RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 AKR1B1P15121 316 aa11.37□□□□□ -0.59
TRIM39-208ENST00000428555 EN2P19622 333 aaPredicted RBP11.37□□□□□ -0.59
TRIM39-208ENST00000428555 HERVK_113P62684 666 aa11.37□□□□□ -0.59
TRIM39-208ENST00000428555 FAM110CQ1W6H9 321 aa11.37□□□□□ -0.59
TRIM39-208ENST00000428555 SIAH1Q8IUQ4 282 aa11.37□□□□□ -0.59
TRIM39-208ENST00000428555 AMOTL1Q8IY63 956 aa11.37□□□□□ -0.59
TRIM39-208ENST00000428555 STK11IPQ8N1F8 1099 aa11.37□□□□□ -0.59
TRIM39-208ENST00000428555 FSD1Q9BTV5 496 aa11.37□□□□□ -0.59
TRIM39-208ENST00000428555 KIAA1683Q9H0B3 1180 aa11.37□□□□□ -0.59
TRIM39-208ENST00000428555 RBPJLQ9UBG7 517 aa11.37□□□□□ -0.59
TRIM39-208ENST00000428555 STAP2Q9UGK3 403 aa11.37□□□□□ -0.59
TRIM39-208ENST00000428555 SWAP70Q9UH65 585 aa11.37□□□□□ -0.59
TRIM39-208ENST00000428555 MAST2Q6P0Q8 1798 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 MINDY4BA8MYZ0 360 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 USP17L15C9J2P7 530 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 PATL2C9JE40 543 aaKnown RBP11.36□□□□□ -0.59
TRIM39-208ENST00000428555 USP17L13C9JLJ4 530 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 USP17L11C9JVI0 530 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 USP17L18D6R9N7 530 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 USP17L22D6RA61 530 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 USP17L17D6RBQ6 530 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 USP17L19D6RCP7 530 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 USP17L20D6RJB6 530 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 GPAA1O43292 621 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 APPP05067 770 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 GRK4P32298 578 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 FLT3LGP49771 235 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 USP14P54578 494 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 PDE1AP54750 535 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 USP17L24Q0WX57 530 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 LRRFIP1Q32MZ4 808 aaKnown RBP11.36□□□□□ -0.59
TRIM39-208ENST00000428555 Q3C1V9 767 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 SBK1Q52WX2 424 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 POTEEQ6S8J3 1075 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 CATSPERGQ6ZRH7 1159 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 C16orf86Q6ZW13 317 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 SMC5Q8IY18 1101 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 COA7Q96BR5 231 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 C12orf42Q96LP6 360 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 LNPKQ9C0E8 428 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 TXNRD2Q9NNW7 524 aa11.36□□□□□ -0.59
TRIM39-208ENST00000428555 BIN2Q9UBW5 565 aaPredicted RBP11.36□□□□□ -0.59
TRIM39-208ENST00000428555 SIPA1L1O43166 1804 aa11.35□□□□□ -0.59
TRIM39-208ENST00000428555 MTFR1Q15390 333 aa11.35□□□□□ -0.59
TRIM39-208ENST00000428555 KIAA1755Q5JYT7 1200 aa11.35□□□□□ -0.59
TRIM39-208ENST00000428555 ZMYM1Q5SVZ6 1142 aa11.35□□□□□ -0.59
TRIM39-208ENST00000428555 GIMAP6Q6P9H5 292 aa11.35□□□□□ -0.59
TRIM39-208ENST00000428555 TMEM179Q6ZVK1 233 aa11.35□□□□□ -0.59
TRIM39-208ENST00000428555 CLEC10AQ8IUN9 316 aa11.35□□□□□ -0.59
TRIM39-208ENST00000428555 GPRC5AQ8NFJ5 357 aa11.35□□□□□ -0.59
TRIM39-208ENST00000428555 CCDC17Q96LX7 622 aa11.35□□□□□ -0.59
TRIM39-208ENST00000428555 PAGR1Q9BTK6 254 aa11.35□□□□□ -0.59
TRIM39-208ENST00000428555 MORF4L1Q9UBU8 362 aa11.35□□□□□ -0.59
TRIM39-208ENST00000428555 TAOK2Q9UL54 1235 aa11.35□□□□□ -0.59
TRIM39-208ENST00000428555 DOCK1Q14185 1865 aa11.34□□□□□ -0.59
TRIM39-208ENST00000428555 MKI67P46013 3256 aaKnown RBP11.34□□□□□ -0.59
TRIM39-208ENST00000428555 KIAA0100Q14667 2235 aaKnown RBP11.34□□□□□ -0.59
TRIM39-208ENST00000428555 ADCY3O60266 1144 aa11.34□□□□□ -0.59
TRIM39-208ENST00000428555 PRKCSHP14314 528 aaPredicted RBP11.34□□□□□ -0.59
TRIM39-208ENST00000428555 ELNP15502 786 aa11.34□□□□□ -0.59
TRIM39-208ENST00000428555 GNAT2P19087 354 aa11.34□□□□□ -0.59
TRIM39-208ENST00000428555 VCAM1P19320 739 aa11.34□□□□□ -0.59
TRIM39-208ENST00000428555 IRX6P78412 446 aaPredicted RBP11.34□□□□□ -0.59
TRIM39-208ENST00000428555 IFNL3Q8IZI9 196 aa11.34□□□□□ -0.59
TRIM39-208ENST00000428555 EVI5LQ96CN4 794 aa11.34□□□□□ -0.59
TRIM39-208ENST00000428555 RPAP3Q9H6T3 665 aaPredicted RBP11.34□□□□□ -0.59
TRIM39-208ENST00000428555 MKNK2Q9HBH9 465 aa11.34□□□□□ -0.59
TRIM39-208ENST00000428555 EPB41L4AQ9HCS5 686 aaPredicted RBP11.34□□□□□ -0.59
TRIM39-208ENST00000428555 ARPP21Q9UBL0 812 aaPredicted RBP11.34□□□□□ -0.59
TRIM39-208ENST00000428555 GJD2Q9UKL4 321 aa11.34□□□□□ -0.59
TRIM39-208ENST00000428555 PHIPQ8WWQ0 1821 aa11.33□□□□□ -0.6
TRIM39-208ENST00000428555 EEF2P13639 858 aaKnown RBP11.33□□□□□ -0.6
TRIM39-208ENST00000428555 TDO2P48775 406 aa11.33□□□□□ -0.6
TRIM39-208ENST00000428555 ATP2B2Q01814 1243 aa11.33□□□□□ -0.6
TRIM39-208ENST00000428555 NUCB1Q02818 461 aa11.33□□□□□ -0.6
TRIM39-208ENST00000428555 IRF5Q13568 498 aa11.33□□□□□ -0.6
TRIM39-208ENST00000428555 CCDC129Q6ZRS4 1044 aa11.33□□□□□ -0.6
TRIM39-208ENST00000428555 CHD1LQ86WJ1 897 aa11.33□□□□□ -0.6
TRIM39-208ENST00000428555 SLAIN1Q8ND83 568 aa11.33□□□□□ -0.6
TRIM39-208ENST00000428555 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.33□□□□□ -0.6
TRIM39-208ENST00000428555 PORCNQ9H237 461 aa11.33□□□□□ -0.6
TRIM39-208ENST00000428555 TMX2Q9Y320 296 aa11.33□□□□□ -0.6
TRIM39-208ENST00000428555 RABGAP1Q9Y3P9 1069 aa11.33□□□□□ -0.6
TRIM39-208ENST00000428555 CDK5RAP2Q96SN8 1893 aa11.32□□□□□ -0.6
TRIM39-208ENST00000428555 BRCA2P51587 3418 aa11.32□□□□□ -0.6
TRIM39-208ENST00000428555 CNMDO75829 334 aa11.32□□□□□ -0.6
TRIM39-208ENST00000428555 CCL5P13501 91 aa11.32□□□□□ -0.6
TRIM39-208ENST00000428555 RASA1P20936 1047 aa11.32□□□□□ -0.6
TRIM39-208ENST00000428555 ERVK-9P63128 1117 aa11.32□□□□□ -0.6
TRIM39-208ENST00000428555 ERVK-24P63145 666 aa11.32□□□□□ -0.6
TRIM39-208ENST00000428555 UBXN2AP68543 259 aa11.32□□□□□ -0.6
TRIM39-208ENST00000428555 ICA1Q05084 483 aa11.32□□□□□ -0.6
TRIM39-208ENST00000428555 COG2Q14746 738 aa11.32□□□□□ -0.6
TRIM39-208ENST00000428555 CCAR1Q8IX12 1150 aaKnown RBP11.32□□□□□ -0.6
TRIM39-208ENST00000428555 SPICE1Q8N0Z3 855 aa11.32□□□□□ -0.6
TRIM39-208ENST00000428555 PXYLP1Q8TE99 480 aa11.32□□□□□ -0.6
TRIM39-208ENST00000428555 GTF3C2Q8WUA4 911 aaPredicted RBP11.32□□□□□ -0.6
TRIM39-208ENST00000428555 NACAP1Q9BZK3 213 aa11.32□□□□□ -0.6
TRIM39-208ENST00000428555 RNF208Q9H0X6 261 aa11.32□□□□□ -0.6
TRIM39-208ENST00000428555 KANSL2Q9H9L4 492 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms