RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 CERS5Q8N5B7 392 aa10.73□□□□□ -0.69
NIF3L1-208ENST00000436412 PI4KAP1Q8N8J0 262 aa10.73□□□□□ -0.69
NIF3L1-208ENST00000436412 PCDHB9Q9Y5E1 797 aa10.73□□□□□ -0.69
NIF3L1-208ENST00000436412 MYBBP1AQ9BQG0 1328 aaKnown RBP10.73□□□□□ -0.69
NIF3L1-208ENST00000436412 NEURL1BA8MQ27 555 aa10.72□□□□□ -0.69
NIF3L1-208ENST00000436412 IL1R1P14778 569 aa10.72□□□□□ -0.69
NIF3L1-208ENST00000436412 KLRK1P26718 216 aa10.72□□□□□ -0.69
NIF3L1-208ENST00000436412 CHRNDQ07001 517 aa10.72□□□□□ -0.69
NIF3L1-208ENST00000436412 RASA3Q14644 834 aa10.72□□□□□ -0.69
NIF3L1-208ENST00000436412 TAF1CQ15572 869 aaPredicted RBP10.72□□□□□ -0.69
NIF3L1-208ENST00000436412 UBE3BQ7Z3V4 1068 aa10.72□□□□□ -0.69
NIF3L1-208ENST00000436412 ZNF804AQ7Z570 1209 aa10.72□□□□□ -0.69
NIF3L1-208ENST00000436412 C8orf58Q8NAV2 365 aa10.72□□□□□ -0.69
NIF3L1-208ENST00000436412 PRMT6Q96LA8 375 aaPredicted RBP10.72□□□□□ -0.69
NIF3L1-208ENST00000436412 VEZTQ9HBM0 779 aa10.72□□□□□ -0.69
NIF3L1-208ENST00000436412 ADAMTS8Q9UP79 889 aa10.72□□□□□ -0.69
NIF3L1-208ENST00000436412 SPEF2Q9C093 1822 aa10.72□□□□□ -0.69
NIF3L1-208ENST00000436412 CLRN2A0PK11 232 aa10.71□□□□□ -0.69
NIF3L1-208ENST00000436412 SLC35F4A4IF30 521 aa10.71□□□□□ -0.69
NIF3L1-208ENST00000436412 H0YGN5 161 aa10.71□□□□□ -0.69
NIF3L1-208ENST00000436412 CSF1RP07333 972 aa10.71□□□□□ -0.69
NIF3L1-208ENST00000436412 PTGIRP43119 386 aa10.71□□□□□ -0.69
NIF3L1-208ENST00000436412 PRMT2P55345 433 aa10.71□□□□□ -0.69
NIF3L1-208ENST00000436412 CAP1Q01518 475 aa10.71□□□□□ -0.69
NIF3L1-208ENST00000436412 NR1H3Q13133 447 aa10.71□□□□□ -0.69
NIF3L1-208ENST00000436412 KIF22Q14807 665 aa10.71□□□□□ -0.69
NIF3L1-208ENST00000436412 FOXD4L5Q5VV16 416 aaPredicted RBP10.71□□□□□ -0.69
NIF3L1-208ENST00000436412 GPR161Q8N6U8 529 aaKnown RBP10.71□□□□□ -0.69
NIF3L1-208ENST00000436412 ZSCAN1Q8NBB4 408 aa10.71□□□□□ -0.69
NIF3L1-208ENST00000436412 RNF217Q8TC41 542 aa10.71□□□□□ -0.69
NIF3L1-208ENST00000436412 OPTNQ96CV9 577 aa10.71□□□□□ -0.69
NIF3L1-208ENST00000436412 STK31Q9BXU1 1019 aa10.71□□□□□ -0.69
NIF3L1-208ENST00000436412 ZCCHC17Q9NP64 241 aaKnown RBP10.71□□□□□ -0.69
NIF3L1-208ENST00000436412 PTCH2Q9Y6C5 1203 aa10.71□□□□□ -0.69
NIF3L1-208ENST00000436412 IRS2Q9Y4H2 1338 aa10.7□□□□□ -0.7
NIF3L1-208ENST00000436412 CCL15-CCL14A0A0B4J2E2 113 aa10.7□□□□□ -0.7
NIF3L1-208ENST00000436412 RBM5P52756 815 aaKnown RBP eCLIP10.7□□□□□ -0.7
NIF3L1-208ENST00000436412 GCKRQ14397 625 aa10.7□□□□□ -0.7
NIF3L1-208ENST00000436412 CCL15Q16663 113 aa10.7□□□□□ -0.7
NIF3L1-208ENST00000436412 CWF19L2Q2TBE0 894 aaKnown RBP10.7□□□□□ -0.7
NIF3L1-208ENST00000436412 BRI3BPQ8WY22 251 aa10.7□□□□□ -0.7
NIF3L1-208ENST00000436412 MYH16Q9H6N6 1097 aa10.7□□□□□ -0.7
NIF3L1-208ENST00000436412 ELP3Q9H9T3 547 aa10.7□□□□□ -0.7
NIF3L1-208ENST00000436412 CYLDQ9NQC7 956 aa10.7□□□□□ -0.7
NIF3L1-208ENST00000436412 ANKRD18BA2A2Z9 1011 aa10.69□□□□□ -0.7
NIF3L1-208ENST00000436412 F8W031 263 aaPredicted RBP10.69□□□□□ -0.7
NIF3L1-208ENST00000436412 TLR2O60603 784 aa10.69□□□□□ -0.7
NIF3L1-208ENST00000436412 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.69□□□□□ -0.7
NIF3L1-208ENST00000436412 CCDC155Q8N6L0 562 aa10.69□□□□□ -0.7
NIF3L1-208ENST00000436412 ZNF70Q9UC06 446 aaPredicted RBP10.69□□□□□ -0.7
NIF3L1-208ENST00000436412 SERPINA10Q9UK55 444 aa10.69□□□□□ -0.7
NIF3L1-208ENST00000436412 PCDHAC2Q9Y5I4 1007 aa10.69□□□□□ -0.7
NIF3L1-208ENST00000436412 CSADQ9Y600 493 aa10.69□□□□□ -0.7
NIF3L1-208ENST00000436412 NDUFB9Q9Y6M9 179 aa10.69□□□□□ -0.7
NIF3L1-208ENST00000436412 FAM205AQ6ZU69 1335 aa10.68□□□□□ -0.7
NIF3L1-208ENST00000436412 CETPP11597 493 aa10.68□□□□□ -0.7
NIF3L1-208ENST00000436412 CASP7P55210 303 aa10.68□□□□□ -0.7
NIF3L1-208ENST00000436412 LACTBP83111 547 aaPredicted RBP10.68□□□□□ -0.7
NIF3L1-208ENST00000436412 KRT76Q01546 638 aa10.68□□□□□ -0.7
NIF3L1-208ENST00000436412 FAM43AQ8N2R8 423 aa10.68□□□□□ -0.7
NIF3L1-208ENST00000436412 POLMQ9NP87 494 aaPredicted RBP10.68□□□□□ -0.7
NIF3L1-208ENST00000436412 APAF1O14727 1248 aa10.67□□□□□ -0.7
NIF3L1-208ENST00000436412 TAF5LO75529 589 aa10.67□□□□□ -0.7
NIF3L1-208ENST00000436412 TNNI2P48788 182 aa10.67□□□□□ -0.7
NIF3L1-208ENST00000436412 IFIT5Q13325 482 aaKnown RBP10.67□□□□□ -0.7
NIF3L1-208ENST00000436412 VGLL4Q14135 290 aa10.67□□□□□ -0.7
NIF3L1-208ENST00000436412 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.67□□□□□ -0.7
NIF3L1-208ENST00000436412 NANOS1Q8WY41 292 aaKnown RBP10.67□□□□□ -0.7
NIF3L1-208ENST00000436412 DPF3Q92784 378 aa10.67□□□□□ -0.7
NIF3L1-208ENST00000436412 TEPSINQ96N21 525 aa10.67□□□□□ -0.7
NIF3L1-208ENST00000436412 HTATIP2Q9BUP3 242 aa10.67□□□□□ -0.7
NIF3L1-208ENST00000436412 OTOFQ9HC10 1997 aa10.66□□□□□ -0.7
NIF3L1-208ENST00000436412 TTC28Q96AY4 2481 aa10.66□□□□□ -0.7
NIF3L1-208ENST00000436412 AOX1Q06278 1338 aa10.66□□□□□ -0.7
NIF3L1-208ENST00000436412 SNAP23O00161 211 aa10.66□□□□□ -0.7
NIF3L1-208ENST00000436412 CAPN2P17655 700 aa10.66□□□□□ -0.7
NIF3L1-208ENST00000436412 HOXD10P28358 340 aa10.66□□□□□ -0.7
NIF3L1-208ENST00000436412 SNAPC2Q13487 334 aa10.66□□□□□ -0.7
NIF3L1-208ENST00000436412 MFSD14BQ5SR56 506 aa10.66□□□□□ -0.7
NIF3L1-208ENST00000436412 ERO1BQ86YB8 467 aa10.66□□□□□ -0.7
NIF3L1-208ENST00000436412 DZIP1LQ8IYY4 767 aaKnown RBP10.66□□□□□ -0.7
NIF3L1-208ENST00000436412 TSPYL6Q8N831 410 aa10.66□□□□□ -0.7
NIF3L1-208ENST00000436412 LINS1Q8NG48 757 aa10.66□□□□□ -0.7
NIF3L1-208ENST00000436412 SH3TC2Q8TF17 1288 aa10.66□□□□□ -0.7
NIF3L1-208ENST00000436412 HOOK2Q96ED9 719 aa10.66□□□□□ -0.7
NIF3L1-208ENST00000436412 TTF2Q9UNY4 1162 aaKnown RBP10.66□□□□□ -0.7
NIF3L1-208ENST00000436412 NR2E3Q9Y5X4 410 aa10.66□□□□□ -0.7
NIF3L1-208ENST00000436412 CACNA1FO60840 1977 aa10.66□□□□□ -0.7
NIF3L1-208ENST00000436412 A0A1W2PPC1 479 aa10.65□□□□□ -0.7
NIF3L1-208ENST00000436412 DLL1O00548 723 aa10.65□□□□□ -0.7
NIF3L1-208ENST00000436412 MYCP01106 439 aaPredicted RBP10.65□□□□□ -0.7
NIF3L1-208ENST00000436412 ERVK-9P63128 1117 aa10.65□□□□□ -0.7
NIF3L1-208ENST00000436412 HDLBPQ00341 1268 aaKnown RBP10.65□□□□□ -0.7
NIF3L1-208ENST00000436412 SLC17A8Q8NDX2 589 aa10.65□□□□□ -0.7
NIF3L1-208ENST00000436412 TDRD7Q8NHU6 1098 aaKnown RBP10.65□□□□□ -0.7
NIF3L1-208ENST00000436412 DNAAF4Q8WXU2 420 aa10.65□□□□□ -0.7
NIF3L1-208ENST00000436412 ARHGAP39Q9C0H5 1083 aa10.65□□□□□ -0.7
NIF3L1-208ENST00000436412 TMEM39BQ9GZU3 492 aa10.65□□□□□ -0.7
NIF3L1-208ENST00000436412 TDRD3Q9H7E2 651 aaKnown RBP10.65□□□□□ -0.7
NIF3L1-208ENST00000436412 TCP10L2B9ZVM9 353 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms