 307 aa10.63□□□□□ -0.71
SCRN1-208ENST00000438497 TFCP2Q12800 502 aa10.63□□□□□ -0.71
SCRN1-208ENST00000438497 PI16Q6UXB8 463 aa10.63□□□□□ -0.71
SCRN1-208ENST00000438497 ATF7IPQ6VMQ6 1270 aa10.63□□□□□ -0.71
SCRN1-208ENST00000438497 LBX2Q6XYB7 198 aa10.63□□□□□ -0.71
SCRN1-208ENST00000438497 SLC44A5Q8NCS7 719 aa10.63□□□□□ -0.71
SCRN1-208ENST00000438497 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.63□□□□□ -0.71
SCRN1-208ENST00000438497 TSPYL2Q9H2G4 693 aaPredicted RBP10.63□□□□□ -0.71
SCRN1-208ENST00000438497 HOXC10Q9NYD6 342 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms