RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 SLC44A5Q8NCS7 719 aa24.76■■□□□ 1.55
HSPG2-205ENST00000427897 SH3TC2Q8TF17 1288 aa24.76■■□□□ 1.55
HSPG2-205ENST00000427897 OSBP2Q969R2 916 aa24.76■■□□□ 1.55
HSPG2-205ENST00000427897 CCDC17Q96LX7 622 aa24.76■■□□□ 1.55
HSPG2-205ENST00000427897 EMILIN3Q9NT22 766 aa24.76■■□□□ 1.55
HSPG2-205ENST00000427897 MINDY4BA8MYZ0 360 aa24.75■■□□□ 1.55
HSPG2-205ENST00000427897 GPAA1O43292 621 aa24.75■■□□□ 1.55
HSPG2-205ENST00000427897 TDO2P48775 406 aa24.75■■□□□ 1.55
HSPG2-205ENST00000427897 CTR9Q6PD62 1173 aa24.75■■□□□ 1.55
HSPG2-205ENST00000427897 P2RX7Q99572 595 aaKnown RBP24.75■■□□□ 1.55
HSPG2-205ENST00000427897 LNPKQ9C0E8 428 aa24.75■■□□□ 1.55
HSPG2-205ENST00000427897 KIAA1683Q9H0B3 1180 aa24.75■■□□□ 1.55
HSPG2-205ENST00000427897 MYH8P13535 1937 aa24.74■■□□□ 1.55
HSPG2-205ENST00000427897 CDK8P49336 464 aa24.74■■□□□ 1.55
HSPG2-205ENST00000427897 PRKCZQ05513 592 aa24.74■■□□□ 1.55
HSPG2-205ENST00000427897 GIMAP6Q6P9H5 292 aa24.74■■□□□ 1.55
HSPG2-205ENST00000427897 ACER1Q8TDN7 264 aa24.74■■□□□ 1.55
HSPG2-205ENST00000427897 NACAP1Q9BZK3 213 aa24.74■■□□□ 1.55
HSPG2-205ENST00000427897 MKNK2Q9HBH9 465 aa24.74■■□□□ 1.55
HSPG2-205ENST00000427897 ARHGEF10LQ9HCE6 1279 aa24.74■■□□□ 1.55
HSPG2-205ENST00000427897 MGAMO43451 1857 aa24.74■■□□□ 1.55
HSPG2-205ENST00000427897 USP17L15C9J2P7 530 aa24.73■■□□□ 1.55
HSPG2-205ENST00000427897 USP17L13C9JLJ4 530 aa24.73■■□□□ 1.55
HSPG2-205ENST00000427897 USP17L11C9JVI0 530 aa24.73■■□□□ 1.55
HSPG2-205ENST00000427897 USP17L18D6R9N7 530 aa24.73■■□□□ 1.55
HSPG2-205ENST00000427897 USP17L22D6RA61 530 aa24.73■■□□□ 1.55
HSPG2-205ENST00000427897 USP17L17D6RBQ6 530 aa24.73■■□□□ 1.55
HSPG2-205ENST00000427897 USP17L19D6RCP7 530 aa24.73■■□□□ 1.55
HSPG2-205ENST00000427897 USP17L20D6RJB6 530 aa24.73■■□□□ 1.55
HSPG2-205ENST00000427897 GRK4P32298 578 aa24.73■■□□□ 1.55
HSPG2-205ENST00000427897 HERVK_113P62684 666 aa24.73■■□□□ 1.55
HSPG2-205ENST00000427897 USP17L24Q0WX57 530 aa24.73■■□□□ 1.55
HSPG2-205ENST00000427897 STK11IPQ8N1F8 1099 aa24.73■■□□□ 1.55
HSPG2-205ENST00000427897 EVI5LQ96CN4 794 aa24.73■■□□□ 1.55
HSPG2-205ENST00000427897 ZNF333Q96JL9 665 aa24.73■■□□□ 1.55
HSPG2-205ENST00000427897 CWC22Q9HCG8 908 aaKnown RBP24.73■■□□□ 1.55
HSPG2-205ENST00000427897 PDE1AP54750 535 aa24.72■■□□□ 1.55
HSPG2-205ENST00000427897 C16orf86Q6ZW13 317 aa24.72■■□□□ 1.55
HSPG2-205ENST00000427897 GTF3C2Q8WUA4 911 aaPredicted RBP24.72■■□□□ 1.55
HSPG2-205ENST00000427897 PAGR1Q9BTK6 254 aa24.72■■□□□ 1.55
HSPG2-205ENST00000427897 SH2D4AQ9H788 454 aa24.72■■□□□ 1.55
HSPG2-205ENST00000427897 GABRQQ9UN88 632 aa24.72■■□□□ 1.55
HSPG2-205ENST00000427897 GSG1L2A8MUP6 293 aa24.71■■□□□ 1.55
HSPG2-205ENST00000427897 PATL2C9JE40 543 aaKnown RBP24.71■■□□□ 1.55
HSPG2-205ENST00000427897 M0R2C6 588 aa24.71■■□□□ 1.55
HSPG2-205ENST00000427897 GUCY1A2P33402 732 aa24.71■■□□□ 1.55
HSPG2-205ENST00000427897 UBXN2AP68543 259 aa24.71■■□□□ 1.55
HSPG2-205ENST00000427897 ATP2B2Q01814 1243 aa24.71■■□□□ 1.55
HSPG2-205ENST00000427897 GPRC5AQ8NFJ5 357 aa24.71■■□□□ 1.55
HSPG2-205ENST00000427897 C12orf42Q96LP6 360 aa24.71■■□□□ 1.55
HSPG2-205ENST00000427897 ZNF287Q9HBT7 754 aa24.71■■□□□ 1.55
HSPG2-205ENST00000427897 STAP2Q9UGK3 403 aa24.71■■□□□ 1.55
HSPG2-205ENST00000427897 TRIM6-TRIM34B2RNG4 842 aa24.7■■□□□ 1.54
HSPG2-205ENST00000427897 AKR1B1P15121 316 aa24.7■■□□□ 1.54
HSPG2-205ENST00000427897 FLT3LGP49771 235 aa24.7■■□□□ 1.54
HSPG2-205ENST00000427897 SBK1Q52WX2 424 aa24.7■■□□□ 1.54
HSPG2-205ENST00000427897 POTEFA5A3E0 1075 aa24.69■■□□□ 1.54
HSPG2-205ENST00000427897 ADCY3O60266 1144 aa24.69■■□□□ 1.54
HSPG2-205ENST00000427897 IGHDP01880 384 aa24.69■■□□□ 1.54
HSPG2-205ENST00000427897 ICA1Q05084 483 aa24.69■■□□□ 1.54
HSPG2-205ENST00000427897 SMC5Q8IY18 1101 aa24.69■■□□□ 1.54
HSPG2-205ENST00000427897 SLAIN1Q8ND83 568 aa24.69■■□□□ 1.54
HSPG2-205ENST00000427897 SEC62Q99442 399 aaKnown RBP24.69■■□□□ 1.54
HSPG2-205ENST00000427897 RPAP3Q9H6T3 665 aaPredicted RBP24.69■■□□□ 1.54
HSPG2-205ENST00000427897 MORF4L1Q9UBU8 362 aa24.69■■□□□ 1.54
HSPG2-205ENST00000427897 SALL3Q9BXA9 1300 aa24.68■■□□□ 1.54
HSPG2-205ENST00000427897 VCAM1P19320 739 aa24.68■■□□□ 1.54
HSPG2-205ENST00000427897 ZMYM1Q5SVZ6 1142 aa24.68■■□□□ 1.54
HSPG2-205ENST00000427897 CATSPERGQ6ZRH7 1159 aa24.68■■□□□ 1.54
HSPG2-205ENST00000427897 CHD1LQ86WJ1 897 aa24.68■■□□□ 1.54
HSPG2-205ENST00000427897 RILPL2Q969X0 211 aa24.68■■□□□ 1.54
HSPG2-205ENST00000427897 NAPBQ9H115 298 aa24.68■■□□□ 1.54
HSPG2-205ENST00000427897 RAD21O60216 631 aa24.67■■□□□ 1.54
HSPG2-205ENST00000427897 SLC3A2P08195 630 aaKnown RBP24.67■■□□□ 1.54
HSPG2-205ENST00000427897 IFNL3Q8IZI9 196 aa24.67■■□□□ 1.54
HSPG2-205ENST00000427897 ZNF444Q8N0Y2 327 aaPredicted RBP24.67■■□□□ 1.54
HSPG2-205ENST00000427897 TANGO6Q9C0B7 1094 aa24.67■■□□□ 1.54
HSPG2-205ENST00000427897 SMIM22K7EJ46 135 aa24.66■■□□□ 1.54
HSPG2-205ENST00000427897 EN2P19622 333 aaPredicted RBP24.66■■□□□ 1.54
HSPG2-205ENST00000427897 IRX6P78412 446 aaPredicted RBP24.66■■□□□ 1.54
HSPG2-205ENST00000427897 KANSL2Q9H9L4 492 aa24.66■■□□□ 1.54
HSPG2-205ENST00000427897 RBPJLQ9UBG7 517 aa24.66■■□□□ 1.54
HSPG2-205ENST00000427897 A0A1W2PRG0 241 aa24.65■■□□□ 1.54
HSPG2-205ENST00000427897 MAPK4P31152 587 aa24.65■■□□□ 1.54
HSPG2-205ENST00000427897 ERVK-9P63128 1117 aa24.65■■□□□ 1.54
HSPG2-205ENST00000427897 ERVK-24P63145 666 aa24.65■■□□□ 1.54
HSPG2-205ENST00000427897 CCNA1P78396 465 aa24.65■■□□□ 1.54
HSPG2-205ENST00000427897 IRF5Q13568 498 aa24.65■■□□□ 1.54
HSPG2-205ENST00000427897 HOXC10Q9NYD6 342 aa24.65■■□□□ 1.54
HSPG2-205ENST00000427897 RABGAP1Q9Y3P9 1069 aa24.65■■□□□ 1.54
HSPG2-205ENST00000427897 CENPBP07199 599 aaPredicted RBP24.64■■□□□ 1.54
HSPG2-205ENST00000427897 NUCB1Q02818 461 aa24.64■■□□□ 1.54
HSPG2-205ENST00000427897 WDR78Q5VTH9 848 aa24.64■■□□□ 1.54
HSPG2-205ENST00000427897 SAMD1Q6SPF0 538 aaPredicted RBP24.64■■□□□ 1.54
HSPG2-205ENST00000427897 LPAR1Q92633 364 aa24.64■■□□□ 1.54
HSPG2-205ENST00000427897 TXNRD2Q9NNW7 524 aa24.64■■□□□ 1.54
HSPG2-205ENST00000427897 TMX2Q9Y320 296 aa24.64■■□□□ 1.54
HSPG2-205ENST00000427897 PEX10O60683 326 aa24.63■■□□□ 1.53
HSPG2-205ENST00000427897 EEF2P13639 858 aaKnown RBP24.63■■□□□ 1.53
HSPG2-205ENST00000427897 ELNP15502 786 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms