RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 ZBTB48P10074 688 aaPredicted RBP9.72□□□□□ -0.85
SMARCAL1-206ENST00000427645 EN2P19622 333 aaPredicted RBP9.72□□□□□ -0.85
SMARCAL1-206ENST00000427645 IREB2P48200 963 aaKnown RBP9.72□□□□□ -0.85
SMARCAL1-206ENST00000427645 TNNI2P48788 182 aa9.72□□□□□ -0.85
SMARCAL1-206ENST00000427645 CACNB3P54284 484 aa9.72□□□□□ -0.85
SMARCAL1-206ENST00000427645 EXOSC10Q01780 885 aaKnown RBP9.72□□□□□ -0.85
SMARCAL1-206ENST00000427645 CTDSPL2Q05D32 466 aa9.72□□□□□ -0.85
SMARCAL1-206ENST00000427645 SART3Q15020 963 aaKnown RBP9.72□□□□□ -0.85
SMARCAL1-206ENST00000427645 STOX1Q6ZVD7 989 aa9.72□□□□□ -0.85
SMARCAL1-206ENST00000427645 FOXP4Q8IVH2 680 aaPredicted RBP9.72□□□□□ -0.85
SMARCAL1-206ENST00000427645 MAPKAPK5Q8IW41 473 aa9.72□□□□□ -0.85
SMARCAL1-206ENST00000427645 ZNF444Q8N0Y2 327 aaPredicted RBP9.72□□□□□ -0.85
SMARCAL1-206ENST00000427645 TMTC2Q8N394 836 aa9.72□□□□□ -0.85
SMARCAL1-206ENST00000427645 TMEM87BQ96K49 555 aa9.72□□□□□ -0.85
SMARCAL1-206ENST00000427645 OSBPL5Q9H0X9 879 aaPredicted RBP9.72□□□□□ -0.85
SMARCAL1-206ENST00000427645 LIMCH1Q9UPQ0 1083 aa9.72□□□□□ -0.85
SMARCAL1-206ENST00000427645 FLT1P17948 1338 aa9.72□□□□□ -0.85
SMARCAL1-206ENST00000427645 FOCADQ5VW36 1801 aa9.72□□□□□ -0.85
SMARCAL1-206ENST00000427645 ECM29Q5VYK3 1845 aa9.72□□□□□ -0.85
SMARCAL1-206ENST00000427645 BAZ2AQ9UIF9 1905 aaKnown RBP9.72□□□□□ -0.85
SMARCAL1-206ENST00000427645 CDK5RAP2Q96SN8 1893 aa9.71□□□□□ -0.85
SMARCAL1-206ENST00000427645 ORC4O43929 436 aa9.71□□□□□ -0.86
SMARCAL1-206ENST00000427645 PICALMQ13492 652 aa9.71□□□□□ -0.86
SMARCAL1-206ENST00000427645 CCDC178Q5BJE1 867 aa9.71□□□□□ -0.86
SMARCAL1-206ENST00000427645 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.71□□□□□ -0.86
SMARCAL1-206ENST00000427645 FAM83AQ86UY5 434 aa9.71□□□□□ -0.86
SMARCAL1-206ENST00000427645 IQCA1Q86XH1 822 aa9.71□□□□□ -0.86
SMARCAL1-206ENST00000427645 MB21D2Q8IYB1 491 aaPredicted RBP9.71□□□□□ -0.86
SMARCAL1-206ENST00000427645 ANKRD13AQ8IZ07 590 aa9.71□□□□□ -0.86
SMARCAL1-206ENST00000427645 MS4A4AQ96JQ5 239 aa9.71□□□□□ -0.86
SMARCAL1-206ENST00000427645 TEPSINQ96N21 525 aa9.71□□□□□ -0.86
SMARCAL1-206ENST00000427645 AGXT2Q9BYV1 514 aa9.71□□□□□ -0.86
SMARCAL1-206ENST00000427645 MKNK2Q9HBH9 465 aa9.71□□□□□ -0.86
SMARCAL1-206ENST00000427645 SH2B1Q9NRF2 756 aaPredicted RBP9.71□□□□□ -0.86
SMARCAL1-206ENST00000427645 TOMM22Q9NS69 142 aa9.71□□□□□ -0.86
SMARCAL1-206ENST00000427645 ZSWIM5Q9P217 1185 aa9.71□□□□□ -0.86
SMARCAL1-206ENST00000427645 PCDH10Q9P2E7 1040 aa9.71□□□□□ -0.86
SMARCAL1-206ENST00000427645 PI4KBQ9UBF8 816 aa9.71□□□□□ -0.86
SMARCAL1-206ENST00000427645 SWAP70Q9UH65 585 aa9.71□□□□□ -0.86
SMARCAL1-206ENST00000427645 PTPN22Q9Y2R2 807 aa9.71□□□□□ -0.86
SMARCAL1-206ENST00000427645 PPP2R3BQ9Y5P8 575 aa9.71□□□□□ -0.86
SMARCAL1-206ENST00000427645 TAF6LQ9Y6J9 622 aa9.71□□□□□ -0.86
SMARCAL1-206ENST00000427645 MYH1P12882 1939 aa9.71□□□□□ -0.86
SMARCAL1-206ENST00000427645 PDE4DIPQ5VU43 2346 aa9.7□□□□□ -0.86
SMARCAL1-206ENST00000427645 ERICH2A1L162 156 aa9.7□□□□□ -0.86
SMARCAL1-206ENST00000427645 B4E1Z4 1266 aa9.7□□□□□ -0.86
SMARCAL1-206ENST00000427645 HSP90AA1P07900 732 aaKnown RBP9.7□□□□□ -0.86
SMARCAL1-206ENST00000427645 AK2P54819 239 aa9.7□□□□□ -0.86
SMARCAL1-206ENST00000427645 SP3Q02447 781 aa9.7□□□□□ -0.86
SMARCAL1-206ENST00000427645 TNFAIP1Q13829 316 aa9.7□□□□□ -0.86
SMARCAL1-206ENST00000427645 VGLL4Q14135 290 aa9.7□□□□□ -0.86
SMARCAL1-206ENST00000427645 RRP12Q5JTH9 1297 aaKnown RBP9.7□□□□□ -0.86
SMARCAL1-206ENST00000427645 Q6ZUG5 572 aa9.7□□□□□ -0.86
SMARCAL1-206ENST00000427645 TBC1D10CQ8IV04 446 aa9.7□□□□□ -0.86
SMARCAL1-206ENST00000427645 FAM151AQ8WW52 585 aa9.7□□□□□ -0.86
SMARCAL1-206ENST00000427645 BRI3BPQ8WY22 251 aa9.7□□□□□ -0.86
SMARCAL1-206ENST00000427645 NBPF3Q9H094 633 aa9.7□□□□□ -0.86
SMARCAL1-206ENST00000427645 EHD4Q9H223 541 aa9.7□□□□□ -0.86
SMARCAL1-206ENST00000427645 EFCC1Q9HA90 598 aa9.7□□□□□ -0.86
SMARCAL1-206ENST00000427645 NAV1Q8NEY1 1877 aa9.7□□□□□ -0.86
SMARCAL1-206ENST00000427645 CCL15-CCL14A0A0B4J2E2 113 aa9.69□□□□□ -0.86
SMARCAL1-206ENST00000427645 TESPA1A2RU30 521 aaPredicted RBP9.69□□□□□ -0.86
SMARCAL1-206ENST00000427645 PRC1O43663 620 aa9.69□□□□□ -0.86
SMARCAL1-206ENST00000427645 RANBP6O60518 1105 aaKnown RBP9.69□□□□□ -0.86
SMARCAL1-206ENST00000427645 KDM4AO75164 1064 aa9.69□□□□□ -0.86
SMARCAL1-206ENST00000427645 CPA1P15085 419 aa9.69□□□□□ -0.86
SMARCAL1-206ENST00000427645 LIFRP42702 1097 aa9.69□□□□□ -0.86
SMARCAL1-206ENST00000427645 PLCD1P51178 756 aa9.69□□□□□ -0.86
SMARCAL1-206ENST00000427645 EVCP57679 992 aa9.69□□□□□ -0.86
SMARCAL1-206ENST00000427645 CCL15Q16663 113 aa9.69□□□□□ -0.86
SMARCAL1-206ENST00000427645 C16orf86Q6ZW13 317 aa9.69□□□□□ -0.86
SMARCAL1-206ENST00000427645 ZSCAN29Q8IWY8 852 aaPredicted RBP9.69□□□□□ -0.86
SMARCAL1-206ENST00000427645 FAM43AQ8N2R8 423 aa9.69□□□□□ -0.86
SMARCAL1-206ENST00000427645 OTUD5Q96G74 571 aa9.69□□□□□ -0.86
SMARCAL1-206ENST00000427645 ZNF274Q96GC6 653 aaPredicted RBP9.69□□□□□ -0.86
SMARCAL1-206ENST00000427645 ERO1AQ96HE7 468 aa9.69□□□□□ -0.86
SMARCAL1-206ENST00000427645 INTS4Q96HW7 963 aaKnown RBP9.69□□□□□ -0.86
SMARCAL1-206ENST00000427645 TMX3Q96JJ7 454 aa9.69□□□□□ -0.86
SMARCAL1-206ENST00000427645 ROBO3Q96MS0 1386 aa9.69□□□□□ -0.86
SMARCAL1-206ENST00000427645 UBAC1Q9BSL1 405 aa9.69□□□□□ -0.86
SMARCAL1-206ENST00000427645 FAM198AQ9UFP1 575 aa9.69□□□□□ -0.86
SMARCAL1-206ENST00000427645 SAP30BPQ9UHR5 308 aaKnown RBP9.69□□□□□ -0.86
SMARCAL1-206ENST00000427645 SERPINB13Q9UIV8 391 aa9.69□□□□□ -0.86
SMARCAL1-206ENST00000427645 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.69□□□□□ -0.86
SMARCAL1-206ENST00000427645 LAMB1P07942 1786 aa9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 COL2A1P02458 1487 aaPredicted RBP9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 ATRNL1Q5VV63 1379 aa9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 NEDD4P46934 1319 aa9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 CYP2D7A0A087X1C5 515 aa9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 TSPY2A6NKD2 308 aa9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 IFIT3O14879 490 aaKnown RBP9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 CD2BP2O95400 341 aaKnown RBP9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 PRR29P0C7W0 189 aa9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 CDK8P49336 464 aa9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 MAP3K9P80192 1104 aa9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 TCP10Q12799 353 aa9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 NFIAQ12857 509 aa9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 TOB2Q14106 344 aaPredicted RBP9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 PPP2R5BQ15173 497 aa9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 PPP4R3BQ5MIZ7 849 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms