RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 DPEP1P16444 411 aa29.65■■■□□ 2.34
CPNE1-216ENST00000437340 RHBDL3P58872 404 aa29.65■■■□□ 2.34
CPNE1-216ENST00000437340 RILPL1Q5EBL4 403 aa29.65■■■□□ 2.34
CPNE1-216ENST00000437340 MAPKAPK5Q8IW41 473 aa29.65■■■□□ 2.34
CPNE1-216ENST00000437340 ZNF219Q9P2Y4 722 aaPredicted RBP29.65■■■□□ 2.34
CPNE1-216ENST00000437340 PLEKHA8P1O95397 391 aa29.64■■■□□ 2.34
CPNE1-216ENST00000437340 DYNLL2Q96FJ2 89 aa29.64■■■□□ 2.34
CPNE1-216ENST00000437340 BRCA1P38398 1863 aaKnown RBP29.64■■■□□ 2.34
CPNE1-216ENST00000437340 A0A1B0GVL5 298 aa29.64■■■□□ 2.34
CPNE1-216ENST00000437340 RIMBP2O15034 1052 aa29.64■■■□□ 2.34
CPNE1-216ENST00000437340 KCNA3P22001 575 aa29.64■■■□□ 2.34
CPNE1-216ENST00000437340 KIF5BP33176 963 aa29.64■■■□□ 2.34
CPNE1-216ENST00000437340 ANO6Q4KMQ2 910 aa29.64■■■□□ 2.34
CPNE1-216ENST00000437340 C7orf43Q8WVR3 580 aa29.64■■■□□ 2.34
CPNE1-216ENST00000437340 KAT14Q9H8E8 782 aa29.64■■■□□ 2.34
CPNE1-216ENST00000437340 USP25Q9UHP3 1055 aa29.64■■■□□ 2.34
CPNE1-216ENST00000437340 NDUFA8P51970 172 aa29.63■■■□□ 2.33
CPNE1-216ENST00000437340 ZNF444Q8N0Y2 327 aaPredicted RBP29.63■■■□□ 2.33
CPNE1-216ENST00000437340 EYA3Q99504 573 aa29.63■■■□□ 2.33
CPNE1-216ENST00000437340 IL17RBQ9NRM6 502 aa29.63■■■□□ 2.33
CPNE1-216ENST00000437340 V9GY48 417 aaPredicted RBP29.63■■■□□ 2.33
CPNE1-216ENST00000437340 DDX60LQ5H9U9 1706 aaKnown RBP29.63■■■□□ 2.33
CPNE1-216ENST00000437340 FLT1P17948 1338 aa29.63■■■□□ 2.33
CPNE1-216ENST00000437340 CNTNAP5Q8WYK1 1306 aa29.63■■■□□ 2.33
CPNE1-216ENST00000437340 PLCD1P51178 756 aa29.62■■■□□ 2.33
CPNE1-216ENST00000437340 ZSCAN30Q86W11 494 aa29.62■■■□□ 2.33
CPNE1-216ENST00000437340 CCDC39Q9UFE4 941 aa29.62■■■□□ 2.33
CPNE1-216ENST00000437340 TAOK2Q9UL54 1235 aa29.62■■■□□ 2.33
CPNE1-216ENST00000437340 SNED1Q8TER0 1413 aa29.62■■■□□ 2.33
CPNE1-216ENST00000437340 WDHD1O75717 1129 aaPredicted RBP29.62■■■□□ 2.33
CPNE1-216ENST00000437340 TSPY3P0CV98 308 aa29.62■■■□□ 2.33
CPNE1-216ENST00000437340 TSPY8P0CW00 308 aa29.62■■■□□ 2.33
CPNE1-216ENST00000437340 C16orf86Q6ZW13 317 aa29.62■■■□□ 2.33
CPNE1-216ENST00000437340 PHF20Q9BVI0 1012 aa29.62■■■□□ 2.33
CPNE1-216ENST00000437340 MYH6P13533 1939 aa29.61■■■□□ 2.33
CPNE1-216ENST00000437340 CDK5RAP2Q96SN8 1893 aa29.61■■■□□ 2.33
CPNE1-216ENST00000437340 FAM237AA0A1B0GTK4 181 aa29.61■■■□□ 2.33
CPNE1-216ENST00000437340 DAGLAQ9Y4D2 1042 aa29.61■■■□□ 2.33
CPNE1-216ENST00000437340 CUTAO60888 179 aa29.6■■■□□ 2.33
CPNE1-216ENST00000437340 MARCKSP29966 332 aaPredicted RBP29.6■■■□□ 2.33
CPNE1-216ENST00000437340 CLCN1P35523 988 aa29.6■■■□□ 2.33
CPNE1-216ENST00000437340 PTGER2P43116 358 aa29.6■■■□□ 2.33
CPNE1-216ENST00000437340 STX1AQ16623 288 aa29.6■■■□□ 2.33
CPNE1-216ENST00000437340 SLC4A8Q2Y0W8 1093 aa29.6■■■□□ 2.33
CPNE1-216ENST00000437340 SRBD1Q8N5C6 995 aaKnown RBP29.6■■■□□ 2.33
CPNE1-216ENST00000437340 ADCY5O95622 1261 aa29.59■■■□□ 2.33
CPNE1-216ENST00000437340 RASA1P20936 1047 aa29.59■■■□□ 2.33
CPNE1-216ENST00000437340 TTLL6Q8N841 843 aa29.59■■■□□ 2.33
CPNE1-216ENST00000437340 SDF4Q9BRK5 362 aa29.59■■■□□ 2.33
CPNE1-216ENST00000437340 CBX8Q9HC52 389 aa29.59■■■□□ 2.33
CPNE1-216ENST00000437340 SAP30BPQ9UHR5 308 aaKnown RBP29.59■■■□□ 2.33
CPNE1-216ENST00000437340 MORC2Q9Y6X9 1032 aaPredicted RBP29.59■■■□□ 2.33
CPNE1-216ENST00000437340 TOB1P50616 345 aaPredicted RBP29.59■■■□□ 2.33
CPNE1-216ENST00000437340 TIGD1Q96MW7 591 aa29.59■■■□□ 2.33
CPNE1-216ENST00000437340 PFKFB1P16118 471 aa29.58■■■□□ 2.33
CPNE1-216ENST00000437340 KRT2P35908 639 aa29.58■■■□□ 2.33
CPNE1-216ENST00000437340 TGFB2P61812 414 aa29.58■■■□□ 2.33
CPNE1-216ENST00000437340 PNMA1Q8ND90 353 aa29.58■■■□□ 2.33
CPNE1-216ENST00000437340 BRMS1Q9HCU9 246 aa29.58■■■□□ 2.33
CPNE1-216ENST00000437340 VPS54Q9P1Q0 977 aa29.58■■■□□ 2.33
CPNE1-216ENST00000437340 NOL7Q9UMY1 257 aaKnown RBP29.58■■■□□ 2.33
CPNE1-216ENST00000437340 HPSEQ9Y251 543 aa29.58■■■□□ 2.33
CPNE1-216ENST00000437340 ZNF202O95125 648 aa29.57■■■□□ 2.32
CPNE1-216ENST00000437340 CDK8P49336 464 aa29.57■■■□□ 2.32
CPNE1-216ENST00000437340 ZNF165P49910 485 aa29.57■■■□□ 2.32
CPNE1-216ENST00000437340 GNAQP50148 359 aa29.57■■■□□ 2.32
CPNE1-216ENST00000437340 NR5A1Q13285 461 aa29.57■■■□□ 2.32
CPNE1-216ENST00000437340 CEP131Q9UPN4 1083 aa29.57■■■□□ 2.32
CPNE1-216ENST00000437340 C21orf2O43822 256 aa29.57■■■□□ 2.32
CPNE1-216ENST00000437340 RESP18Q5W5W9 173 aa29.57■■■□□ 2.32
CPNE1-216ENST00000437340 PODNQ7Z5L7 613 aa29.57■■■□□ 2.32
CPNE1-216ENST00000437340 SHISA4Q96DD7 197 aa29.57■■■□□ 2.32
CPNE1-216ENST00000437340 CERS5Q8N5B7 392 aa29.56■■■□□ 2.32
CPNE1-216ENST00000437340 KRI1Q8N9T8 703 aaKnown RBP29.56■■■□□ 2.32
CPNE1-216ENST00000437340 OXER1Q8TDS5 423 aa29.56■■■□□ 2.32
CPNE1-216ENST00000437340 DNAJC25Q9H1X3 360 aa29.56■■■□□ 2.32
CPNE1-216ENST00000437340 ANO10Q9NW15 660 aa29.56■■■□□ 2.32
CPNE1-216ENST00000437340 GRM4Q14833 912 aa29.55■■■□□ 2.32
CPNE1-216ENST00000437340 SHC4Q6S5L8 630 aa29.55■■■□□ 2.32
CPNE1-216ENST00000437340 SLC44A5Q8NCS7 719 aa29.55■■■□□ 2.32
CPNE1-216ENST00000437340 NEDD1Q8NHV4 660 aa29.55■■■□□ 2.32
CPNE1-216ENST00000437340 PPP1R1BQ9UD71 204 aaPredicted RBP29.55■■■□□ 2.32
CPNE1-216ENST00000437340 GOLGB1Q14789 3259 aaKnown RBP29.54■■■□□ 2.32
CPNE1-216ENST00000437340 USP17L3A6NCW0 530 aa29.54■■■□□ 2.32
CPNE1-216ENST00000437340 USP17L4A6NCW7 530 aa29.54■■■□□ 2.32
CPNE1-216ENST00000437340 G3V3G9 751 aa29.54■■■□□ 2.32
CPNE1-216ENST00000437340 SCG2P13521 617 aa29.54■■■□□ 2.32
CPNE1-216ENST00000437340 PFKFB3Q16875 520 aaPredicted RBP29.54■■■□□ 2.32
CPNE1-216ENST00000437340 DCAF8Q5TAQ9 597 aa29.54■■■□□ 2.32
CPNE1-216ENST00000437340 USP17L1Q7RTZ2 530 aa29.54■■■□□ 2.32
CPNE1-216ENST00000437340 LUZP1Q86V48 1076 aa29.54■■■□□ 2.32
CPNE1-216ENST00000437340 TTF2Q9UNY4 1162 aaKnown RBP29.54■■■□□ 2.32
CPNE1-216ENST00000437340 FOCADQ5VW36 1801 aa29.54■■■□□ 2.32
CPNE1-216ENST00000437340 SYKP43405 635 aa29.54■■■□□ 2.32
CPNE1-216ENST00000437340 DOK7Q18PE1 504 aa29.54■■■□□ 2.32
CPNE1-216ENST00000437340 CC2D2BQ6DHV5 1058 aa29.54■■■□□ 2.32
CPNE1-216ENST00000437340 HHIPL2Q6UWX4 724 aa29.54■■■□□ 2.32
CPNE1-216ENST00000437340 FBXW7Q969H0 707 aa29.54■■■□□ 2.32
CPNE1-216ENST00000437340 CABP5Q9NP86 173 aa29.54■■■□□ 2.32
CPNE1-216ENST00000437340 KIAA1468Q9P260 1216 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms