RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 DDX23Q9BUQ8 820 aaKnown RBP24.91■■□□□ 1.58
TOP2B-204ENST00000435706 FBXO38Q6PIJ6 1188 aa24.91■■□□□ 1.58
TOP2B-204ENST00000435706 ANKRD42Q8N9B4 389 aa24.91■■□□□ 1.58
TOP2B-204ENST00000435706 RAB3IPQ96QF0 476 aaPredicted RBP24.91■■□□□ 1.58
TOP2B-204ENST00000435706 LRCH2Q5VUJ6 765 aa24.91■■□□□ 1.58
TOP2B-204ENST00000435706 CERS3Q8IU89 383 aa24.91■■□□□ 1.58
TOP2B-204ENST00000435706 A0A087WUV0 522 aaPredicted RBP24.9■■□□□ 1.58
TOP2B-204ENST00000435706 KRT5P13647 590 aa24.9■■□□□ 1.58
TOP2B-204ENST00000435706 LSG1Q9H089 658 aaKnown RBP24.9■■□□□ 1.58
TOP2B-204ENST00000435706 NLRC4Q9NPP4 1024 aa24.9■■□□□ 1.58
TOP2B-204ENST00000435706 FAM114A2Q9NRY5 505 aa24.9■■□□□ 1.58
TOP2B-204ENST00000435706 A0A1W2PQ27 194 aa24.9■■□□□ 1.58
TOP2B-204ENST00000435706 A0A1W2PQ64 194 aa24.9■■□□□ 1.58
TOP2B-204ENST00000435706 A0A1W2PQD8 194 aa24.9■■□□□ 1.58
TOP2B-204ENST00000435706 STX2P32856 288 aa24.9■■□□□ 1.58
TOP2B-204ENST00000435706 HSPA1LP34931 641 aa24.9■■□□□ 1.58
TOP2B-204ENST00000435706 MUM1Q2TAK8 710 aa24.9■■□□□ 1.58
TOP2B-204ENST00000435706 PARP2Q9UGN5 583 aa24.9■■□□□ 1.58
TOP2B-204ENST00000435706 CTDSPL2Q05D32 466 aa24.9■■□□□ 1.58
TOP2B-204ENST00000435706 TRIM68Q6AZZ1 485 aa24.9■■□□□ 1.58
TOP2B-204ENST00000435706 DYMQ7RTS9 669 aa24.9■■□□□ 1.58
TOP2B-204ENST00000435706 SLC35F6Q8N357 371 aa24.9■■□□□ 1.58
TOP2B-204ENST00000435706 GBP5Q96PP8 586 aa24.9■■□□□ 1.58
TOP2B-204ENST00000435706 ABCC2Q92887 1545 aa24.9■■□□□ 1.58
TOP2B-204ENST00000435706 HNRNPH2P55795 449 aaKnown RBP24.9■■□□□ 1.58
TOP2B-204ENST00000435706 SPATA1Q5VX52 437 aa24.9■■□□□ 1.58
TOP2B-204ENST00000435706 NOSTRINQ8IVI9 506 aa24.9■■□□□ 1.58
TOP2B-204ENST00000435706 MSANTD4Q8NCY6 345 aa24.89■■□□□ 1.58
TOP2B-204ENST00000435706 KLHL14Q9P2G3 628 aa24.89■■□□□ 1.58
TOP2B-204ENST00000435706 DNMT1P26358 1616 aaKnown RBP24.89■■□□□ 1.58
TOP2B-204ENST00000435706 LAMC3Q9Y6N6 1575 aa24.89■■□□□ 1.58
TOP2B-204ENST00000435706 PAXIP1Q6ZW49 1069 aaPredicted RBP24.89■■□□□ 1.58
TOP2B-204ENST00000435706 EDC3Q96F86 508 aaKnown RBP24.89■■□□□ 1.58
TOP2B-204ENST00000435706 EFCC1Q9HA90 598 aa24.89■■□□□ 1.58
TOP2B-204ENST00000435706 LRWD1Q9UFC0 647 aa24.89■■□□□ 1.58
TOP2B-204ENST00000435706 KRT15P19012 456 aa24.89■■□□□ 1.57
TOP2B-204ENST00000435706 ARL1P40616 181 aaPredicted RBP24.89■■□□□ 1.57
TOP2B-204ENST00000435706 TCHPQ9BT92 498 aa24.89■■□□□ 1.57
TOP2B-204ENST00000435706 EPN1Q9Y6I3 576 aaPredicted RBP24.89■■□□□ 1.57
TOP2B-204ENST00000435706 SEPT14Q6ZU15 432 aa24.89■■□□□ 1.57
TOP2B-204ENST00000435706 PLBD2Q8NHP8 589 aa24.89■■□□□ 1.57
TOP2B-204ENST00000435706 NSFL1CQ9UNZ2 370 aaKnown RBP24.89■■□□□ 1.57
TOP2B-204ENST00000435706 DNM2P50570 870 aa24.88■■□□□ 1.57
TOP2B-204ENST00000435706 HOMER3Q9NSC5 361 aa24.88■■□□□ 1.57
TOP2B-204ENST00000435706 NIP7Q9Y221 180 aaKnown RBP eCLIP24.88■■□□□ 1.57
TOP2B-204ENST00000435706 CLIC4Q9Y696 253 aa24.88■■□□□ 1.57
TOP2B-204ENST00000435706 CABP7Q86V35 215 aa24.88■■□□□ 1.57
TOP2B-204ENST00000435706 RASEFQ8IZ41 740 aa24.88■■□□□ 1.57
TOP2B-204ENST00000435706 JRKLQ9Y4A0 524 aa24.88■■□□□ 1.57
TOP2B-204ENST00000435706 CCDC151A5D8V7 595 aa24.88■■□□□ 1.57
TOP2B-204ENST00000435706 KCNK3O14649 394 aa24.88■■□□□ 1.57
TOP2B-204ENST00000435706 VEZTQ9HBM0 779 aa24.88■■□□□ 1.57
TOP2B-204ENST00000435706 CLTAP09496 248 aa24.88■■□□□ 1.57
TOP2B-204ENST00000435706 VPS54Q9P1Q0 977 aa24.88■■□□□ 1.57
TOP2B-204ENST00000435706 AGTPBP1Q9UPW5 1226 aa24.88■■□□□ 1.57
TOP2B-204ENST00000435706 CASQ2O14958 399 aaPredicted RBP24.87■■□□□ 1.57
TOP2B-204ENST00000435706 PEX19P40855 299 aa24.87■■□□□ 1.57
TOP2B-204ENST00000435706 GOLGA8FQ08AF8 430 aa24.87■■□□□ 1.57
TOP2B-204ENST00000435706 GOLGA8DPQ0D2H9 430 aa24.87■■□□□ 1.57
TOP2B-204ENST00000435706 AP1ARQ63HQ0 302 aa24.87■■□□□ 1.57
TOP2B-204ENST00000435706 SNX29Q8TEQ0 813 aa24.87■■□□□ 1.57
TOP2B-204ENST00000435706 ZNF594Q96JF6 807 aaPredicted RBP24.87■■□□□ 1.57
TOP2B-204ENST00000435706 MAK16Q9BXY0 300 aaKnown RBP24.87■■□□□ 1.57
TOP2B-204ENST00000435706 PARD6BQ9BYG5 372 aa24.87■■□□□ 1.57
TOP2B-204ENST00000435706 MRPL12P52815 198 aaKnown RBP24.87■■□□□ 1.57
TOP2B-204ENST00000435706 NCBP1Q09161 790 aaKnown RBP24.87■■□□□ 1.57
TOP2B-204ENST00000435706 KCTD16Q68DU8 428 aa24.87■■□□□ 1.57
TOP2B-204ENST00000435706 ANKRD20A3Q5VUR7 823 aa24.87■■□□□ 1.57
TOP2B-204ENST00000435706 HAUS3Q68CZ6 603 aa24.87■■□□□ 1.57
TOP2B-204ENST00000435706 SDCCAG8Q86SQ7 713 aaPredicted RBP24.87■■□□□ 1.57
TOP2B-204ENST00000435706 PTPRTO14522 1441 aa24.87■■□□□ 1.57
TOP2B-204ENST00000435706 TXNDC9O14530 226 aa24.86■■□□□ 1.57
TOP2B-204ENST00000435706 ZNF853P0CG23 659 aa24.86■■□□□ 1.57
TOP2B-204ENST00000435706 PLCG2P16885 1265 aa24.86■■□□□ 1.57
TOP2B-204ENST00000435706 HERC4Q5GLZ8 1057 aaPredicted RBP24.86■■□□□ 1.57
TOP2B-204ENST00000435706 RPUSD2Q8IZ73 545 aaKnown RBP24.86■■□□□ 1.57
TOP2B-204ENST00000435706 NLRP3Q96P20 1036 aa24.86■■□□□ 1.57
TOP2B-204ENST00000435706 USP44Q9H0E7 712 aa24.86■■□□□ 1.57
TOP2B-204ENST00000435706 AMFRQ9UKV5 643 aa24.86■■□□□ 1.57
TOP2B-204ENST00000435706 KRIT1O00522 736 aa24.86■■□□□ 1.57
TOP2B-204ENST00000435706 PRDM1O75626 825 aa24.86■■□□□ 1.57
TOP2B-204ENST00000435706 NONOQ15233 471 aaKnown RBP eCLIP24.86■■□□□ 1.572e-7■■■□□ 16
TOP2B-204ENST00000435706 DPCR1Q3MIW9 517 aa24.86■■□□□ 1.57
TOP2B-204ENST00000435706 DZIP3Q86Y13 1208 aaKnown RBP24.86■■□□□ 1.57
TOP2B-204ENST00000435706 CEP120Q8N960 986 aa24.86■■□□□ 1.57
TOP2B-204ENST00000435706 RTEL1Q9NZ71 1219 aa24.86■■□□□ 1.57
TOP2B-204ENST00000435706 FAM184BQ9ULE4 1060 aa24.86■■□□□ 1.57
TOP2B-204ENST00000435706 NDC80O14777 642 aa24.86■■□□□ 1.57
TOP2B-204ENST00000435706 CCDC14Q49A88 953 aa24.86■■□□□ 1.57
TOP2B-204ENST00000435706 WDR78Q5VTH9 848 aa24.86■■□□□ 1.57
TOP2B-204ENST00000435706 ZNF804AQ7Z570 1209 aa24.86■■□□□ 1.57
TOP2B-204ENST00000435706 ADCK5Q3MIX3 580 aa24.86■■□□□ 1.57
TOP2B-204ENST00000435706 CLIC6Q96NY7 704 aa24.86■■□□□ 1.57
TOP2B-204ENST00000435706 F8W031 263 aaPredicted RBP24.85■■□□□ 1.57
TOP2B-204ENST00000435706 IKBKBO14920 756 aa24.85■■□□□ 1.57
TOP2B-204ENST00000435706 BUB1O43683 1085 aa24.85■■□□□ 1.57
TOP2B-204ENST00000435706 PNMA6AP0CW24 399 aaPredicted RBP24.85■■□□□ 1.57
TOP2B-204ENST00000435706 TBC1D31Q96DN5 1066 aa24.85■■□□□ 1.57
TOP2B-204ENST00000435706 DCAF5Q96JK2 942 aa24.85■■□□□ 1.57
TOP2B-204ENST00000435706 MYO1AQ9UBC5 1043 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms