RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 ARMT1Q9H993 441 aa8.93□□□□□ -0.98
LINC01049-201ENST00000426840 MKRN1Q9UHC7 482 aaKnown RBP8.93□□□□□ -0.98
LINC01049-201ENST00000426840 RFX7Q2KHR2 1363 aa8.93□□□□□ -0.98
LINC01049-201ENST00000426840 MYH7P12883 1935 aa8.92□□□□□ -0.98
LINC01049-201ENST00000426840 MAST2Q6P0Q8 1798 aa8.92□□□□□ -0.98
LINC01049-201ENST00000426840 DDTLA6NHG4 134 aaPredicted RBP8.92□□□□□ -0.98
LINC01049-201ENST00000426840 PRKAB2O43741 272 aa8.92□□□□□ -0.98
LINC01049-201ENST00000426840 USP2O75604 605 aaPredicted RBP8.92□□□□□ -0.98
LINC01049-201ENST00000426840 CELF2O95319 508 aaKnown RBP8.92□□□□□ -0.98
LINC01049-201ENST00000426840 S1PR4O95977 384 aa8.92□□□□□ -0.98
LINC01049-201ENST00000426840 ADH1BP00325 375 aa8.92□□□□□ -0.98
LINC01049-201ENST00000426840 HSPA6P17066 643 aa8.92□□□□□ -0.98
LINC01049-201ENST00000426840 LRRFIP1Q32MZ4 808 aaKnown RBP8.92□□□□□ -0.98
LINC01049-201ENST00000426840 SUPT20HL1Q3ZLR7 823 aa8.92□□□□□ -0.98
LINC01049-201ENST00000426840 CERS3Q8IU89 383 aa8.92□□□□□ -0.98
LINC01049-201ENST00000426840 MAPKAPK5Q8IW41 473 aa8.92□□□□□ -0.98
LINC01049-201ENST00000426840 SPIRE2Q8WWL2 714 aa8.92□□□□□ -0.98
LINC01049-201ENST00000426840 SEC62Q99442 399 aaKnown RBP8.92□□□□□ -0.98
LINC01049-201ENST00000426840 SPSB2Q99619 263 aa8.92□□□□□ -0.98
LINC01049-201ENST00000426840 TRPM7Q96QT4 1865 aa8.91□□□□□ -0.98
LINC01049-201ENST00000426840 TMEM88BA6NKF7 163 aa8.91□□□□□ -0.98
LINC01049-201ENST00000426840 M0R2C6 588 aa8.91□□□□□ -0.98
LINC01049-201ENST00000426840 MBD4O95243 580 aa8.91□□□□□ -0.98
LINC01049-201ENST00000426840 NDUFV2P19404 249 aa8.91□□□□□ -0.98
LINC01049-201ENST00000426840 USP46P62068 366 aa8.91□□□□□ -0.98
LINC01049-201ENST00000426840 MAP3K10Q02779 954 aa8.91□□□□□ -0.98
LINC01049-201ENST00000426840 PICALMQ13492 652 aa8.91□□□□□ -0.98
LINC01049-201ENST00000426840 RNF19BQ6ZMZ0 732 aa8.91□□□□□ -0.98
LINC01049-201ENST00000426840 MOB2Q70IA6 237 aa8.91□□□□□ -0.98
LINC01049-201ENST00000426840 FAM227BQ96M60 508 aa8.91□□□□□ -0.98
LINC01049-201ENST00000426840 CRNKL1Q9BZJ0 848 aaKnown RBP8.91□□□□□ -0.98
LINC01049-201ENST00000426840 OSBPL5Q9H0X9 879 aaPredicted RBP8.91□□□□□ -0.98
LINC01049-201ENST00000426840 ZNF408Q9H9D4 720 aa8.91□□□□□ -0.98
LINC01049-201ENST00000426840 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.91□□□□□ -0.98
LINC01049-201ENST00000426840 HELLSQ9NRZ9 838 aa8.91□□□□□ -0.98
LINC01049-201ENST00000426840 FZD1Q9UP38 647 aa8.91□□□□□ -0.98
LINC01049-201ENST00000426840 CDK5RAP2Q96SN8 1893 aa8.9□□□□□ -0.98
LINC01049-201ENST00000426840 FLT1P17948 1338 aa8.9□□□□□ -0.98
LINC01049-201ENST00000426840 GSG1L2A8MUP6 293 aa8.9□□□□□ -0.98
LINC01049-201ENST00000426840 UBE2Q2LH0YL09 131 aa8.9□□□□□ -0.98
LINC01049-201ENST00000426840 GPAA1O43292 621 aa8.9□□□□□ -0.98
LINC01049-201ENST00000426840 FMNL1O95466 1100 aaPredicted RBP8.9□□□□□ -0.98
LINC01049-201ENST00000426840 SLURP2P0DP57 97 aa8.9□□□□□ -0.98
LINC01049-201ENST00000426840 USP5P45974 858 aa8.9□□□□□ -0.98
LINC01049-201ENST00000426840 FKBP1BP68106 108 aa8.9□□□□□ -0.98
LINC01049-201ENST00000426840 HTRA3P83110 453 aa8.9□□□□□ -0.98
LINC01049-201ENST00000426840 NMIQ13287 307 aaPredicted RBP8.9□□□□□ -0.98
LINC01049-201ENST00000426840 PRKG1Q13976 671 aa8.9□□□□□ -0.98
LINC01049-201ENST00000426840 MAP3K11Q16584 847 aa8.9□□□□□ -0.98
LINC01049-201ENST00000426840 MCMDC2Q4G0Z9 681 aa8.9□□□□□ -0.98
LINC01049-201ENST00000426840 LDLRAD1Q5T700 205 aa8.9□□□□□ -0.98
LINC01049-201ENST00000426840 SAPCD2Q86UD0 394 aa8.9□□□□□ -0.98
LINC01049-201ENST00000426840 C2orf69Q8N8R5 385 aa8.9□□□□□ -0.98
LINC01049-201ENST00000426840 SDR42E1Q8WUS8 393 aa8.9□□□□□ -0.98
LINC01049-201ENST00000426840 AIDAQ96BJ3 306 aa8.9□□□□□ -0.98
LINC01049-201ENST00000426840 GBA2Q9HCG7 927 aaPredicted RBP8.9□□□□□ -0.98
LINC01049-201ENST00000426840 ATP8A2Q9NTI2 1148 aa8.9□□□□□ -0.98
LINC01049-201ENST00000426840 PALD1Q9ULE6 856 aa8.9□□□□□ -0.98
LINC01049-201ENST00000426840 TLL2Q9Y6L7 1015 aa8.9□□□□□ -0.98
LINC01049-201ENST00000426840 SSC5DA1L4H1 1573 aa8.9□□□□□ -0.99
LINC01049-201ENST00000426840 ATRNL1Q5VV63 1379 aa8.89□□□□□ -0.99
LINC01049-201ENST00000426840 RPAP1Q9BWH6 1393 aaPredicted RBP8.89□□□□□ -0.99
LINC01049-201ENST00000426840 A0A0D9SFI3 127 aa8.89□□□□□ -0.99
LINC01049-201ENST00000426840 PATL2C9JE40 543 aaKnown RBP8.89□□□□□ -0.99
LINC01049-201ENST00000426840 FOXP2O15409 715 aa8.89□□□□□ -0.99
LINC01049-201ENST00000426840 CHMLP26374 656 aa8.89□□□□□ -0.99
LINC01049-201ENST00000426840 NF2P35240 595 aa8.89□□□□□ -0.99
LINC01049-201ENST00000426840 GGCXP38435 758 aa8.89□□□□□ -0.99
LINC01049-201ENST00000426840 BMP2KLQ5H9B9 411 aa8.89□□□□□ -0.99
LINC01049-201ENST00000426840 CCDC129Q6ZRS4 1044 aa8.89□□□□□ -0.99
LINC01049-201ENST00000426840 MIGA2Q7L4E1 593 aa8.89□□□□□ -0.99
LINC01049-201ENST00000426840 ARMC9Q7Z3E5 817 aa8.89□□□□□ -0.99
LINC01049-201ENST00000426840 METTL16Q86W50 562 aaKnown RBP8.89□□□□□ -0.99
LINC01049-201ENST00000426840 FOXP4Q8IVH2 680 aaPredicted RBP8.89□□□□□ -0.99
LINC01049-201ENST00000426840 ZSCAN29Q8IWY8 852 aaPredicted RBP8.89□□□□□ -0.99
LINC01049-201ENST00000426840 THAP11Q96EK4 314 aa8.89□□□□□ -0.99
LINC01049-201ENST00000426840 TBC1D2Q9BYX2 928 aa8.89□□□□□ -0.99
LINC01049-201ENST00000426840 SLC6A16Q9GZN6 736 aa8.89□□□□□ -0.99
LINC01049-201ENST00000426840 DHX36Q9H2U1 1008 aaKnown RBP8.89□□□□□ -0.99
LINC01049-201ENST00000426840 DCP1AQ9NPI6 582 aaPredicted RBP8.89□□□□□ -0.99
LINC01049-201ENST00000426840 SAP30BPQ9UHR5 308 aaKnown RBP8.89□□□□□ -0.99
LINC01049-201ENST00000426840 ZNF112Q9UJU3 913 aa8.89□□□□□ -0.99
LINC01049-201ENST00000426840 ANGEL1Q9UNK9 670 aaKnown RBP8.89□□□□□ -0.99
LINC01049-201ENST00000426840 SLC4A4Q9Y6R1 1079 aa8.89□□□□□ -0.99
LINC01049-201ENST00000426840 AK9Q5TCS8 1911 aa8.89□□□□□ -0.99
LINC01049-201ENST00000426840 COL2A1P02458 1487 aaPredicted RBP8.89□□□□□ -0.99
LINC01049-201ENST00000426840 MOXD2PA6NHM9 499 aa8.88□□□□□ -0.99
LINC01049-201ENST00000426840 PHF20L1A8MW92 1017 aa8.88□□□□□ -0.99
LINC01049-201ENST00000426840 SMIM22K7EJ46 135 aa8.88□□□□□ -0.99
LINC01049-201ENST00000426840 HIP1O00291 1037 aa8.88□□□□□ -0.99
LINC01049-201ENST00000426840 PPP1R12BO60237 982 aaPredicted RBP8.88□□□□□ -0.99
LINC01049-201ENST00000426840 GNAT2P19087 354 aa8.88□□□□□ -0.99
LINC01049-201ENST00000426840 PLCD1P51178 756 aa8.88□□□□□ -0.99
LINC01049-201ENST00000426840 VPS53Q5VIR6 699 aa8.88□□□□□ -0.99
LINC01049-201ENST00000426840 GIMAP6Q6P9H5 292 aa8.88□□□□□ -0.99
LINC01049-201ENST00000426840 CWC27Q6UX04 472 aaKnown RBP8.88□□□□□ -0.99
LINC01049-201ENST00000426840 ZNF589Q86UQ0 364 aaPredicted RBP8.88□□□□□ -0.99
LINC01049-201ENST00000426840 IFNL3Q8IZI9 196 aa8.88□□□□□ -0.99
LINC01049-201ENST00000426840 SYMPKQ92797 1274 aaKnown RBP8.88□□□□□ -0.99
LINC01049-201ENST00000426840 KLRG1Q96E93 195 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms