RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 ZRANB2O95218 330 aaKnown RBP eCLIP8.23□□□□□ -1.09
COL28A1-202ENST00000430711 ST5P78524 1137 aa8.23□□□□□ -1.09
COL28A1-202ENST00000430711 TRDNQ13061 729 aa8.23□□□□□ -1.09
COL28A1-202ENST00000430711 POSTNQ15063 836 aa8.23□□□□□ -1.09
COL28A1-202ENST00000430711 ZRSR1Q15695 479 aaKnown RBP8.23□□□□□ -1.09
COL28A1-202ENST00000430711 NPY5RQ15761 445 aa8.23□□□□□ -1.09
COL28A1-202ENST00000430711 PKN1Q16512 942 aa8.23□□□□□ -1.09
COL28A1-202ENST00000430711 DHX58Q96C10 678 aa8.23□□□□□ -1.09
COL28A1-202ENST00000430711 TRERF1Q96PN7 1200 aa8.23□□□□□ -1.09
COL28A1-202ENST00000430711 NAPBQ9H115 298 aa8.23□□□□□ -1.09
COL28A1-202ENST00000430711 SUGCTQ9HAC7 445 aa8.23□□□□□ -1.09
COL28A1-202ENST00000430711 JAG2Q9Y219 1238 aa8.23□□□□□ -1.09
COL28A1-202ENST00000430711 SLC12A7Q9Y666 1083 aa8.23□□□□□ -1.09
COL28A1-202ENST00000430711 TNS1Q9HBL0 1735 aaKnown RBP8.23□□□□□ -1.09
COL28A1-202ENST00000430711 PLCH1Q4KWH8 1693 aa8.23□□□□□ -1.09
COL28A1-202ENST00000430711 A0A0G2JS52 829 aa8.23□□□□□ -1.09
COL28A1-202ENST00000430711 DHX16O60231 1041 aaKnown RBP8.23□□□□□ -1.09
COL28A1-202ENST00000430711 TOP1P11387 765 aaKnown RBP8.23□□□□□ -1.09
COL28A1-202ENST00000430711 SARSP49591 514 aaKnown RBP8.23□□□□□ -1.09
COL28A1-202ENST00000430711 MMRN1Q13201 1228 aa8.23□□□□□ -1.09
COL28A1-202ENST00000430711 IL17AQ16552 155 aa8.23□□□□□ -1.09
COL28A1-202ENST00000430711 KRT222Q8N1A0 295 aa8.23□□□□□ -1.09
COL28A1-202ENST00000430711 KRI1Q8N9T8 703 aaKnown RBP8.23□□□□□ -1.09
COL28A1-202ENST00000430711 CCDC34Q96HJ3 373 aa8.23□□□□□ -1.09
COL28A1-202ENST00000430711 MTRQ99707 1265 aa8.23□□□□□ -1.09
COL28A1-202ENST00000430711 BLZF1Q9H2G9 400 aa8.23□□□□□ -1.09
COL28A1-202ENST00000430711 SLC4A4Q9Y6R1 1079 aa8.23□□□□□ -1.09
COL28A1-202ENST00000430711 CDHR2Q9BYE9 1310 aa8.22□□□□□ -1.09
COL28A1-202ENST00000430711 CASZ1Q86V15 1759 aa8.22□□□□□ -1.09
COL28A1-202ENST00000430711 MINDY4BA8MYZ0 360 aa8.22□□□□□ -1.09
COL28A1-202ENST00000430711 POLR3GO15318 223 aaPredicted RBP8.22□□□□□ -1.09
COL28A1-202ENST00000430711 CUTAO60888 179 aa8.22□□□□□ -1.09
COL28A1-202ENST00000430711 PTPREP23469 700 aa8.22□□□□□ -1.09
COL28A1-202ENST00000430711 GYG1P46976 350 aa8.22□□□□□ -1.09
COL28A1-202ENST00000430711 FXR2P51116 673 aaKnown RBP eCLIP8.22□□□□□ -1.09
COL28A1-202ENST00000430711 SSRP1Q08945 709 aaKnown RBP8.22□□□□□ -1.09
COL28A1-202ENST00000430711 MORC3Q14149 939 aa8.22□□□□□ -1.09
COL28A1-202ENST00000430711 AKNAD1Q5T1N1 836 aa8.22□□□□□ -1.09
COL28A1-202ENST00000430711 CCDC24Q8N4L8 307 aa8.22□□□□□ -1.09
COL28A1-202ENST00000430711 CRACR2BQ8N4Y2 399 aaPredicted RBP8.22□□□□□ -1.09
COL28A1-202ENST00000430711 TIGD1Q96MW7 591 aa8.22□□□□□ -1.09
COL28A1-202ENST00000430711 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.22□□□□□ -1.09
COL28A1-202ENST00000430711 LZTFL1Q9NQ48 299 aa8.22□□□□□ -1.09
COL28A1-202ENST00000430711 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.22□□□□□ -1.09
COL28A1-202ENST00000430711 BTG4Q9NY30 223 aa8.22□□□□□ -1.09
COL28A1-202ENST00000430711 CACNA1SQ13698 1873 aa8.22□□□□□ -1.09
COL28A1-202ENST00000430711 WDR19Q8NEZ3 1342 aa8.22□□□□□ -1.09
COL28A1-202ENST00000430711 PATL2C9JE40 543 aaKnown RBP8.21□□□□□ -1.09
COL28A1-202ENST00000430711 TBC1D8O95759 1140 aa8.21□□□□□ -1.09
COL28A1-202ENST00000430711 IFNAR1P17181 557 aa8.21□□□□□ -1.09
COL28A1-202ENST00000430711 FUT2Q10981 343 aa8.21□□□□□ -1.09
COL28A1-202ENST00000430711 RTN1Q16799 776 aa8.21□□□□□ -1.09
COL28A1-202ENST00000430711 DZIP3Q86Y13 1208 aaKnown RBP8.21□□□□□ -1.09
COL28A1-202ENST00000430711 NEK11Q8NG66 645 aa8.21□□□□□ -1.09
COL28A1-202ENST00000430711 LRRC15Q8TF66 581 aa8.21□□□□□ -1.09
COL28A1-202ENST00000430711 EEF2KMTQ96G04 330 aa8.21□□□□□ -1.09
COL28A1-202ENST00000430711 OTUD5Q96G74 571 aa8.21□□□□□ -1.09
COL28A1-202ENST00000430711 MAPK8IP1Q9UQF2 711 aa8.21□□□□□ -1.09
COL28A1-202ENST00000430711 DOT1LQ8TEK3 1739 aa8.21□□□□□ -1.09
COL28A1-202ENST00000430711 SOS2Q07890 1332 aaPredicted RBP8.21□□□□□ -1.1
COL28A1-202ENST00000430711 RREB1Q92766 1687 aa8.21□□□□□ -1.1
COL28A1-202ENST00000430711 H3BQF6 201 aa8.21□□□□□ -1.1
COL28A1-202ENST00000430711 CYP2D6P10635 497 aa8.21□□□□□ -1.1
COL28A1-202ENST00000430711 TDO2P48775 406 aa8.21□□□□□ -1.1
COL28A1-202ENST00000430711 FXR1P51114 621 aaKnown RBP eCLIP8.21□□□□□ -1.1
COL28A1-202ENST00000430711 EVA1CP58658 441 aa8.21□□□□□ -1.1
COL28A1-202ENST00000430711 GNG11P61952 73 aa8.21□□□□□ -1.1
COL28A1-202ENST00000430711 RBL2Q08999 1139 aa8.21□□□□□ -1.1
COL28A1-202ENST00000430711 PUM3Q15397 648 aaKnown RBP8.21□□□□□ -1.1
COL28A1-202ENST00000430711 SEC23AQ15436 765 aa8.21□□□□□ -1.1
COL28A1-202ENST00000430711 TEX35Q5T0J7 233 aa8.21□□□□□ -1.1
COL28A1-202ENST00000430711 WWC2Q6AWC2 1192 aa8.21□□□□□ -1.1
COL28A1-202ENST00000430711 GPIHBP1Q8IV16 184 aa8.21□□□□□ -1.1
COL28A1-202ENST00000430711 ZNF654Q8IZM8 581 aa8.21□□□□□ -1.1
COL28A1-202ENST00000430711 ACRBPQ8NEB7 543 aa8.21□□□□□ -1.1
COL28A1-202ENST00000430711 SYMPKQ92797 1274 aaKnown RBP8.21□□□□□ -1.1
COL28A1-202ENST00000430711 ACSBG1Q96GR2 724 aa8.21□□□□□ -1.1
COL28A1-202ENST00000430711 BAG1Q99933 345 aaPredicted RBP8.21□□□□□ -1.1
COL28A1-202ENST00000430711 TRIM10Q9UDY6 481 aa8.21□□□□□ -1.1
COL28A1-202ENST00000430711 BCL9O00512 1426 aa8.21□□□□□ -1.1
COL28A1-202ENST00000430711 PLEKHG2Q9H7P9 1386 aa8.21□□□□□ -1.1
COL28A1-202ENST00000430711 TNKSO95271 1327 aa8.21□□□□□ -1.1
COL28A1-202ENST00000430711 PHLPP2Q6ZVD8 1323 aa8.21□□□□□ -1.1
COL28A1-202ENST00000430711 PDE8AO60658 829 aa8.2□□□□□ -1.1
COL28A1-202ENST00000430711 CCT6AP40227 531 aaKnown RBP8.2□□□□□ -1.1
COL28A1-202ENST00000430711 ZNF174Q15697 407 aa8.2□□□□□ -1.1
COL28A1-202ENST00000430711 CHADLQ6NUI6 762 aa8.2□□□□□ -1.1
COL28A1-202ENST00000430711 ZNF34Q8IZ26 560 aa8.2□□□□□ -1.1
COL28A1-202ENST00000430711 ENAHQ8N8S7 591 aaPredicted RBP8.2□□□□□ -1.1
COL28A1-202ENST00000430711 TMEM87BQ96K49 555 aa8.2□□□□□ -1.1
COL28A1-202ENST00000430711 CDC5LQ99459 802 aaKnown RBP8.2□□□□□ -1.1
COL28A1-202ENST00000430711 ABCF2Q9UG63 623 aa8.2□□□□□ -1.1
COL28A1-202ENST00000430711 A0A1B0GUL6 1792 aa8.2□□□□□ -1.1
COL28A1-202ENST00000430711 XDHP47989 1333 aa8.2□□□□□ -1.1
COL28A1-202ENST00000430711 LIFRP42702 1097 aa8.2□□□□□ -1.1
COL28A1-202ENST00000430711 GABPB1Q06547 395 aaPredicted RBP8.2□□□□□ -1.1
COL28A1-202ENST00000430711 ITPK1Q13572 414 aa8.2□□□□□ -1.1
COL28A1-202ENST00000430711 CUL4BQ13620 913 aa8.2□□□□□ -1.1
COL28A1-202ENST00000430711 NR1I3Q14994 352 aa8.2□□□□□ -1.1
COL28A1-202ENST00000430711 WTAPQ15007 396 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms