RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 MYLIPQ8WY64 445 aa6.29□□□□□ -1.4
HMGB1P31-201ENST00000437242 MIR1-1HGQ9H1L0 117 aa6.29□□□□□ -1.4
HMGB1P31-201ENST00000437242 TCAF2A6NFQ2 919 aa6.28□□□□□ -1.4
HMGB1P31-201ENST00000437242 NPIPB6E9PJ23 425 aa6.28□□□□□ -1.4
HMGB1P31-201ENST00000437242 PRPF40AO75400 957 aaKnown RBP6.28□□□□□ -1.4
HMGB1P31-201ENST00000437242 KRT1P04264 644 aa6.28□□□□□ -1.4
HMGB1P31-201ENST00000437242 TRIT1Q9H3H1 467 aaKnown RBP6.28□□□□□ -1.4
HMGB1P31-201ENST00000437242 HPXP02790 462 aa6.27□□□□□ -1.41
HMGB1P31-201ENST00000437242 TPP2P29144 1249 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P31-201ENST00000437242 ERVFC1P60507 584 aa6.27□□□□□ -1.41
HMGB1P31-201ENST00000437242 DIEXFQ68CQ4 756 aaKnown RBP6.27□□□□□ -1.41
HMGB1P31-201ENST00000437242 KCNK12Q9HB15 430 aa6.27□□□□□ -1.41
HMGB1P31-201ENST00000437242 RBAK-RBAKDNI3L0D1 243 aa6.26□□□□□ -1.41
HMGB1P31-201ENST00000437242 RPL6Q02878 288 aaKnown RBP6.26□□□□□ -1.41
HMGB1P31-201ENST00000437242 KCNA10Q16322 511 aa6.26□□□□□ -1.41
HMGB1P31-201ENST00000437242 TSNAXIP1Q2TAA8 658 aa6.26□□□□□ -1.41
HMGB1P31-201ENST00000437242 ATG14Q6ZNE5 492 aa6.26□□□□□ -1.41
HMGB1P31-201ENST00000437242 MCATQ8IVS2 390 aaKnown RBP6.26□□□□□ -1.41
HMGB1P31-201ENST00000437242 DNAJB8Q8NHS0 232 aa6.26□□□□□ -1.41
HMGB1P31-201ENST00000437242 Q96M66 194 aa6.26□□□□□ -1.41
HMGB1P31-201ENST00000437242 SLC26A8Q96RN1 970 aa6.26□□□□□ -1.41
HMGB1P31-201ENST00000437242 ADAMTS10Q9H324 1103 aa6.26□□□□□ -1.41
HMGB1P31-201ENST00000437242 CD320Q9NPF0 282 aa6.26□□□□□ -1.41
HMGB1P31-201ENST00000437242 GPATCH2Q9NW75 528 aa6.26□□□□□ -1.41
HMGB1P31-201ENST00000437242 DUSP13Q9UII6 198 aa6.26□□□□□ -1.41
HMGB1P31-201ENST00000437242 ADAM30Q9UKF2 790 aa6.26□□□□□ -1.41
HMGB1P31-201ENST00000437242 AK5Q9Y6K8 562 aa6.26□□□□□ -1.41
HMGB1P31-201ENST00000437242 WASH4PA8MWX3 477 aa6.25□□□□□ -1.41
HMGB1P31-201ENST00000437242 MED14OSP0DP75 135 aa6.25□□□□□ -1.41
HMGB1P31-201ENST00000437242 TFE3P19532 575 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P31-201ENST00000437242 CIAPIN1Q6FI81 312 aa6.25□□□□□ -1.41
HMGB1P31-201ENST00000437242 ACSF2Q96CM8 615 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P31-201ENST00000437242 DUSP15Q9H1R2 295 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P31-201ENST00000437242 RLBP1P12271 317 aa6.24□□□□□ -1.41
HMGB1P31-201ENST00000437242 GLDCP23378 1020 aa6.24□□□□□ -1.41
HMGB1P31-201ENST00000437242 LTKP29376 864 aa6.24□□□□□ -1.41
HMGB1P31-201ENST00000437242 EGR3Q06889 387 aa6.24□□□□□ -1.41
HMGB1P31-201ENST00000437242 GAB4Q2WGN9 574 aa6.24□□□□□ -1.41
HMGB1P31-201ENST00000437242 LILRA6Q6PI73 481 aa6.24□□□□□ -1.41
HMGB1P31-201ENST00000437242 CYB5D2Q8WUJ1 264 aa6.24□□□□□ -1.41
HMGB1P31-201ENST00000437242 DUSP9Q99956 384 aaKnown RBP6.24□□□□□ -1.41
HMGB1P31-201ENST00000437242 RNF32Q9H0A6 362 aa6.24□□□□□ -1.41
HMGB1P31-201ENST00000437242 KCNH3Q9ULD8 1083 aa6.24□□□□□ -1.41
HMGB1P31-201ENST00000437242 CEP131Q9UPN4 1083 aa6.24□□□□□ -1.41
HMGB1P31-201ENST00000437242 KRTAP9-7A8MTY7 169 aa6.23□□□□□ -1.41
HMGB1P31-201ENST00000437242 ETV2O00321 342 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P31-201ENST00000437242 TRHRP34981 398 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P31-201ENST00000437242 MEI1Q5TIA1 1274 aa6.23□□□□□ -1.41
HMGB1P31-201ENST00000437242 LILRA2Q8N149 483 aa6.23□□□□□ -1.41
HMGB1P31-201ENST00000437242 DTWD2Q8NBA8 298 aa6.23□□□□□ -1.41
HMGB1P31-201ENST00000437242 FAM13CQ8NE31 585 aa6.23□□□□□ -1.41
HMGB1P31-201ENST00000437242 PDZD8Q8NEN9 1154 aa6.23□□□□□ -1.41
HMGB1P31-201ENST00000437242 JARID2Q92833 1246 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P31-201ENST00000437242 KCNN1Q92952 543 aa6.23□□□□□ -1.41
HMGB1P31-201ENST00000437242 SYTL4Q96C24 671 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P31-201ENST00000437242 GPR62Q9BZJ7 368 aa6.23□□□□□ -1.41
HMGB1P31-201ENST00000437242 NUAK1O60285 661 aa6.22□□□□□ -1.41
HMGB1P31-201ENST00000437242 BPNT1O95861 308 aa6.22□□□□□ -1.41
HMGB1P31-201ENST00000437242 PLCG1P19174 1290 aa6.22□□□□□ -1.41
HMGB1P31-201ENST00000437242 YARSP54577 528 aaKnown RBP6.22□□□□□ -1.41
HMGB1P31-201ENST00000437242 TSPYL5Q86VY4 417 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P31-201ENST00000437242 OXR1Q8N573 874 aa6.22□□□□□ -1.41
HMGB1P31-201ENST00000437242 DHX38Q92620 1227 aaKnown RBP6.22□□□□□ -1.41
HMGB1P31-201ENST00000437242 SLC6A17Q9H1V8 727 aa6.22□□□□□ -1.41
HMGB1P31-201ENST00000437242 SMG5Q9UPR3 1016 aaKnown RBP6.22□□□□□ -1.41
HMGB1P31-201ENST00000437242 TLR6Q9Y2C9 796 aa6.22□□□□□ -1.41
HMGB1P31-201ENST00000437242 FITM1A5D6W6 292 aa6.21□□□□□ -1.42
HMGB1P31-201ENST00000437242 ZGLP1P0C6A0 271 aa6.21□□□□□ -1.42
HMGB1P31-201ENST00000437242 SRFP11831 508 aa6.21□□□□□ -1.42
HMGB1P31-201ENST00000437242 LINC00310P59036 64 aa6.21□□□□□ -1.42
HMGB1P31-201ENST00000437242 EAPPQ56P03 285 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P31-201ENST00000437242 TTLL10Q6ZVT0 673 aa6.21□□□□□ -1.42
HMGB1P31-201ENST00000437242 AMIGO3Q86WK7 504 aa6.21□□□□□ -1.42
HMGB1P31-201ENST00000437242 IRF2BP1Q8IU81 584 aa6.21□□□□□ -1.42
HMGB1P31-201ENST00000437242 PPP1R13LQ8WUF5 828 aa6.21□□□□□ -1.42
HMGB1P31-201ENST00000437242 RNF141Q8WVD5 230 aa6.21□□□□□ -1.42
HMGB1P31-201ENST00000437242 KRTAP4-2Q9BYR5 136 aa6.21□□□□□ -1.42
HMGB1P31-201ENST00000437242 C19orf44Q9H6X5 657 aa6.21□□□□□ -1.42
HMGB1P31-201ENST00000437242 RNF19AQ9NV58 838 aa6.21□□□□□ -1.42
HMGB1P31-201ENST00000437242 RAPGEFL1Q9UHV5 662 aa6.21□□□□□ -1.42
HMGB1P31-201ENST00000437242 PCDHA11Q9Y5I1 949 aa6.21□□□□□ -1.42
HMGB1P31-201ENST00000437242 CORINQ9Y5Q5 1042 aa6.21□□□□□ -1.42
HMGB1P31-201ENST00000437242 INHBBP09529 407 aa6.2□□□□□ -1.42
HMGB1P31-201ENST00000437242 TNNI2P48788 182 aa6.2□□□□□ -1.42
HMGB1P31-201ENST00000437242 NOC4LQ9BVI4 516 aaKnown RBP6.2□□□□□ -1.42
HMGB1P31-201ENST00000437242 UPK3BL1B0FP48 263 aa6.19□□□□□ -1.42
HMGB1P31-201ENST00000437242 PATL2C9JE40 543 aaKnown RBP6.19□□□□□ -1.42
HMGB1P31-201ENST00000437242 UPK3BL2E5RIL1 263 aa6.19□□□□□ -1.42
HMGB1P31-201ENST00000437242 PSMD2Q13200 908 aa6.19□□□□□ -1.42
HMGB1P31-201ENST00000437242 PHC3Q8NDX5 983 aa6.19□□□□□ -1.42
HMGB1P31-201ENST00000437242 SP110Q9HB58 689 aa6.19□□□□□ -1.42
HMGB1P31-201ENST00000437242 CWC22Q9HCG8 908 aaKnown RBP6.19□□□□□ -1.42
HMGB1P31-201ENST00000437242 NCANO14594 1321 aa6.19□□□□□ -1.42
HMGB1P31-201ENST00000437242 B8ZZF3 427 aa6.18□□□□□ -1.42
HMGB1P31-201ENST00000437242 ST13P50502 369 aaKnown RBP6.18□□□□□ -1.42
HMGB1P31-201ENST00000437242 CHRNEQ04844 493 aa6.18□□□□□ -1.42
HMGB1P31-201ENST00000437242 DUSP4Q13115 394 aa6.18□□□□□ -1.42
HMGB1P31-201ENST00000437242 NR0B2Q15466 257 aa6.18□□□□□ -1.42
HMGB1P31-201ENST00000437242 TAF1CQ15572 869 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P31-201ENST00000437242 TIGD5Q53EQ6 642 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms