RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 SPATA5Q8NB90 893 aa17.48■□□□□ 0.39
HDAC6-206ENST00000426196 RNPC3Q96LT9 517 aaKnown RBP17.48■□□□□ 0.39
HDAC6-206ENST00000426196 DNAJC18Q9H819 358 aa17.48■□□□□ 0.39
HDAC6-206ENST00000426196 PDLIM7Q9NR12 457 aa17.48■□□□□ 0.39
HDAC6-206ENST00000426196 CNMDO75829 334 aa17.47■□□□□ 0.39
HDAC6-206ENST00000426196 CYBAP13498 195 aa17.47■□□□□ 0.39
HDAC6-206ENST00000426196 SHROOM1Q2M3G4 852 aaPredicted RBP17.47■□□□□ 0.39
HDAC6-206ENST00000426196 PI16Q6UXB8 463 aa17.47■□□□□ 0.39
HDAC6-206ENST00000426196 SSH1Q8WYL5 1049 aa17.47■□□□□ 0.39
HDAC6-206ENST00000426196 FEZ1Q99689 392 aa17.47■□□□□ 0.39
HDAC6-206ENST00000426196 LRP2BPQ9P2M1 347 aa17.47■□□□□ 0.39
HDAC6-206ENST00000426196 MYCNP04198 464 aaPredicted RBP17.46■□□□□ 0.39
HDAC6-206ENST00000426196 SNX17Q15036 470 aa17.46■□□□□ 0.39
HDAC6-206ENST00000426196 ATF7IPQ6VMQ6 1270 aa17.46■□□□□ 0.39
HDAC6-206ENST00000426196 METTL16Q86W50 562 aaKnown RBP17.46■□□□□ 0.39
HDAC6-206ENST00000426196 MAPKAPK5Q8IW41 473 aa17.46■□□□□ 0.39
HDAC6-206ENST00000426196 TRPV1Q8NER1 839 aa17.46■□□□□ 0.39
HDAC6-206ENST00000426196 NPLOC4Q8TAT6 608 aa17.46■□□□□ 0.39
HDAC6-206ENST00000426196 TGFBRAP1Q8WUH2 860 aa17.46■□□□□ 0.39
HDAC6-206ENST00000426196 C12orf42Q96LP6 360 aa17.46■□□□□ 0.39
HDAC6-206ENST00000426196 NEUROD6Q96NK8 337 aa17.46■□□□□ 0.39
HDAC6-206ENST00000426196 AATFQ9NY61 560 aaKnown RBP eCLIP17.46■□□□□ 0.39
HDAC6-206ENST00000426196 FLT1P17948 1338 aa17.46■□□□□ 0.38
HDAC6-206ENST00000426196 MYH1P12882 1939 aa17.45■□□□□ 0.38
HDAC6-206ENST00000426196 ZNF236Q9UL36 1845 aa17.45■□□□□ 0.38
HDAC6-206ENST00000426196 BDP1A6H8Y1 2624 aa17.45■□□□□ 0.38
HDAC6-206ENST00000426196 HLA-DOAP06340 250 aa17.45■□□□□ 0.38
HDAC6-206ENST00000426196 USP14P54578 494 aa17.45■□□□□ 0.38
HDAC6-206ENST00000426196 TFCP2Q12800 502 aa17.45■□□□□ 0.38
HDAC6-206ENST00000426196 ZYXQ15942 572 aaKnown RBP17.45■□□□□ 0.38
HDAC6-206ENST00000426196 USP38Q8NB14 1042 aa17.45■□□□□ 0.38
HDAC6-206ENST00000426196 SMCHD1A6NHR9 2005 aa17.44■□□□□ 0.38
HDAC6-206ENST00000426196 TRIM43BA6NCK2 446 aa17.44■□□□□ 0.38
HDAC6-206ENST00000426196 SEPT4O43236 478 aa17.44■□□□□ 0.38
HDAC6-206ENST00000426196 ANO1Q5XXA6 986 aa17.44■□□□□ 0.38
HDAC6-206ENST00000426196 OLFML2BQ68BL8 750 aa17.44■□□□□ 0.38
HDAC6-206ENST00000426196 NAA16Q6N069 864 aaPredicted RBP17.44■□□□□ 0.38
HDAC6-206ENST00000426196 LBX2Q6XYB7 198 aa17.44■□□□□ 0.38
HDAC6-206ENST00000426196 SH3RF1Q7Z6J0 888 aa17.44■□□□□ 0.38
HDAC6-206ENST00000426196 DPP9Q86TI2 863 aa17.44■□□□□ 0.38
HDAC6-206ENST00000426196 TRIM43Q96BQ3 446 aaPredicted RBP17.44■□□□□ 0.38
HDAC6-206ENST00000426196 PALD1Q9ULE6 856 aa17.44■□□□□ 0.38
HDAC6-206ENST00000426196 GH2P01242 217 aa17.43■□□□□ 0.38
HDAC6-206ENST00000426196 DNAJB2P25686 324 aa17.43■□□□□ 0.38
HDAC6-206ENST00000426196 ARID4AP29374 1257 aaPredicted RBP17.43■□□□□ 0.38
HDAC6-206ENST00000426196 PLA2G5P39877 138 aa17.43■□□□□ 0.38
HDAC6-206ENST00000426196 ADCYAP1R1P41586 468 aa17.43■□□□□ 0.38
HDAC6-206ENST00000426196 GRIN2CQ14957 1233 aa17.43■□□□□ 0.38
HDAC6-206ENST00000426196 C1orf53Q5VUE5 145 aa17.43■□□□□ 0.38
HDAC6-206ENST00000426196 CATSPERGQ6ZRH7 1159 aa17.43■□□□□ 0.38
HDAC6-206ENST00000426196 RAPGEFL1Q9UHV5 662 aa17.43■□□□□ 0.38
HDAC6-206ENST00000426196 TACC3Q9Y6A5 838 aa17.43■□□□□ 0.38
HDAC6-206ENST00000426196 VCAM1P19320 739 aa17.42■□□□□ 0.38
HDAC6-206ENST00000426196 TLE2Q04725 743 aa17.42■□□□□ 0.38
HDAC6-206ENST00000426196 FERMT2Q96AC1 680 aa17.42■□□□□ 0.38
HDAC6-206ENST00000426196 FAM122AQ96E09 287 aa17.42■□□□□ 0.38
HDAC6-206ENST00000426196 BTBD7Q9P203 1132 aa17.42■□□□□ 0.38
HDAC6-206ENST00000426196 SAP30BPQ9UHR5 308 aaKnown RBP17.42■□□□□ 0.38
HDAC6-206ENST00000426196 IGHA2P01877 340 aa17.41■□□□□ 0.38
HDAC6-206ENST00000426196 CLTBP09497 229 aa17.41■□□□□ 0.38
HDAC6-206ENST00000426196 UQCRFS1P1P0C7P4 283 aa17.41■□□□□ 0.38
HDAC6-206ENST00000426196 ADORA2AP29274 412 aa17.41■□□□□ 0.38
HDAC6-206ENST00000426196 MCAMP43121 646 aa17.41■□□□□ 0.38
HDAC6-206ENST00000426196 PPP4CP60510 307 aa17.41■□□□□ 0.38
HDAC6-206ENST00000426196 LRRC41Q15345 812 aa17.41■□□□□ 0.38
HDAC6-206ENST00000426196 ALDH1L2Q3SY69 923 aa17.41■□□□□ 0.38
HDAC6-206ENST00000426196 ATXN2LQ8WWM7 1075 aaKnown RBP17.41■□□□□ 0.38
HDAC6-206ENST00000426196 KIAA1683Q9H0B3 1180 aa17.41■□□□□ 0.38
HDAC6-206ENST00000426196 SMC4Q9NTJ3 1288 aa17.41■□□□□ 0.38
HDAC6-206ENST00000426196 MYO5AQ9Y4I1 1855 aaKnown RBP17.41■□□□□ 0.38
HDAC6-206ENST00000426196 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.4■□□□□ 0.38
HDAC6-206ENST00000426196 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.4■□□□□ 0.38
HDAC6-206ENST00000426196 SPDYE16A6NNV3 312 aaPredicted RBP17.4■□□□□ 0.38
HDAC6-206ENST00000426196 SRGAP3O43295 1099 aa17.4■□□□□ 0.38
HDAC6-206ENST00000426196 STRNO43815 780 aa17.4■□□□□ 0.38
HDAC6-206ENST00000426196 RAG1P15918 1043 aa17.4■□□□□ 0.38
HDAC6-206ENST00000426196 RAB3GAP1Q15042 981 aa17.4■□□□□ 0.38
HDAC6-206ENST00000426196 GAS2L1Q99501 681 aaPredicted RBP17.4■□□□□ 0.38
HDAC6-206ENST00000426196 ZNF576Q9H609 170 aa17.4■□□□□ 0.38
HDAC6-206ENST00000426196 SLC5A4Q9NY91 659 aa17.4■□□□□ 0.38
HDAC6-206ENST00000426196 ZNFX1Q9P2E3 1918 aaKnown RBP17.4■□□□□ 0.38
HDAC6-206ENST00000426196 FPGSQ05932 587 aa17.39■□□□□ 0.37
HDAC6-206ENST00000426196 TIFAQ96CG3 184 aa17.39■□□□□ 0.37
HDAC6-206ENST00000426196 RPAP3Q9H6T3 665 aaPredicted RBP17.39■□□□□ 0.37
HDAC6-206ENST00000426196 THEGQ9P2T0 379 aa17.39■□□□□ 0.37
HDAC6-206ENST00000426196 ZNF521Q96K83 1311 aa17.39■□□□□ 0.37
HDAC6-206ENST00000426196 PLXNA1Q9UIW2 1896 aa17.38■□□□□ 0.37
HDAC6-206ENST00000426196 KIAA0355O15063 1070 aa17.38■□□□□ 0.37
HDAC6-206ENST00000426196 ITGB8P26012 769 aa17.38■□□□□ 0.37
HDAC6-206ENST00000426196 EPHB4P54760 987 aa17.38■□□□□ 0.37
HDAC6-206ENST00000426196 FAM47AQ5JRC9 791 aa17.38■□□□□ 0.37
HDAC6-206ENST00000426196 IL27Q8NEV9 243 aa17.38■□□□□ 0.37
HDAC6-206ENST00000426196 PPM1EQ8WY54 764 aa17.38■□□□□ 0.37
HDAC6-206ENST00000426196 MEIS3Q99687 375 aa17.38■□□□□ 0.37
HDAC6-206ENST00000426196 CHD9Q3L8U1 2897 aa17.38■□□□□ 0.37
HDAC6-206ENST00000426196 E9PSI1 815 aa17.37■□□□□ 0.37
HDAC6-206ENST00000426196 PQBP1O60828 265 aaKnown RBP17.37■□□□□ 0.37
HDAC6-206ENST00000426196 TATDN1Q6P1N9 297 aa17.37■□□□□ 0.37
HDAC6-206ENST00000426196 FAM9BQ8IZU0 186 aa17.37■□□□□ 0.37
HDAC6-206ENST00000426196 SHCBP1Q8NEM2 672 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms