RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 KIF22Q14807 665 aa17.81■□□□□ 0.44
RTN4-210ENST00000427710 USP17L2Q6R6M4 530 aa17.81■□□□□ 0.44
RTN4-210ENST00000427710 IFNL3Q8IZI9 196 aa17.81■□□□□ 0.44
RTN4-210ENST00000427710 SMCR8Q8TEV9 937 aaPredicted RBP17.81■□□□□ 0.44
RTN4-210ENST00000427710 FAM227BQ96M60 508 aa17.81■□□□□ 0.44
RTN4-210ENST00000427710 ASCC2Q9H1I8 757 aaPredicted RBP17.81■□□□□ 0.44
RTN4-210ENST00000427710 ARPP21Q9UBL0 812 aaPredicted RBP17.81■□□□□ 0.44
RTN4-210ENST00000427710 PTPN22Q9Y2R2 807 aa17.81■□□□□ 0.44
RTN4-210ENST00000427710 CENPFP49454 3210 aa17.81■□□□□ 0.44
RTN4-210ENST00000427710 GREB1LQ9C091 1923 aaPredicted RBP17.8■□□□□ 0.44
RTN4-210ENST00000427710 A0A0D9SFI3 127 aa17.8■□□□□ 0.44
RTN4-210ENST00000427710 C19orf81C9J6K1 198 aa17.8■□□□□ 0.44
RTN4-210ENST00000427710 OSBPP22059 807 aa17.8■□□□□ 0.44
RTN4-210ENST00000427710 PSMC4P43686 418 aa17.8■□□□□ 0.44
RTN4-210ENST00000427710 SBK1Q52WX2 424 aa17.8■□□□□ 0.44
RTN4-210ENST00000427710 ANKRD13CQ8N6S4 541 aa17.8■□□□□ 0.44
RTN4-210ENST00000427710 TRIM47Q96LD4 638 aa17.8■□□□□ 0.44
RTN4-210ENST00000427710 PNMA3Q9UL41 463 aa17.8■□□□□ 0.44
RTN4-210ENST00000427710 PTCH2Q9Y6C5 1203 aa17.8■□□□□ 0.44
RTN4-210ENST00000427710 A0A1W2PRG0 241 aa17.79■□□□□ 0.44
RTN4-210ENST00000427710 FOXP2O15409 715 aa17.79■□□□□ 0.44
RTN4-210ENST00000427710 FMNL1O95466 1100 aaPredicted RBP17.79■□□□□ 0.44
RTN4-210ENST00000427710 GNAT2P19087 354 aa17.79■□□□□ 0.44
RTN4-210ENST00000427710 SOX10P56693 466 aa17.79■□□□□ 0.44
RTN4-210ENST00000427710 NMIQ13287 307 aaPredicted RBP17.79■□□□□ 0.44
RTN4-210ENST00000427710 VPS53Q5VIR6 699 aa17.79■□□□□ 0.44
RTN4-210ENST00000427710 GIMAP6Q6P9H5 292 aa17.79■□□□□ 0.44
RTN4-210ENST00000427710 P2RX7Q99572 595 aaKnown RBP17.79■□□□□ 0.44
RTN4-210ENST00000427710 OSBPL3Q9H4L5 887 aa17.79■□□□□ 0.44
RTN4-210ENST00000427710 IRX3P78415 501 aaPredicted RBP17.78■□□□□ 0.44
RTN4-210ENST00000427710 PABPC4Q13310 644 aaKnown RBP eCLIP17.78■□□□□ 0.44
RTN4-210ENST00000427710 TMEM179Q6ZVK1 233 aa17.78■□□□□ 0.44
RTN4-210ENST00000427710 RLFQ13129 1914 aa17.77■□□□□ 0.44
RTN4-210ENST00000427710 PRDM1O75626 825 aa17.77■□□□□ 0.44
RTN4-210ENST00000427710 ATP2B2Q01814 1243 aa17.77■□□□□ 0.44
RTN4-210ENST00000427710 KIAA1755Q5JYT7 1200 aa17.77■□□□□ 0.44
RTN4-210ENST00000427710 SIAH1Q8IUQ4 282 aa17.77■□□□□ 0.44
RTN4-210ENST00000427710 KIAA1683Q9H0B3 1180 aa17.77■□□□□ 0.44
RTN4-210ENST00000427710 NAPBQ9H115 298 aa17.77■□□□□ 0.44
RTN4-210ENST00000427710 MKNK2Q9HBH9 465 aa17.77■□□□□ 0.44
RTN4-210ENST00000427710 PARP14Q460N5 1801 aa17.77■□□□□ 0.43
RTN4-210ENST00000427710 RASA1P20936 1047 aa17.76■□□□□ 0.43
RTN4-210ENST00000427710 HOXA7P31268 230 aaPredicted RBP17.76■□□□□ 0.43
RTN4-210ENST00000427710 ICA1Q05084 483 aa17.76■□□□□ 0.43
RTN4-210ENST00000427710 ARHGEF6Q15052 776 aa17.76■□□□□ 0.43
RTN4-210ENST00000427710 ZNF589Q86UQ0 364 aaPredicted RBP17.76■□□□□ 0.43
RTN4-210ENST00000427710 C12orf42Q96LP6 360 aa17.76■□□□□ 0.43
RTN4-210ENST00000427710 NACAP1Q9BZK3 213 aa17.76■□□□□ 0.43
RTN4-210ENST00000427710 HELLSQ9NRZ9 838 aa17.76■□□□□ 0.43
RTN4-210ENST00000427710 GABRQQ9UN88 632 aa17.76■□□□□ 0.43
RTN4-210ENST00000427710 PLXNB2O15031 1838 aa17.75■□□□□ 0.43
RTN4-210ENST00000427710 COL11A1P12107 1806 aaPredicted RBP17.75■□□□□ 0.43
RTN4-210ENST00000427710 MYCP01106 439 aaPredicted RBP17.75■□□□□ 0.43
RTN4-210ENST00000427710 VCAM1P19320 739 aa17.75■□□□□ 0.43
RTN4-210ENST00000427710 SDSP20132 328 aa17.75■□□□□ 0.43
RTN4-210ENST00000427710 USP14P54578 494 aa17.75■□□□□ 0.43
RTN4-210ENST00000427710 FCGRTP55899 365 aa17.75■□□□□ 0.43
RTN4-210ENST00000427710 HERVK_113P62684 666 aa17.75■□□□□ 0.43
RTN4-210ENST00000427710 CTDSPL2Q05D32 466 aa17.75■□□□□ 0.43
RTN4-210ENST00000427710 MCMDC2Q4G0Z9 681 aa17.75■□□□□ 0.43
RTN4-210ENST00000427710 POTEEQ6S8J3 1075 aa17.75■□□□□ 0.43
RTN4-210ENST00000427710 CCDC17Q96LX7 622 aa17.75■□□□□ 0.43
RTN4-210ENST00000427710 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.75■□□□□ 0.43
RTN4-210ENST00000427710 RPAP3Q9H6T3 665 aaPredicted RBP17.75■□□□□ 0.43
RTN4-210ENST00000427710 TXNRD2Q9NNW7 524 aa17.75■□□□□ 0.43
RTN4-210ENST00000427710 INCENPQ9NQS7 918 aa17.75■□□□□ 0.43
RTN4-210ENST00000427710 ROBO3Q96MS0 1386 aa17.75■□□□□ 0.43
RTN4-210ENST00000427710 EEF2P13639 858 aaKnown RBP17.74■□□□□ 0.43
RTN4-210ENST00000427710 GCLCP48506 637 aaPredicted RBP17.74■□□□□ 0.43
RTN4-210ENST00000427710 PPARAQ07869 468 aa17.74■□□□□ 0.43
RTN4-210ENST00000427710 FAM110CQ1W6H9 321 aa17.74■□□□□ 0.43
RTN4-210ENST00000427710 SPICE1Q8N0Z3 855 aa17.74■□□□□ 0.43
RTN4-210ENST00000427710 SH3TC2Q8TF17 1288 aa17.74■□□□□ 0.43
RTN4-210ENST00000427710 PAGR1Q9BTK6 254 aa17.74■□□□□ 0.43
RTN4-210ENST00000427710 SRRDQ9UH36 339 aa17.74■□□□□ 0.43
RTN4-210ENST00000427710 TACC3Q9Y6A5 838 aa17.74■□□□□ 0.43
RTN4-210ENST00000427710 MYPNQ86TC9 1320 aa17.73■□□□□ 0.43
RTN4-210ENST00000427710 USP17L15C9J2P7 530 aa17.73■□□□□ 0.43
RTN4-210ENST00000427710 USP17L13C9JLJ4 530 aa17.73■□□□□ 0.43
RTN4-210ENST00000427710 USP17L11C9JVI0 530 aa17.73■□□□□ 0.43
RTN4-210ENST00000427710 USP17L18D6R9N7 530 aa17.73■□□□□ 0.43
RTN4-210ENST00000427710 USP17L22D6RA61 530 aa17.73■□□□□ 0.43
RTN4-210ENST00000427710 USP17L17D6RBQ6 530 aa17.73■□□□□ 0.43
RTN4-210ENST00000427710 USP17L19D6RCP7 530 aa17.73■□□□□ 0.43
RTN4-210ENST00000427710 USP17L20D6RJB6 530 aa17.73■□□□□ 0.43
RTN4-210ENST00000427710 GSPT1P15170 499 aaKnown RBP17.73■□□□□ 0.43
RTN4-210ENST00000427710 PRKCZQ05513 592 aa17.73■□□□□ 0.43
RTN4-210ENST00000427710 USP17L24Q0WX57 530 aa17.73■□□□□ 0.43
RTN4-210ENST00000427710 CATSPERGQ6ZRH7 1159 aa17.73■□□□□ 0.43
RTN4-210ENST00000427710 SKAP1Q86WV1 359 aa17.73■□□□□ 0.43
RTN4-210ENST00000427710 ARHGEF10LQ9HCE6 1279 aa17.73■□□□□ 0.43
RTN4-210ENST00000427710 ZNFX1Q9P2E3 1918 aaKnown RBP17.72■□□□□ 0.43
RTN4-210ENST00000427710 RAD21O60216 631 aa17.72■□□□□ 0.43
RTN4-210ENST00000427710 Q3C1V9 767 aa17.72■□□□□ 0.43
RTN4-210ENST00000427710 SLC9C1Q4G0N8 1177 aa17.72■□□□□ 0.43
RTN4-210ENST00000427710 FAM47AQ5JRC9 791 aa17.72■□□□□ 0.43
RTN4-210ENST00000427710 TTC22Q5TAA0 569 aa17.72■□□□□ 0.43
RTN4-210ENST00000427710 SAMD1Q6SPF0 538 aaPredicted RBP17.72■□□□□ 0.43
RTN4-210ENST00000427710 CWC27Q6UX04 472 aaKnown RBP17.72■□□□□ 0.43
RTN4-210ENST00000427710 ZNF444Q8N0Y2 327 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms