RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 TSPY8P0CW00 308 aa17.69■□□□□ 0.42
GARNL3-204ENST00000429629 HAND2P61296 217 aa17.69■□□□□ 0.42
GARNL3-204ENST00000429629 SIAH1Q8IUQ4 282 aa17.69■□□□□ 0.42
GARNL3-204ENST00000429629 TBC1D10CQ8IV04 446 aa17.69■□□□□ 0.42
GARNL3-204ENST00000429629 KCNB2Q92953 911 aa17.69■□□□□ 0.42
GARNL3-204ENST00000429629 C12orf42Q96LP6 360 aa17.69■□□□□ 0.42
GARNL3-204ENST00000429629 TTC14Q96N46 770 aa17.69■□□□□ 0.42
GARNL3-204ENST00000429629 CFHR5Q9BXR6 569 aa17.69■□□□□ 0.42
GARNL3-204ENST00000429629 MTMR4Q9NYA4 1195 aa17.69■□□□□ 0.42
GARNL3-204ENST00000429629 TMX2Q9Y320 296 aa17.69■□□□□ 0.42
GARNL3-204ENST00000429629 TACC3Q9Y6A5 838 aa17.69■□□□□ 0.42
GARNL3-204ENST00000429629 MYH1P12882 1939 aa17.68■□□□□ 0.42
GARNL3-204ENST00000429629 SIPA1L1O43166 1804 aa17.68■□□□□ 0.42
GARNL3-204ENST00000429629 PRDM1O75626 825 aa17.68■□□□□ 0.42
GARNL3-204ENST00000429629 TRDNQ13061 729 aa17.68■□□□□ 0.42
GARNL3-204ENST00000429629 MOGSQ13724 837 aa17.68■□□□□ 0.42
GARNL3-204ENST00000429629 USP17L2Q6R6M4 530 aa17.68■□□□□ 0.42
GARNL3-204ENST00000429629 ANKRD23Q86SG2 305 aa17.68■□□□□ 0.42
GARNL3-204ENST00000429629 NAV1Q8NEY1 1877 aa17.68■□□□□ 0.42
GARNL3-204ENST00000429629 BRI3BPQ8WY22 251 aa17.68■□□□□ 0.42
GARNL3-204ENST00000429629 ZIC5Q96T25 663 aa17.68■□□□□ 0.42
GARNL3-204ENST00000429629 ARHGEF10LQ9HCE6 1279 aa17.68■□□□□ 0.42
GARNL3-204ENST00000429629 WBP1LQ9NX94 342 aa17.68■□□□□ 0.42
GARNL3-204ENST00000429629 SAGE1Q9NXZ1 904 aa17.68■□□□□ 0.42
GARNL3-204ENST00000429629 CCL15-CCL14A0A0B4J2E2 113 aa17.67■□□□□ 0.42
GARNL3-204ENST00000429629 TSPY2A6NKD2 308 aa17.67■□□□□ 0.42
GARNL3-204ENST00000429629 SLC27A2O14975 620 aa17.67■□□□□ 0.42
GARNL3-204ENST00000429629 RANBP6O60518 1105 aaKnown RBP17.67■□□□□ 0.42
GARNL3-204ENST00000429629 ICA1Q05084 483 aa17.67■□□□□ 0.42
GARNL3-204ENST00000429629 GRM1Q13255 1194 aa17.67■□□□□ 0.42
GARNL3-204ENST00000429629 CCL15Q16663 113 aa17.67■□□□□ 0.42
GARNL3-204ENST00000429629 SHROOM1Q2M3G4 852 aaPredicted RBP17.67■□□□□ 0.42
GARNL3-204ENST00000429629 CREB3L3Q68CJ9 461 aa17.67■□□□□ 0.42
GARNL3-204ENST00000429629 IFNL1Q8IU54 200 aa17.67■□□□□ 0.42
GARNL3-204ENST00000429629 PTPN18Q99952 460 aa17.67■□□□□ 0.42
GARNL3-204ENST00000429629 MTA3Q9BTC8 594 aa17.67■□□□□ 0.42
GARNL3-204ENST00000429629 INCENPQ9NQS7 918 aa17.67■□□□□ 0.42
GARNL3-204ENST00000429629 TRIM75PA6NK02 468 aa17.66■□□□□ 0.42
GARNL3-204ENST00000429629 TTLL1O95922 423 aa17.66■□□□□ 0.42
GARNL3-204ENST00000429629 ZKSCAN1P17029 563 aaPredicted RBP17.66■□□□□ 0.42
GARNL3-204ENST00000429629 HOXA7P31268 230 aaPredicted RBP17.66■□□□□ 0.42
GARNL3-204ENST00000429629 MKRN3Q13064 507 aaKnown RBP17.66■□□□□ 0.42
GARNL3-204ENST00000429629 DGKHQ86XP1 1220 aa17.66■□□□□ 0.42
GARNL3-204ENST00000429629 STK11IPQ8N1F8 1099 aa17.66■□□□□ 0.42
GARNL3-204ENST00000429629 ANKS1AQ92625 1134 aa17.66■□□□□ 0.42
GARNL3-204ENST00000429629 LPAR1Q92633 364 aa17.66■□□□□ 0.42
GARNL3-204ENST00000429629 USP26Q9BXU7 913 aa17.66■□□□□ 0.42
GARNL3-204ENST00000429629 TMOD4Q9NZQ9 345 aa17.66■□□□□ 0.42
GARNL3-204ENST00000429629 ZSWIM5Q9P217 1185 aa17.66■□□□□ 0.42
GARNL3-204ENST00000429629 AK9Q5TCS8 1911 aa17.66■□□□□ 0.42
GARNL3-204ENST00000429629 A0A1W2PRG0 241 aa17.65■□□□□ 0.42
GARNL3-204ENST00000429629 E7EWF7 191 aa17.65■□□□□ 0.42
GARNL3-204ENST00000429629 EEF2P13639 858 aaKnown RBP17.65■□□□□ 0.42
GARNL3-204ENST00000429629 HSPA4P34932 840 aa17.65■□□□□ 0.42
GARNL3-204ENST00000429629 PABPC4Q13310 644 aaKnown RBP eCLIP17.65■□□□□ 0.42
GARNL3-204ENST00000429629 KRT32Q14532 448 aa17.65■□□□□ 0.42
GARNL3-204ENST00000429629 NOM1Q5C9Z4 860 aaKnown RBP17.65■□□□□ 0.42
GARNL3-204ENST00000429629 FAM47AQ5JRC9 791 aa17.65■□□□□ 0.42
GARNL3-204ENST00000429629 GPAT2Q6NUI2 795 aa17.65■□□□□ 0.42
GARNL3-204ENST00000429629 CCDC84Q86UT8 332 aaPredicted RBP17.65■□□□□ 0.42
GARNL3-204ENST00000429629 IQCA1Q86XH1 822 aa17.65■□□□□ 0.42
GARNL3-204ENST00000429629 NCOA7Q8NI08 942 aa17.65■□□□□ 0.42
GARNL3-204ENST00000429629 ACER1Q8TDN7 264 aa17.65■□□□□ 0.42
GARNL3-204ENST00000429629 CEP95Q96GE4 821 aa17.65■□□□□ 0.42
GARNL3-204ENST00000429629 BEGAINQ9BUH8 593 aa17.65■□□□□ 0.42
GARNL3-204ENST00000429629 IL17RBQ9NRM6 502 aa17.65■□□□□ 0.42
GARNL3-204ENST00000429629 TOMM22Q9NS69 142 aa17.65■□□□□ 0.42
GARNL3-204ENST00000429629 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.65■□□□□ 0.42
GARNL3-204ENST00000429629 AGTPBP1Q9UPW5 1226 aa17.65■□□□□ 0.42
GARNL3-204ENST00000429629 BTBD19C9JJ37 291 aa17.64■□□□□ 0.41
GARNL3-204ENST00000429629 MTMR2Q13614 643 aa17.64■□□□□ 0.41
GARNL3-204ENST00000429629 VCPKMTQ9H867 229 aa17.64■□□□□ 0.41
GARNL3-204ENST00000429629 EMILIN3Q9NT22 766 aa17.64■□□□□ 0.41
GARNL3-204ENST00000429629 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.64■□□□□ 0.41
GARNL3-204ENST00000429629 IGF2BP3O00425 579 aaKnown RBP eCLIP17.63■□□□□ 0.41
GARNL3-204ENST00000429629 KDM4AO75164 1064 aa17.63■□□□□ 0.41
GARNL3-204ENST00000429629 HMGCS2P54868 508 aa17.63■□□□□ 0.41
GARNL3-204ENST00000429629 RRP12Q5JTH9 1297 aaKnown RBP17.63■□□□□ 0.41
GARNL3-204ENST00000429629 GMCL1P1Q8NEA9 526 aa17.63■□□□□ 0.41
GARNL3-204ENST00000429629 FEZ1Q99689 392 aa17.63■□□□□ 0.41
GARNL3-204ENST00000429629 RNF186Q9NXI6 227 aa17.63■□□□□ 0.41
GARNL3-204ENST00000429629 CLIP2Q9UDT6 1046 aa17.63■□□□□ 0.41
GARNL3-204ENST00000429629 NEDD4P46934 1319 aa17.63■□□□□ 0.41
GARNL3-204ENST00000429629 BAZ2AQ9UIF9 1905 aaKnown RBP17.62■□□□□ 0.41
GARNL3-204ENST00000429629 THSD7BQ9C0I4 1608 aa17.62■□□□□ 0.41
GARNL3-204ENST00000429629 B4E1Z4 1266 aa17.62■□□□□ 0.41
GARNL3-204ENST00000429629 HMGB1P09429 215 aaKnown RBP17.62■□□□□ 0.41
GARNL3-204ENST00000429629 RALYLQ86SE5 291 aaKnown RBP17.62■□□□□ 0.41
GARNL3-204ENST00000429629 GOPCQ9HD26 462 aa17.62■□□□□ 0.41
GARNL3-204ENST00000429629 PDHXO00330 501 aa17.61■□□□□ 0.41
GARNL3-204ENST00000429629 TOP1P11387 765 aaKnown RBP17.61■□□□□ 0.41
GARNL3-204ENST00000429629 MCCP23508 829 aa17.61■□□□□ 0.41
GARNL3-204ENST00000429629 C8orf34Q49A92 452 aa17.61■□□□□ 0.41
GARNL3-204ENST00000429629 RCSD1Q6JBY9 416 aa17.61■□□□□ 0.41
GARNL3-204ENST00000429629 STOX1Q6ZVD7 989 aa17.61■□□□□ 0.41
GARNL3-204ENST00000429629 FAM43AQ8N2R8 423 aa17.61■□□□□ 0.41
GARNL3-204ENST00000429629 ZSCAN10Q96SZ4 725 aaPredicted RBP17.61■□□□□ 0.41
GARNL3-204ENST00000429629 PNMA3Q9UL41 463 aa17.61■□□□□ 0.41
GARNL3-204ENST00000429629 OTOFQ9HC10 1997 aa17.6■□□□□ 0.41
GARNL3-204ENST00000429629 USP17L15C9J2P7 530 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms