RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 OXER1Q8TDS5 423 aa19.28■□□□□ 0.68
USHBP1-203ENST00000431146 FUCA2Q9BTY2 467 aa19.28■□□□□ 0.68
USHBP1-203ENST00000431146 STX8Q9UNK0 236 aa19.28■□□□□ 0.68
USHBP1-203ENST00000431146 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.28■□□□□ 0.68
USHBP1-203ENST00000431146 SPTLC2O15270 562 aa19.28■□□□□ 0.68
USHBP1-203ENST00000431146 CNTNAP5Q8WYK1 1306 aa19.28■□□□□ 0.68
USHBP1-203ENST00000431146 TEKT1Q969V4 418 aa19.28■□□□□ 0.68
USHBP1-203ENST00000431146 CLSTN2Q9H4D0 955 aa19.28■□□□□ 0.68
USHBP1-203ENST00000431146 DDX19AQ9NUU7 478 aaKnown RBP19.28■□□□□ 0.68
USHBP1-203ENST00000431146 YEATS4O95619 227 aa19.27■□□□□ 0.68
USHBP1-203ENST00000431146 MARCKSP29966 332 aaPredicted RBP19.27■□□□□ 0.68
USHBP1-203ENST00000431146 MAP3K11Q16584 847 aa19.27■□□□□ 0.68
USHBP1-203ENST00000431146 CDC42EP5Q6NZY7 148 aa19.27■□□□□ 0.68
USHBP1-203ENST00000431146 DGKHQ86XP1 1220 aa19.27■□□□□ 0.68
USHBP1-203ENST00000431146 NOSTRINQ8IVI9 506 aa19.27■□□□□ 0.68
USHBP1-203ENST00000431146 FSIP1Q8NA03 581 aa19.27■□□□□ 0.68
USHBP1-203ENST00000431146 PRPF3O43395 683 aaKnown RBP19.27■□□□□ 0.67
USHBP1-203ENST00000431146 SAFBQ15424 915 aaKnown RBP eCLIP19.27■□□□□ 0.67
USHBP1-203ENST00000431146 APOBEC3HQ6NTF7 200 aaKnown RBP19.27■□□□□ 0.67
USHBP1-203ENST00000431146 RASGRP2Q7LDG7 609 aa19.27■□□□□ 0.67
USHBP1-203ENST00000431146 KCNG4Q8TDN1 519 aa19.27■□□□□ 0.67
USHBP1-203ENST00000431146 ZNF646O15015 1829 aaPredicted RBP19.26■□□□□ 0.67
USHBP1-203ENST00000431146 A0A1B0GVL5 298 aa19.26■□□□□ 0.67
USHBP1-203ENST00000431146 CRKP46108 304 aa19.26■□□□□ 0.67
USHBP1-203ENST00000431146 SNW1Q13573 536 aaKnown RBP19.26■□□□□ 0.67
USHBP1-203ENST00000431146 DACT2Q5SW24 774 aa19.26■□□□□ 0.67
USHBP1-203ENST00000431146 STAG2Q8N3U4 1231 aa19.26■□□□□ 0.67
USHBP1-203ENST00000431146 RTN4Q9NQC3 1192 aaKnown RBP19.26■□□□□ 0.67
USHBP1-203ENST00000431146 UTRNP46939 3433 aa19.26■□□□□ 0.67
USHBP1-203ENST00000431146 C10orf71Q711Q0 1435 aa19.26■□□□□ 0.67
USHBP1-203ENST00000431146 VEGFAP15692 232 aaPredicted RBP19.25■□□□□ 0.67
USHBP1-203ENST00000431146 CACNB3P54284 484 aa19.25■□□□□ 0.67
USHBP1-203ENST00000431146 NFIAQ12857 509 aa19.25■□□□□ 0.67
USHBP1-203ENST00000431146 STRIP1Q5VSL9 837 aa19.25■□□□□ 0.67
USHBP1-203ENST00000431146 CCDC73Q6ZRK6 1079 aa19.25■□□□□ 0.67
USHBP1-203ENST00000431146 ANP32BQ92688 251 aaKnown RBP19.25■□□□□ 0.67
USHBP1-203ENST00000431146 ZNF287Q9HBT7 754 aa19.25■□□□□ 0.67
USHBP1-203ENST00000431146 MYH8P13535 1937 aa19.25■□□□□ 0.67
USHBP1-203ENST00000431146 SLURP2P0DP57 97 aa19.25■□□□□ 0.67
USHBP1-203ENST00000431146 RBM5P52756 815 aaKnown RBP eCLIP19.25■□□□□ 0.67
USHBP1-203ENST00000431146 ADALQ6DHV7 355 aa19.25■□□□□ 0.67
USHBP1-203ENST00000431146 HHIPL2Q6UWX4 724 aa19.25■□□□□ 0.67
USHBP1-203ENST00000431146 MAP3K14Q99558 947 aa19.25■□□□□ 0.67
USHBP1-203ENST00000431146 TMEM47Q9BQJ4 181 aa19.25■□□□□ 0.67
USHBP1-203ENST00000431146 PPIP5K2O43314 1243 aa19.24■□□□□ 0.67
USHBP1-203ENST00000431146 SLC39A14Q15043 492 aa19.24■□□□□ 0.67
USHBP1-203ENST00000431146 MRPS27Q92552 414 aaKnown RBP19.24■□□□□ 0.67
USHBP1-203ENST00000431146 TCP11L1Q9NUJ3 509 aa19.24■□□□□ 0.67
USHBP1-203ENST00000431146 DPEP1P16444 411 aa19.24■□□□□ 0.67
USHBP1-203ENST00000431146 TOB1P50616 345 aaPredicted RBP19.24■□□□□ 0.67
USHBP1-203ENST00000431146 KIAA2012Q0VF49 1180 aa19.24■□□□□ 0.67
USHBP1-203ENST00000431146 ENGASEQ8NFI3 743 aa19.24■□□□□ 0.67
USHBP1-203ENST00000431146 ANKS1AQ92625 1134 aa19.24■□□□□ 0.67
USHBP1-203ENST00000431146 ZMYND15Q9H091 742 aa19.24■□□□□ 0.67
USHBP1-203ENST00000431146 FOXP1Q9H334 677 aaPredicted RBP19.24■□□□□ 0.67
USHBP1-203ENST00000431146 FAM205CA6NFA0 338 aa19.23■□□□□ 0.67
USHBP1-203ENST00000431146 YDJCA8MPS7 323 aa19.23■□□□□ 0.67
USHBP1-203ENST00000431146 NDUFA8P51970 172 aa19.23■□□□□ 0.67
USHBP1-203ENST00000431146 FAM160A1Q05DH4 1040 aa19.23■□□□□ 0.67
USHBP1-203ENST00000431146 PTPAQ15257 358 aa19.23■□□□□ 0.67
USHBP1-203ENST00000431146 ZFPM1Q8IX07 1006 aa19.23■□□□□ 0.67
USHBP1-203ENST00000431146 TTLL6Q8N841 843 aa19.23■□□□□ 0.67
USHBP1-203ENST00000431146 CEP95Q96GE4 821 aa19.23■□□□□ 0.67
USHBP1-203ENST00000431146 CCDC192P0DO97 292 aa19.22■□□□□ 0.67
USHBP1-203ENST00000431146 ATP2B1P20020 1258 aa19.22■□□□□ 0.67
USHBP1-203ENST00000431146 KIF5BP33176 963 aa19.22■□□□□ 0.67
USHBP1-203ENST00000431146 AXDND1Q5T1B0 1012 aaPredicted RBP19.22■□□□□ 0.67
USHBP1-203ENST00000431146 NEDD1Q8NHV4 660 aa19.22■□□□□ 0.67
USHBP1-203ENST00000431146 PHF20Q9BVI0 1012 aa19.22■□□□□ 0.67
USHBP1-203ENST00000431146 OSBPL5Q9H0X9 879 aaPredicted RBP19.22■□□□□ 0.67
USHBP1-203ENST00000431146 MAD2L2Q9UI95 211 aa19.22■□□□□ 0.67
USHBP1-203ENST00000431146 ZBTB7AO95365 584 aa19.22■□□□□ 0.67
USHBP1-203ENST00000431146 GOLGA8HP0CJ92 632 aa19.22■□□□□ 0.67
USHBP1-203ENST00000431146 XBP1P17861 261 aa19.22■□□□□ 0.67
USHBP1-203ENST00000431146 KCNA3P22001 575 aa19.22■□□□□ 0.67
USHBP1-203ENST00000431146 TYRO3Q06418 890 aa19.22■□□□□ 0.67
USHBP1-203ENST00000431146 CCDC173Q0VFZ6 552 aa19.22■□□□□ 0.67
USHBP1-203ENST00000431146 TCP10Q12799 353 aa19.22■□□□□ 0.67
USHBP1-203ENST00000431146 CCDC178Q5BJE1 867 aa19.22■□□□□ 0.67
USHBP1-203ENST00000431146 CABP5Q9NP86 173 aa19.22■□□□□ 0.67
USHBP1-203ENST00000431146 A0A1W2PQ27 194 aa19.21■□□□□ 0.67
USHBP1-203ENST00000431146 A0A1W2PQ64 194 aa19.21■□□□□ 0.67
USHBP1-203ENST00000431146 A0A1W2PQD8 194 aa19.21■□□□□ 0.67
USHBP1-203ENST00000431146 GABPAQ06546 454 aa19.21■□□□□ 0.67
USHBP1-203ENST00000431146 GRM4Q14833 912 aa19.21■□□□□ 0.67
USHBP1-203ENST00000431146 EARS2Q5JPH6 523 aaKnown RBP19.21■□□□□ 0.67
USHBP1-203ENST00000431146 RBM43Q6ZSC3 357 aaKnown RBP19.21■□□□□ 0.67
USHBP1-203ENST00000431146 CLEC10AQ8IUN9 316 aa19.21■□□□□ 0.67
USHBP1-203ENST00000431146 ERCC4Q92889 916 aaPredicted RBP19.21■□□□□ 0.67
USHBP1-203ENST00000431146 ZDHHC15Q96MV8 337 aa19.21■□□□□ 0.67
USHBP1-203ENST00000431146 CLIC6Q96NY7 704 aa19.21■□□□□ 0.67
USHBP1-203ENST00000431146 KINO60870 393 aaKnown RBP19.21■□□□□ 0.67
USHBP1-203ENST00000431146 NT5C2P49902 561 aa19.21■□□□□ 0.67
USHBP1-203ENST00000431146 SLC35G1Q2M3R5 365 aa19.21■□□□□ 0.67
USHBP1-203ENST00000431146 NOM1Q5C9Z4 860 aaKnown RBP19.21■□□□□ 0.67
USHBP1-203ENST00000431146 FMR1NBQ8N0W7 255 aaPredicted RBP19.21■□□□□ 0.67
USHBP1-203ENST00000431146 CPVLQ9H3G5 476 aa19.21■□□□□ 0.67
USHBP1-203ENST00000431146 MRVI1Q9Y6F6 885 aa19.21■□□□□ 0.67
USHBP1-203ENST00000431146 SCG2P13521 617 aa19.2■□□□□ 0.66
USHBP1-203ENST00000431146 AKR1B1P15121 316 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms