RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 IFNL3Q8IZI9 196 aa19.42■□□□□ 0.7
SMPD4-207ENST00000435455 KIAA1683Q9H0B3 1180 aa19.42■□□□□ 0.7
SMPD4-207ENST00000435455 NAPBQ9H115 298 aa19.42■□□□□ 0.7
SMPD4-207ENST00000435455 SMIM22K7EJ46 135 aa19.41■□□□□ 0.7
SMPD4-207ENST00000435455 GNRH1P01148 92 aa19.41■□□□□ 0.7
SMPD4-207ENST00000435455 GCLCP48506 637 aaPredicted RBP19.41■□□□□ 0.7
SMPD4-207ENST00000435455 IRX3P78415 501 aaPredicted RBP19.41■□□□□ 0.7
SMPD4-207ENST00000435455 CCDC129Q6ZRS4 1044 aa19.41■□□□□ 0.7
SMPD4-207ENST00000435455 C12orf42Q96LP6 360 aa19.41■□□□□ 0.7
SMPD4-207ENST00000435455 ASCC2Q9H1I8 757 aaPredicted RBP19.41■□□□□ 0.7
SMPD4-207ENST00000435455 MKNK2Q9HBH9 465 aa19.41■□□□□ 0.7
SMPD4-207ENST00000435455 ZNF287Q9HBT7 754 aa19.41■□□□□ 0.7
SMPD4-207ENST00000435455 EMILIN3Q9NT22 766 aa19.41■□□□□ 0.7
SMPD4-207ENST00000435455 AKR1B1P15121 316 aa19.4■□□□□ 0.7
SMPD4-207ENST00000435455 PDE4AP27815 886 aa19.4■□□□□ 0.7
SMPD4-207ENST00000435455 ZYXQ15942 572 aaKnown RBP19.4■□□□□ 0.7
SMPD4-207ENST00000435455 MCMDC2Q4G0Z9 681 aa19.4■□□□□ 0.7
SMPD4-207ENST00000435455 ACER1Q8TDN7 264 aa19.4■□□□□ 0.7
SMPD4-207ENST00000435455 FAM227BQ96M60 508 aa19.4■□□□□ 0.7
SMPD4-207ENST00000435455 HPS5Q9UPZ3 1129 aa19.4■□□□□ 0.7
SMPD4-207ENST00000435455 ZSWIM8A7E2V4 1837 aa19.39■□□□□ 0.7
SMPD4-207ENST00000435455 MGAMO43451 1857 aa19.39■□□□□ 0.7
SMPD4-207ENST00000435455 A0A0D9SFI3 127 aa19.39■□□□□ 0.69
SMPD4-207ENST00000435455 CCDC85CA6NKD9 419 aa19.39■□□□□ 0.69
SMPD4-207ENST00000435455 HIP1O00291 1037 aa19.39■□□□□ 0.69
SMPD4-207ENST00000435455 SLC3A2P08195 630 aaKnown RBP19.39■□□□□ 0.69
SMPD4-207ENST00000435455 SDSP20132 328 aa19.39■□□□□ 0.69
SMPD4-207ENST00000435455 MFAP1P55081 439 aaKnown RBP19.39■□□□□ 0.69
SMPD4-207ENST00000435455 CAP1Q01518 475 aa19.39■□□□□ 0.69
SMPD4-207ENST00000435455 NMIQ13287 307 aaPredicted RBP19.39■□□□□ 0.69
SMPD4-207ENST00000435455 SH2D4AQ9H788 454 aa19.39■□□□□ 0.69
SMPD4-207ENST00000435455 ARHGEF10LQ9HCE6 1279 aa19.39■□□□□ 0.69
SMPD4-207ENST00000435455 PTPN22Q9Y2R2 807 aa19.39■□□□□ 0.69
SMPD4-207ENST00000435455 PSMC4P43686 418 aa19.38■□□□□ 0.69
SMPD4-207ENST00000435455 PRMT2P55345 433 aa19.38■□□□□ 0.69
SMPD4-207ENST00000435455 ICA1Q05084 483 aa19.38■□□□□ 0.69
SMPD4-207ENST00000435455 ALX1Q15699 326 aa19.38■□□□□ 0.69
SMPD4-207ENST00000435455 FAM110CQ1W6H9 321 aa19.38■□□□□ 0.69
SMPD4-207ENST00000435455 ARHGAP39Q9C0H5 1083 aa19.38■□□□□ 0.69
SMPD4-207ENST00000435455 DIAPH3Q9NSV4 1193 aa19.38■□□□□ 0.69
SMPD4-207ENST00000435455 GREB1LQ9C091 1923 aaPredicted RBP19.37■□□□□ 0.69
SMPD4-207ENST00000435455 HTTP42858 3142 aa19.37■□□□□ 0.69
SMPD4-207ENST00000435455 USP17L15C9J2P7 530 aa19.37■□□□□ 0.69
SMPD4-207ENST00000435455 USP17L13C9JLJ4 530 aa19.37■□□□□ 0.69
SMPD4-207ENST00000435455 USP17L11C9JVI0 530 aa19.37■□□□□ 0.69
SMPD4-207ENST00000435455 USP17L18D6R9N7 530 aa19.37■□□□□ 0.69
SMPD4-207ENST00000435455 USP17L22D6RA61 530 aa19.37■□□□□ 0.69
SMPD4-207ENST00000435455 USP17L17D6RBQ6 530 aa19.37■□□□□ 0.69
SMPD4-207ENST00000435455 USP17L19D6RCP7 530 aa19.37■□□□□ 0.69
SMPD4-207ENST00000435455 USP17L20D6RJB6 530 aa19.37■□□□□ 0.69
SMPD4-207ENST00000435455 FMNL1O95466 1100 aaPredicted RBP19.37■□□□□ 0.69
SMPD4-207ENST00000435455 RASA1P20936 1047 aa19.37■□□□□ 0.69
SMPD4-207ENST00000435455 HOXD10P28358 340 aa19.37■□□□□ 0.69
SMPD4-207ENST00000435455 PDE4BQ07343 736 aa19.37■□□□□ 0.69
SMPD4-207ENST00000435455 USP17L24Q0WX57 530 aa19.37■□□□□ 0.69
SMPD4-207ENST00000435455 TTC22Q5TAA0 569 aa19.37■□□□□ 0.69
SMPD4-207ENST00000435455 GTF3C2Q8WUA4 911 aaPredicted RBP19.37■□□□□ 0.69
SMPD4-207ENST00000435455 TRIM47Q96LD4 638 aa19.37■□□□□ 0.69
SMPD4-207ENST00000435455 KANSL2Q9H9L4 492 aa19.37■□□□□ 0.69
SMPD4-207ENST00000435455 CCDC171Q6TFL3 1326 aa19.36■□□□□ 0.69
SMPD4-207ENST00000435455 A0A1W2PRG0 241 aa19.36■□□□□ 0.69
SMPD4-207ENST00000435455 FOXP2O15409 715 aa19.36■□□□□ 0.69
SMPD4-207ENST00000435455 VCAM1P19320 739 aa19.36■□□□□ 0.69
SMPD4-207ENST00000435455 FCGRTP55899 365 aa19.36■□□□□ 0.69
SMPD4-207ENST00000435455 HERVK_113P62684 666 aa19.36■□□□□ 0.69
SMPD4-207ENST00000435455 PPARAQ07869 468 aa19.36■□□□□ 0.69
SMPD4-207ENST00000435455 STK11IPQ8N1F8 1099 aa19.36■□□□□ 0.69
SMPD4-207ENST00000435455 ANKRD13CQ8N6S4 541 aa19.36■□□□□ 0.69
SMPD4-207ENST00000435455 P2RX7Q99572 595 aaKnown RBP19.36■□□□□ 0.69
SMPD4-207ENST00000435455 VPS53Q5VIR6 699 aa19.35■□□□□ 0.69
SMPD4-207ENST00000435455 ZNF444Q8N0Y2 327 aaPredicted RBP19.35■□□□□ 0.69
SMPD4-207ENST00000435455 MORF4L1Q9UBU8 362 aa19.35■□□□□ 0.69
SMPD4-207ENST00000435455 SRRDQ9UH36 339 aa19.35■□□□□ 0.69
SMPD4-207ENST00000435455 TMX2Q9Y320 296 aa19.35■□□□□ 0.69
SMPD4-207ENST00000435455 ZMYM6O95789 1325 aa19.34■□□□□ 0.69
SMPD4-207ENST00000435455 CTGFP29279 349 aa19.34■□□□□ 0.69
SMPD4-207ENST00000435455 CATSPERGQ6ZRH7 1159 aa19.34■□□□□ 0.69
SMPD4-207ENST00000435455 CENPQQ7L2Z9 268 aaPredicted RBP19.34■□□□□ 0.69
SMPD4-207ENST00000435455 ZNF589Q86UQ0 364 aaPredicted RBP19.34■□□□□ 0.69
SMPD4-207ENST00000435455 CLEC10AQ8IUN9 316 aa19.34■□□□□ 0.69
SMPD4-207ENST00000435455 SIAH1Q8IUQ4 282 aa19.34■□□□□ 0.69
SMPD4-207ENST00000435455 LPAR1Q92633 364 aa19.34■□□□□ 0.69
SMPD4-207ENST00000435455 PRDM1O75626 825 aa19.33■□□□□ 0.68
SMPD4-207ENST00000435455 ECM2O94769 699 aaPredicted RBP19.33■□□□□ 0.68
SMPD4-207ENST00000435455 HSPD1P10809 573 aaKnown RBP19.33■□□□□ 0.68
SMPD4-207ENST00000435455 EEF2P13639 858 aaKnown RBP19.33■□□□□ 0.68
SMPD4-207ENST00000435455 ATP2B2Q01814 1243 aa19.33■□□□□ 0.68
SMPD4-207ENST00000435455 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.33■□□□□ 0.68
SMPD4-207ENST00000435455 RPAP3Q9H6T3 665 aaPredicted RBP19.33■□□□□ 0.68
SMPD4-207ENST00000435455 VCPKMTQ9H867 229 aa19.33■□□□□ 0.68
SMPD4-207ENST00000435455 ANAPC4Q9UJX5 808 aa19.33■□□□□ 0.68
SMPD4-207ENST00000435455 PTCH2Q9Y6C5 1203 aa19.33■□□□□ 0.68
SMPD4-207ENST00000435455 MYH4Q9Y623 1939 aa19.32■□□□□ 0.68
SMPD4-207ENST00000435455 FGAP02671 866 aa19.32■□□□□ 0.68
SMPD4-207ENST00000435455 GSPT1P15170 499 aaKnown RBP19.32■□□□□ 0.68
SMPD4-207ENST00000435455 CWC27Q6UX04 472 aaKnown RBP19.32■□□□□ 0.68
SMPD4-207ENST00000435455 GOPCQ9HD26 462 aa19.32■□□□□ 0.68
SMPD4-207ENST00000435455 NYAP2Q9P242 653 aa19.32■□□□□ 0.68
SMPD4-207ENST00000435455 DOCK3Q8IZD9 2030 aa19.32■□□□□ 0.68
SMPD4-207ENST00000435455 PLIN4Q96Q06 1357 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms