RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 FAM47AQ5JRC9 791 aa7.93□□□□□ -1.14
SDCBP-203ENST00000424270 OTOP2Q7RTS6 562 aa7.93□□□□□ -1.14
SDCBP-203ENST00000424270 DZIP1Q86YF9 867 aaKnown RBP7.93□□□□□ -1.14
SDCBP-203ENST00000424270 C8orf58Q8NAV2 365 aa7.93□□□□□ -1.14
SDCBP-203ENST00000424270 LINS1Q8NG48 757 aa7.93□□□□□ -1.14
SDCBP-203ENST00000424270 MFSD14AQ96MC6 490 aa7.93□□□□□ -1.14
SDCBP-203ENST00000424270 PHOX2BQ99453 314 aa7.93□□□□□ -1.14
SDCBP-203ENST00000424270 PUS3Q9BZE2 481 aaKnown RBP7.93□□□□□ -1.14
SDCBP-203ENST00000424270 SLC5A4Q9NY91 659 aa7.93□□□□□ -1.14
SDCBP-203ENST00000424270 TRIM35Q9UPQ4 493 aa7.93□□□□□ -1.14
SDCBP-203ENST00000424270 PHF24Q9UPV7 400 aa7.93□□□□□ -1.14
SDCBP-203ENST00000424270 DOCK2Q92608 1830 aa7.93□□□□□ -1.14
SDCBP-203ENST00000424270 PLXNA1Q9UIW2 1896 aa7.93□□□□□ -1.14
SDCBP-203ENST00000424270 ATRNL1Q5VV63 1379 aa7.93□□□□□ -1.14
SDCBP-203ENST00000424270 NCOR1O75376 2440 aa7.92□□□□□ -1.14
SDCBP-203ENST00000424270 A0A1B0GUL6 1792 aa7.92□□□□□ -1.14
SDCBP-203ENST00000424270 DCXO43602 365 aa7.92□□□□□ -1.14
SDCBP-203ENST00000424270 PGK1P00558 417 aa7.92□□□□□ -1.14
SDCBP-203ENST00000424270 SLC5A1P13866 664 aa7.92□□□□□ -1.14
SDCBP-203ENST00000424270 PRDX5P30044 214 aa7.92□□□□□ -1.14
SDCBP-203ENST00000424270 HOXA7P31268 230 aaPredicted RBP7.92□□□□□ -1.14
SDCBP-203ENST00000424270 PTPN5P54829 565 aa7.92□□□□□ -1.14
SDCBP-203ENST00000424270 CASP7P55210 303 aa7.92□□□□□ -1.14
SDCBP-203ENST00000424270 BACE1P56817 501 aa7.92□□□□□ -1.14
SDCBP-203ENST00000424270 FAAP100Q0VG06 881 aa7.92□□□□□ -1.14
SDCBP-203ENST00000424270 SH3D19Q5HYK7 790 aa7.92□□□□□ -1.14
SDCBP-203ENST00000424270 EPHA10Q5JZY3 1008 aa7.92□□□□□ -1.14
SDCBP-203ENST00000424270 PRAMEF19Q5SWL8 479 aa7.92□□□□□ -1.14
SDCBP-203ENST00000424270 SH3BP5LQ7L8J4 393 aa7.92□□□□□ -1.14
SDCBP-203ENST00000424270 SLF2Q8IX21 1173 aa7.92□□□□□ -1.14
SDCBP-203ENST00000424270 NPLOC4Q8TAT6 608 aa7.92□□□□□ -1.14
SDCBP-203ENST00000424270 NUP133Q8WUM0 1156 aa7.92□□□□□ -1.14
SDCBP-203ENST00000424270 DNAAF4Q8WXU2 420 aa7.92□□□□□ -1.14
SDCBP-203ENST00000424270 ARNTL2Q8WYA1 636 aa7.92□□□□□ -1.14
SDCBP-203ENST00000424270 FEZ1Q99689 392 aa7.92□□□□□ -1.14
SDCBP-203ENST00000424270 CD320Q9NPF0 282 aa7.92□□□□□ -1.14
SDCBP-203ENST00000424270 C9orf78Q9NZ63 289 aaPredicted RBP7.92□□□□□ -1.14
SDCBP-203ENST00000424270 MTCH2Q9Y6C9 303 aa7.92□□□□□ -1.14
SDCBP-203ENST00000424270 SLC4A7Q9Y6M7 1214 aa7.92□□□□□ -1.14
SDCBP-203ENST00000424270 ZNF521Q96K83 1311 aa7.92□□□□□ -1.14
SDCBP-203ENST00000424270 C19orf81C9J6K1 198 aa7.91□□□□□ -1.14
SDCBP-203ENST00000424270 USP17L10C9JJH3 530 aa7.91□□□□□ -1.14
SDCBP-203ENST00000424270 TLR3O15455 904 aaKnown RBP7.91□□□□□ -1.14
SDCBP-203ENST00000424270 MYOGP15173 224 aa7.91□□□□□ -1.14
SDCBP-203ENST00000424270 CAP2P40123 477 aa7.91□□□□□ -1.14
SDCBP-203ENST00000424270 WDR43Q15061 677 aaKnown RBP eCLIP7.91□□□□□ -1.14
SDCBP-203ENST00000424270 ZYXQ15942 572 aaKnown RBP7.91□□□□□ -1.14
SDCBP-203ENST00000424270 KRT40Q6A162 431 aa7.91□□□□□ -1.14
SDCBP-203ENST00000424270 IDI2Q9BXS1 227 aa7.91□□□□□ -1.14
SDCBP-203ENST00000424270 GNL3LQ9NVN8 582 aaKnown RBP7.91□□□□□ -1.14
SDCBP-203ENST00000424270 IFT57Q9NWB7 429 aa7.91□□□□□ -1.14
SDCBP-203ENST00000424270 RABGAP1Q9Y3P9 1069 aa7.91□□□□□ -1.14
SDCBP-203ENST00000424270 MROH7Q68CQ1 1323 aa7.91□□□□□ -1.14
SDCBP-203ENST00000424270 LOC285556D6RIA3 1793 aa7.91□□□□□ -1.14
SDCBP-203ENST00000424270 PTPRFP10586 1907 aa7.91□□□□□ -1.14
SDCBP-203ENST00000424270 RLFQ13129 1914 aa7.91□□□□□ -1.14
SDCBP-203ENST00000424270 DNAH12Q6ZR08 3092 aa7.9□□□□□ -1.14
SDCBP-203ENST00000424270 PHIPQ8WWQ0 1821 aa7.9□□□□□ -1.14
SDCBP-203ENST00000424270 ZNF536O15090 1300 aa7.9□□□□□ -1.14
SDCBP-203ENST00000424270 ADORA2AP29274 412 aa7.9□□□□□ -1.14
SDCBP-203ENST00000424270 BTDP43251 543 aa7.9□□□□□ -1.14
SDCBP-203ENST00000424270 EVX2Q03828 476 aa7.9□□□□□ -1.14
SDCBP-203ENST00000424270 GRB14Q14449 540 aa7.9□□□□□ -1.14
SDCBP-203ENST00000424270 PUM3Q15397 648 aaKnown RBP7.9□□□□□ -1.14
SDCBP-203ENST00000424270 TMEM67Q5HYA8 995 aa7.9□□□□□ -1.14
SDCBP-203ENST00000424270 C16orf59Q7L2K0 433 aa7.9□□□□□ -1.14
SDCBP-203ENST00000424270 G2E3Q7L622 706 aa7.9□□□□□ -1.14
SDCBP-203ENST00000424270 CRACR2BQ8N4Y2 399 aaPredicted RBP7.9□□□□□ -1.14
SDCBP-203ENST00000424270 RUNDC1Q96C34 613 aa7.9□□□□□ -1.14
SDCBP-203ENST00000424270 TOX2Q96NM4 488 aa7.9□□□□□ -1.14
SDCBP-203ENST00000424270 IL23AQ9NPF7 189 aa7.9□□□□□ -1.14
SDCBP-203ENST00000424270 PCDHA11Q9Y5I1 949 aa7.9□□□□□ -1.14
SDCBP-203ENST00000424270 USP17L15C9J2P7 530 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 USP17L13C9JLJ4 530 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 USP17L11C9JVI0 530 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 USP17L18D6R9N7 530 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 USP17L22D6RA61 530 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 USP17L17D6RBQ6 530 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 USP17L19D6RCP7 530 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 USP17L20D6RJB6 530 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 TBC1D12O60347 775 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 PDE8BO95263 885 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 CA3P07451 260 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 ASNSP08243 561 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 HOXC6P09630 235 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 ATP2A2P16615 1042 aaKnown RBP7.89□□□□□ -1.15
SDCBP-203ENST00000424270 KCNA5P22460 613 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 CYP2C18P33260 490 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 MAP3K10Q02779 954 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 USP17L24Q0WX57 530 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 FLIIQ13045 1269 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 PLS1Q14651 629 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 RASIP1Q5U651 963 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 OLFML2BQ68BL8 750 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 USP17L2Q6R6M4 530 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 EP400NLQ6ZTU2 488 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 HFE2Q6ZVN8 426 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 ERMP1Q7Z2K6 904 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 ANKRD33Q7Z3H0 272 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 ZGPATQ8N5A5 531 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms