RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 FBXL16Q8N461 479 aa18.13■□□□□ 0.49
COL11A1-204ENST00000427239 CEP95Q96GE4 821 aa18.13■□□□□ 0.49
COL11A1-204ENST00000427239 SNCAIPQ9Y6H5 919 aa18.13■□□□□ 0.49
COL11A1-204ENST00000427239 IFIT3O14879 490 aaKnown RBP18.12■□□□□ 0.49
COL11A1-204ENST00000427239 TTLL1O95922 423 aa18.12■□□□□ 0.49
COL11A1-204ENST00000427239 ANTXR2P58335 489 aa18.12■□□□□ 0.49
COL11A1-204ENST00000427239 RABEP1Q15276 862 aa18.12■□□□□ 0.49
COL11A1-204ENST00000427239 CHST3Q7LGC8 479 aa18.12■□□□□ 0.49
COL11A1-204ENST00000427239 ERO1BQ86YB8 467 aa18.12■□□□□ 0.49
COL11A1-204ENST00000427239 IGDCC4Q8TDY8 1250 aa18.12■□□□□ 0.49
COL11A1-204ENST00000427239 ANKS1AQ92625 1134 aa18.12■□□□□ 0.49
COL11A1-204ENST00000427239 ZKSCAN3Q9BRR0 538 aa18.12■□□□□ 0.49
COL11A1-204ENST00000427239 UPF3BQ9BZI7 483 aaKnown RBP18.12■□□□□ 0.49
COL11A1-204ENST00000427239 AS3MTQ9HBK9 375 aa18.12■□□□□ 0.49
COL11A1-204ENST00000427239 NYAP2Q9P242 653 aa18.12■□□□□ 0.49
COL11A1-204ENST00000427239 NMT2O60551 498 aa18.12■□□□□ 0.49
COL11A1-204ENST00000427239 APLP1P51693 650 aa18.12■□□□□ 0.49
COL11A1-204ENST00000427239 NEK4P51957 841 aa18.12■□□□□ 0.49
COL11A1-204ENST00000427239 ICA1Q05084 483 aa18.12■□□□□ 0.49
COL11A1-204ENST00000427239 PPATQ06203 517 aa18.12■□□□□ 0.49
COL11A1-204ENST00000427239 SHROOM1Q2M3G4 852 aaPredicted RBP18.12■□□□□ 0.49
COL11A1-204ENST00000427239 MKL1Q969V6 931 aa18.12■□□□□ 0.49
COL11A1-204ENST00000427239 CLMNQ96JQ2 1002 aa18.12■□□□□ 0.49
COL11A1-204ENST00000427239 WDR18Q9BV38 432 aa18.12■□□□□ 0.49
COL11A1-204ENST00000427239 ALDH8A1Q9H2A2 487 aaPredicted RBP18.12■□□□□ 0.49
COL11A1-204ENST00000427239 SYNPO2Q9UMS6 1093 aa18.12■□□□□ 0.49
COL11A1-204ENST00000427239 STX8Q9UNK0 236 aa18.12■□□□□ 0.49
COL11A1-204ENST00000427239 TLL2Q9Y6L7 1015 aa18.12■□□□□ 0.49
COL11A1-204ENST00000427239 ZHX2Q9Y6X8 837 aa18.12■□□□□ 0.49
COL11A1-204ENST00000427239 TNKSO95271 1327 aa18.12■□□□□ 0.49
COL11A1-204ENST00000427239 TRPM7Q96QT4 1865 aa18.11■□□□□ 0.49
COL11A1-204ENST00000427239 CPA1P15085 419 aa18.11■□□□□ 0.49
COL11A1-204ENST00000427239 LIFRP42702 1097 aa18.11■□□□□ 0.49
COL11A1-204ENST00000427239 FGD1P98174 961 aa18.11■□□□□ 0.49
COL11A1-204ENST00000427239 COL9A3Q14050 684 aaPredicted RBP18.11■□□□□ 0.49
COL11A1-204ENST00000427239 TMEM67Q5HYA8 995 aa18.11■□□□□ 0.49
COL11A1-204ENST00000427239 ENAHQ8N8S7 591 aaPredicted RBP18.11■□□□□ 0.49
COL11A1-204ENST00000427239 HHIPL1Q96JK4 782 aa18.11■□□□□ 0.49
COL11A1-204ENST00000427239 ELP3Q9H9T3 547 aa18.11■□□□□ 0.49
COL11A1-204ENST00000427239 ARHGEF10LQ9HCE6 1279 aa18.11■□□□□ 0.49
COL11A1-204ENST00000427239 CLIP2Q9UDT6 1046 aa18.11■□□□□ 0.49
COL11A1-204ENST00000427239 SPDYE5A6NIY4 337 aa18.1■□□□□ 0.49
COL11A1-204ENST00000427239 EEF2P13639 858 aaKnown RBP18.1■□□□□ 0.49
COL11A1-204ENST00000427239 WTAPQ15007 396 aa18.1■□□□□ 0.49
COL11A1-204ENST00000427239 SEC23AQ15436 765 aa18.1■□□□□ 0.49
COL11A1-204ENST00000427239 IFIT1BQ5T764 474 aaKnown RBP18.1■□□□□ 0.49
COL11A1-204ENST00000427239 RCSD1Q6JBY9 416 aa18.1■□□□□ 0.49
COL11A1-204ENST00000427239 SIAH1Q8IUQ4 282 aa18.1■□□□□ 0.49
COL11A1-204ENST00000427239 SH2D4AQ9H788 454 aa18.1■□□□□ 0.49
COL11A1-204ENST00000427239 PDRG1Q9NUG6 133 aa18.1■□□□□ 0.49
COL11A1-204ENST00000427239 MYH8P13535 1937 aa18.1■□□□□ 0.49
COL11A1-204ENST00000427239 ZNF280CQ8ND82 737 aa18.09■□□□□ 0.49
COL11A1-204ENST00000427239 AGXT2Q9BYV1 514 aa18.09■□□□□ 0.49
COL11A1-204ENST00000427239 CREBZFQ9NS37 354 aa18.09■□□□□ 0.49
COL11A1-204ENST00000427239 ABT1Q9ULW3 272 aaKnown RBP18.09■□□□□ 0.49
COL11A1-204ENST00000427239 SH2B2O14492 632 aaPredicted RBP18.09■□□□□ 0.49
COL11A1-204ENST00000427239 TOP1P11387 765 aaKnown RBP18.09■□□□□ 0.49
COL11A1-204ENST00000427239 ANKRD1Q15327 319 aa18.09■□□□□ 0.49
COL11A1-204ENST00000427239 Q6ZUG5 572 aa18.09■□□□□ 0.49
COL11A1-204ENST00000427239 TCEANC2Q96MN5 208 aa18.09■□□□□ 0.49
COL11A1-204ENST00000427239 TMX2Q9Y320 296 aa18.09■□□□□ 0.49
COL11A1-204ENST00000427239 AFG3L2Q9Y4W6 797 aa18.09■□□□□ 0.49
COL11A1-204ENST00000427239 USP17L10C9JJH3 530 aa18.08■□□□□ 0.48
COL11A1-204ENST00000427239 ATP2B2Q01814 1243 aa18.08■□□□□ 0.48
COL11A1-204ENST00000427239 SPP2Q13103 211 aa18.08■□□□□ 0.48
COL11A1-204ENST00000427239 RGMBQ6NW40 437 aa18.08■□□□□ 0.48
COL11A1-204ENST00000427239 SGMS1Q86VZ5 419 aa18.08■□□□□ 0.48
COL11A1-204ENST00000427239 OPTNQ96CV9 577 aa18.08■□□□□ 0.48
COL11A1-204ENST00000427239 TMEM47Q9BQJ4 181 aa18.08■□□□□ 0.48
COL11A1-204ENST00000427239 LRRC2Q9BYS8 371 aa18.08■□□□□ 0.48
COL11A1-204ENST00000427239 KAT14Q9H8E8 782 aa18.08■□□□□ 0.48
COL11A1-204ENST00000427239 LY9Q9HBG7 655 aa18.08■□□□□ 0.48
COL11A1-204ENST00000427239 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.08■□□□□ 0.48
COL11A1-204ENST00000427239 C19orf81C9J6K1 198 aa18.07■□□□□ 0.48
COL11A1-204ENST00000427239 CXCL11O14625 94 aa18.07■□□□□ 0.48
COL11A1-204ENST00000427239 ST18O60284 1047 aa18.07■□□□□ 0.48
COL11A1-204ENST00000427239 ZNF157P51786 506 aaPredicted RBP18.07■□□□□ 0.48
COL11A1-204ENST00000427239 PPIL2Q13356 520 aa18.07■□□□□ 0.48
COL11A1-204ENST00000427239 CLEC10AQ8IUN9 316 aa18.07■□□□□ 0.48
COL11A1-204ENST00000427239 CCDC102AQ96A19 550 aa18.07■□□□□ 0.48
COL11A1-204ENST00000427239 OTUD5Q96G74 571 aa18.07■□□□□ 0.48
COL11A1-204ENST00000427239 KIAA1683Q9H0B3 1180 aa18.07■□□□□ 0.48
COL11A1-204ENST00000427239 A0A1W2PRG0 241 aa18.06■□□□□ 0.48
COL11A1-204ENST00000427239 CCDC69A6NI79 296 aa18.06■□□□□ 0.48
COL11A1-204ENST00000427239 ZBTB48P10074 688 aaPredicted RBP18.06■□□□□ 0.48
COL11A1-204ENST00000427239 USP14P54578 494 aa18.06■□□□□ 0.48
COL11A1-204ENST00000427239 BACE1P56817 501 aa18.06■□□□□ 0.48
COL11A1-204ENST00000427239 NFXL1Q6ZNB6 911 aa18.06■□□□□ 0.48
COL11A1-204ENST00000427239 CCDC84Q86UT8 332 aaPredicted RBP18.06■□□□□ 0.48
COL11A1-204ENST00000427239 ACER1Q8TDN7 264 aa18.06■□□□□ 0.48
COL11A1-204ENST00000427239 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.06■□□□□ 0.48
COL11A1-204ENST00000427239 GREB1LQ9C091 1923 aaPredicted RBP18.06■□□□□ 0.48
COL11A1-204ENST00000427239 DOCK1Q14185 1865 aa18.06■□□□□ 0.48
COL11A1-204ENST00000427239 TRIM75PA6NK02 468 aa18.06■□□□□ 0.48
COL11A1-204ENST00000427239 IRF6O14896 467 aa18.06■□□□□ 0.48
COL11A1-204ENST00000427239 ECE1P42892 770 aa18.06■□□□□ 0.48
COL11A1-204ENST00000427239 PNMA1Q8ND90 353 aa18.06■□□□□ 0.48
COL11A1-204ENST00000427239 BRF1Q92994 677 aa18.06■□□□□ 0.48
COL11A1-204ENST00000427239 FEZ1Q99689 392 aa18.06■□□□□ 0.48
COL11A1-204ENST00000427239 GOPCQ9HD26 462 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms