RNA–Protein interactions for RNA: ENST00000426909.1

SYNC-204, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-204ENST00000426909 TGFBRAP1Q8WUH2 860 aa12.87□□□□□ -0.35
SYNC-204ENST00000426909 ZKSCAN4Q969J2 545 aaPredicted RBP12.87□□□□□ -0.35
SYNC-204ENST00000426909 FLT1P17948 1338 aa12.87□□□□□ -0.35
SYNC-204ENST00000426909 MAGEB6P1A0A0J9YX57 407 aa12.86□□□□□ -0.35
SYNC-204ENST00000426909 APPP05067 770 aa12.86□□□□□ -0.35
SYNC-204ENST00000426909 HSPA8P11142 646 aaKnown RBP12.86□□□□□ -0.35
SYNC-204ENST00000426909 USP5P45974 858 aa12.86□□□□□ -0.35
SYNC-204ENST00000426909 LBX1P52954 281 aa12.86□□□□□ -0.35
SYNC-204ENST00000426909 DYNLL1P63167 89 aaKnown RBP12.86□□□□□ -0.35
SYNC-204ENST00000426909 FOXD4L5Q5VV16 416 aaPredicted RBP12.86□□□□□ -0.35
SYNC-204ENST00000426909 ERO1BQ86YB8 467 aa12.86□□□□□ -0.35
SYNC-204ENST00000426909 FOXD4L4Q8WXT5 416 aaPredicted RBP12.86□□□□□ -0.35
SYNC-204ENST00000426909 MTA3Q9BTC8 594 aa12.86□□□□□ -0.35
SYNC-204ENST00000426909 CNNM2Q9H8M5 875 aa12.86□□□□□ -0.35
SYNC-204ENST00000426909 PRDM10Q9NQV6 1147 aa12.86□□□□□ -0.35
SYNC-204ENST00000426909 ZNF112Q9UJU3 913 aa12.86□□□□□ -0.35
SYNC-204ENST00000426909 SNCAIPQ9Y6H5 919 aa12.86□□□□□ -0.35
SYNC-204ENST00000426909 MYO5AQ9Y4I1 1855 aaKnown RBP12.86□□□□□ -0.35
SYNC-204ENST00000426909 SPDYE5A6NIY4 337 aa12.85□□□□□ -0.35
SYNC-204ENST00000426909 PRC1O43663 620 aa12.85□□□□□ -0.35
SYNC-204ENST00000426909 TBC1D12O60347 775 aa12.85□□□□□ -0.35
SYNC-204ENST00000426909 TRPA1O75762 1119 aa12.85□□□□□ -0.35
SYNC-204ENST00000426909 MBD4O95243 580 aa12.85□□□□□ -0.35
SYNC-204ENST00000426909 ALDH1A1P00352 501 aa12.85□□□□□ -0.35
SYNC-204ENST00000426909 MAP3K10Q02779 954 aa12.85□□□□□ -0.35
SYNC-204ENST00000426909 SCRN1Q12765 414 aa12.85□□□□□ -0.35
SYNC-204ENST00000426909 COL9A3Q14050 684 aaPredicted RBP12.85□□□□□ -0.35
SYNC-204ENST00000426909 NOL9Q5SY16 702 aaKnown RBP12.85□□□□□ -0.35
SYNC-204ENST00000426909 OTUD7BQ6GQQ9 843 aa12.85□□□□□ -0.35
SYNC-204ENST00000426909 MAPKAPK5Q8IW41 473 aa12.85□□□□□ -0.35
SYNC-204ENST00000426909 FAM184AQ8NB25 1140 aa12.85□□□□□ -0.35
SYNC-204ENST00000426909 OTUD5Q96G74 571 aa12.85□□□□□ -0.35
SYNC-204ENST00000426909 TMEM87BQ96K49 555 aa12.85□□□□□ -0.35
SYNC-204ENST00000426909 TRIM34Q9BYJ4 488 aa12.85□□□□□ -0.35
SYNC-204ENST00000426909 NAPBQ9H115 298 aa12.85□□□□□ -0.35
SYNC-204ENST00000426909 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.85□□□□□ -0.35
SYNC-204ENST00000426909 RNF186Q9NXI6 227 aa12.85□□□□□ -0.35
SYNC-204ENST00000426909 PI4KBQ9UBF8 816 aa12.85□□□□□ -0.35
SYNC-204ENST00000426909 HERC5Q9UII4 1024 aaKnown RBP12.85□□□□□ -0.35
SYNC-204ENST00000426909 VPS37CA5D8V6 355 aaPredicted RBP12.84□□□□□ -0.35
SYNC-204ENST00000426909 HLA-DOAP06340 250 aa12.84□□□□□ -0.35
SYNC-204ENST00000426909 PDIA3P30101 505 aaKnown RBP12.84□□□□□ -0.35
SYNC-204ENST00000426909 INPP5BP32019 993 aa12.84□□□□□ -0.35
SYNC-204ENST00000426909 GTF2A2P52657 109 aa12.84□□□□□ -0.35
SYNC-204ENST00000426909 HAND2P61296 217 aa12.84□□□□□ -0.35
SYNC-204ENST00000426909 UBE2HP62256 183 aa12.84□□□□□ -0.35
SYNC-204ENST00000426909 KRT85P78386 507 aa12.84□□□□□ -0.35
SYNC-204ENST00000426909 PPATQ06203 517 aa12.84□□□□□ -0.35
SYNC-204ENST00000426909 STK3Q13188 491 aa12.84□□□□□ -0.35
SYNC-204ENST00000426909 IFNL3Q8IZI9 196 aa12.84□□□□□ -0.35
SYNC-204ENST00000426909 GPT2Q8TD30 523 aa12.84□□□□□ -0.35
SYNC-204ENST00000426909 RIOK1Q9BRS2 568 aaKnown RBP12.84□□□□□ -0.35
SYNC-204ENST00000426909 CRNKL1Q9BZJ0 848 aaKnown RBP12.84□□□□□ -0.35
SYNC-204ENST00000426909 KRT23Q9C075 422 aa12.84□□□□□ -0.35
SYNC-204ENST00000426909 ZSCAN16Q9H4T2 348 aaPredicted RBP12.84□□□□□ -0.35
SYNC-204ENST00000426909 PICK1Q9NRD5 415 aa12.84□□□□□ -0.35
SYNC-204ENST00000426909 TSKSQ9UJT2 592 aa12.84□□□□□ -0.35
SYNC-204ENST00000426909 ELP1O95163 1332 aa12.84□□□□□ -0.35
SYNC-204ENST00000426909 PHF20L1A8MW92 1017 aa12.83□□□□□ -0.36
SYNC-204ENST00000426909 CTNND1O60716 968 aaKnown RBP12.83□□□□□ -0.36
SYNC-204ENST00000426909 PCP11498 1178 aaKnown RBP12.83□□□□□ -0.36
SYNC-204ENST00000426909 GJA5P36382 358 aa12.83□□□□□ -0.36
SYNC-204ENST00000426909 APOBRQ0VD83 1088 aa12.83□□□□□ -0.36
SYNC-204ENST00000426909 PPIL2Q13356 520 aa12.83□□□□□ -0.36
SYNC-204ENST00000426909 ZSCAN23Q3MJ62 389 aa12.83□□□□□ -0.36
SYNC-204ENST00000426909 CAVIN1Q6NZI2 390 aaKnown RBP12.83□□□□□ -0.36
SYNC-204ENST00000426909 GIMAP6Q6P9H5 292 aa12.83□□□□□ -0.36
SYNC-204ENST00000426909 SCYL3Q8IZE3 742 aa12.83□□□□□ -0.36
SYNC-204ENST00000426909 CRACR2BQ8N4Y2 399 aaPredicted RBP12.83□□□□□ -0.36
SYNC-204ENST00000426909 NSUN7Q8NE18 718 aaKnown RBP12.83□□□□□ -0.36
SYNC-204ENST00000426909 CNKSR2Q8WXI2 1034 aa12.83□□□□□ -0.36
SYNC-204ENST00000426909 RNF41Q9H4P4 317 aaPredicted RBP12.83□□□□□ -0.36
SYNC-204ENST00000426909 GRPEL1Q9HAV7 217 aa12.83□□□□□ -0.36
SYNC-204ENST00000426909 LAMB1P07942 1786 aa12.83□□□□□ -0.36
SYNC-204ENST00000426909 FOCADQ5VW36 1801 aa12.83□□□□□ -0.36
SYNC-204ENST00000426909 TESPA1A2RU30 521 aaPredicted RBP12.82□□□□□ -0.36
SYNC-204ENST00000426909 GSG1L2A8MUP6 293 aa12.82□□□□□ -0.36
SYNC-204ENST00000426909 H3BQV1 296 aa12.82□□□□□ -0.36
SYNC-204ENST00000426909 LETM1O95202 739 aaPredicted RBP12.82□□□□□ -0.36
SYNC-204ENST00000426909 NT5C2P49902 561 aa12.82□□□□□ -0.36
SYNC-204ENST00000426909 SNAPC2Q13487 334 aa12.82□□□□□ -0.36
SYNC-204ENST00000426909 COL13A1Q5TAT6 717 aaPredicted RBP12.82□□□□□ -0.36
SYNC-204ENST00000426909 IFFO2Q5TF58 517 aa12.82□□□□□ -0.36
SYNC-204ENST00000426909 ATL3Q6DD88 541 aa12.82□□□□□ -0.36
SYNC-204ENST00000426909 IFNL1Q8IU54 200 aa12.82□□□□□ -0.36
SYNC-204ENST00000426909 FOXP4Q8IVH2 680 aaPredicted RBP12.82□□□□□ -0.36
SYNC-204ENST00000426909 LRRC2Q9BYS8 371 aa12.82□□□□□ -0.36
SYNC-204ENST00000426909 SCAND2PQ9GZW5 306 aaPredicted RBP12.82□□□□□ -0.36
SYNC-204ENST00000426909 SAP30BPQ9UHR5 308 aaKnown RBP12.82□□□□□ -0.36
SYNC-204ENST00000426909 SLC4A4Q9Y6R1 1079 aa12.82□□□□□ -0.36
SYNC-204ENST00000426909 CCL15-CCL14A0A0B4J2E2 113 aa12.81□□□□□ -0.36
SYNC-204ENST00000426909 PTPDC1A2A3K4 754 aa12.81□□□□□ -0.36
SYNC-204ENST00000426909 IRF6O14896 467 aa12.81□□□□□ -0.36
SYNC-204ENST00000426909 CDKL5O76039 1030 aa12.81□□□□□ -0.36
SYNC-204ENST00000426909 CETPP11597 493 aa12.81□□□□□ -0.36
SYNC-204ENST00000426909 TDO2P48775 406 aa12.81□□□□□ -0.36
SYNC-204ENST00000426909 ANTXR2P58335 489 aa12.81□□□□□ -0.36
SYNC-204ENST00000426909 CCL15Q16663 113 aa12.81□□□□□ -0.36
SYNC-204ENST00000426909 AKNAD1Q5T1N1 836 aa12.81□□□□□ -0.36
SYNC-204ENST00000426909 TTC6Q86TZ1 520 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms