RNA–Protein interactions for RNA: ENST00000424192.6

LMO3-206, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 983 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-206ENST00000424192 ZNF280CQ8ND82 737 aa13.9□□□□□ -0.18
LMO3-206ENST00000424192 ZFP91Q96JP5 570 aaPredicted RBP13.9□□□□□ -0.18
LMO3-206ENST00000424192 WDR18Q9BV38 432 aa13.9□□□□□ -0.18
LMO3-206ENST00000424192 SH2D4AQ9H788 454 aa13.9□□□□□ -0.18
LMO3-206ENST00000424192 MKNK2Q9HBH9 465 aa13.9□□□□□ -0.18
LMO3-206ENST00000424192 ZHX2Q9Y6X8 837 aa13.9□□□□□ -0.18
LMO3-206ENST00000424192 PLIN4Q96Q06 1357 aa13.9□□□□□ -0.18
LMO3-206ENST00000424192 CYP2D7A0A087X1C5 515 aa13.89□□□□□ -0.19
LMO3-206ENST00000424192 CCL15-CCL14A0A0B4J2E2 113 aa13.89□□□□□ -0.19
LMO3-206ENST00000424192 TESPA1A2RU30 521 aaPredicted RBP13.89□□□□□ -0.19
LMO3-206ENST00000424192 MPHOSPH10O00566 681 aaKnown RBP13.89□□□□□ -0.19
LMO3-206ENST00000424192 IRF6O14896 467 aa13.89□□□□□ -0.19
LMO3-206ENST00000424192 EIF5BO60841 1220 aaKnown RBP13.89□□□□□ -0.19
LMO3-206ENST00000424192 GH2P01242 217 aa13.89□□□□□ -0.19
LMO3-206ENST00000424192 FGAP02671 866 aa13.89□□□□□ -0.19
LMO3-206ENST00000424192 TM4SF4P48230 202 aa13.89□□□□□ -0.19
LMO3-206ENST00000424192 PSEN1P49768 467 aa13.89□□□□□ -0.19
LMO3-206ENST00000424192 PDAP1Q13442 181 aaKnown RBP13.89□□□□□ -0.19
LMO3-206ENST00000424192 CCL15Q16663 113 aa13.89□□□□□ -0.19
LMO3-206ENST00000424192 IMMTQ16891 758 aaKnown RBP13.89□□□□□ -0.19
LMO3-206ENST00000424192 SLC44A5Q8NCS7 719 aa13.89□□□□□ -0.19
LMO3-206ENST00000424192 DYNLL2Q96FJ2 89 aa13.89□□□□□ -0.19
LMO3-206ENST00000424192 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.89□□□□□ -0.19
LMO3-206ENST00000424192 LOC285556D6RIA3 1793 aa13.88□□□□□ -0.19
LMO3-206ENST00000424192 PHIPQ8WWQ0 1821 aa13.88□□□□□ -0.19
LMO3-206ENST00000424192 A0A0G2JLL6 359 aaPredicted RBP13.88□□□□□ -0.19
LMO3-206ENST00000424192 USP14P54578 494 aa13.88□□□□□ -0.19
LMO3-206ENST00000424192 MKRN3Q13064 507 aaKnown RBP13.88□□□□□ -0.19
LMO3-206ENST00000424192 PRRT2Q7Z6L0 340 aaPredicted RBP13.88□□□□□ -0.19
LMO3-206ENST00000424192 SKAP1Q86WV1 359 aa13.88□□□□□ -0.19
LMO3-206ENST00000424192 PROCA1Q8NCQ7 364 aaPredicted RBP13.88□□□□□ -0.19
LMO3-206ENST00000424192 FEZ1Q99689 392 aa13.88□□□□□ -0.19
LMO3-206ENST00000424192 ESYT1Q9BSJ8 1104 aa13.88□□□□□ -0.19
LMO3-206ENST00000424192 ARHGEF10LQ9HCE6 1279 aa13.88□□□□□ -0.19
LMO3-206ENST00000424192 WBP1LQ9NX94 342 aa13.88□□□□□ -0.19
LMO3-206ENST00000424192 AFG3L2Q9Y4W6 797 aa13.88□□□□□ -0.19
LMO3-206ENST00000424192 TRIM75PA6NK02 468 aa13.87□□□□□ -0.19
LMO3-206ENST00000424192 C19orf81C9J6K1 198 aa13.87□□□□□ -0.19
LMO3-206ENST00000424192 ZNF213O14771 459 aa13.87□□□□□ -0.19
LMO3-206ENST00000424192 ORC4O43929 436 aa13.87□□□□□ -0.19
LMO3-206ENST00000424192 SLURP2P0DP57 97 aa13.87□□□□□ -0.19
LMO3-206ENST00000424192 ICA1Q05084 483 aa13.87□□□□□ -0.19
LMO3-206ENST00000424192 PABPC4Q13310 644 aaKnown RBP eCLIP13.87□□□□□ -0.19
LMO3-206ENST00000424192 RRP1BQ14684 758 aaKnown RBP13.87□□□□□ -0.19
LMO3-206ENST00000424192 RAB3GAP1Q15042 981 aa13.87□□□□□ -0.19
LMO3-206ENST00000424192 ZNF444Q8N0Y2 327 aaPredicted RBP13.87□□□□□ -0.19
LMO3-206ENST00000424192 STAG1Q8WVM7 1258 aa13.87□□□□□ -0.19
LMO3-206ENST00000424192 MS4A4AQ96JQ5 239 aa13.87□□□□□ -0.19
LMO3-206ENST00000424192 CFHR5Q9BXR6 569 aa13.87□□□□□ -0.19
LMO3-206ENST00000424192 SYNPO2Q9UMS6 1093 aa13.87□□□□□ -0.19
LMO3-206ENST00000424192 SLC45A1Q9Y2W3 748 aa13.87□□□□□ -0.19
LMO3-206ENST00000424192 GREB1LQ9C091 1923 aaPredicted RBP13.87□□□□□ -0.19
LMO3-206ENST00000424192 USP17L10C9JJH3 530 aa13.86□□□□□ -0.19
LMO3-206ENST00000424192 RASA1P20936 1047 aa13.86□□□□□ -0.19
LMO3-206ENST00000424192 SH3D19Q5HYK7 790 aa13.86□□□□□ -0.19
LMO3-206ENST00000424192 ANKRD23Q86SG2 305 aa13.86□□□□□ -0.19
LMO3-206ENST00000424192 BRI3BPQ8WY22 251 aa13.86□□□□□ -0.19
LMO3-206ENST00000424192 CNNM2Q9H8M5 875 aa13.86□□□□□ -0.19
LMO3-206ENST00000424192 KANSL2Q9H9L4 492 aa13.86□□□□□ -0.19
LMO3-206ENST00000424192 BMP2KQ9NSY1 1161 aaPredicted RBP13.86□□□□□ -0.19
LMO3-206ENST00000424192 TMOD4Q9NZQ9 345 aa13.86□□□□□ -0.19
LMO3-206ENST00000424192 PNMA3Q9UL41 463 aa13.86□□□□□ -0.19
LMO3-206ENST00000424192 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.86□□□□□ -0.19
LMO3-206ENST00000424192 PTPRFP10586 1907 aa13.86□□□□□ -0.19
LMO3-206ENST00000424192 TSPY2A6NKD2 308 aa13.85□□□□□ -0.19
LMO3-206ENST00000424192 REC8O95072 547 aa13.85□□□□□ -0.19
LMO3-206ENST00000424192 FGRP09769 529 aa13.85□□□□□ -0.19
LMO3-206ENST00000424192 TSPY3P0CV98 308 aa13.85□□□□□ -0.19
LMO3-206ENST00000424192 TSPY8P0CW00 308 aa13.85□□□□□ -0.19
LMO3-206ENST00000424192 HSPA1AP0DMV8 641 aaKnown RBP13.85□□□□□ -0.19
LMO3-206ENST00000424192 HSPA1BP0DMV9 641 aaKnown RBP13.85□□□□□ -0.19
LMO3-206ENST00000424192 AKR1B1P15121 316 aa13.85□□□□□ -0.19
LMO3-206ENST00000424192 BACE1P56817 501 aa13.85□□□□□ -0.19
LMO3-206ENST00000424192 SPP2Q13103 211 aa13.85□□□□□ -0.19
LMO3-206ENST00000424192 MTMR2Q13614 643 aa13.85□□□□□ -0.19
LMO3-206ENST00000424192 SEPT2Q15019 361 aa13.85□□□□□ -0.19
LMO3-206ENST00000424192 AKNAD1Q5T1N1 836 aa13.85□□□□□ -0.19
LMO3-206ENST00000424192 MFSD6Q6ZSS7 791 aa13.85□□□□□ -0.19
LMO3-206ENST00000424192 ESR2Q92731 530 aa13.85□□□□□ -0.19
LMO3-206ENST00000424192 C12orf42Q96LP6 360 aa13.85□□□□□ -0.19
LMO3-206ENST00000424192 PARK7Q99497 189 aaKnown RBP13.85□□□□□ -0.19
LMO3-206ENST00000424192 KIAA1683Q9H0B3 1180 aa13.85□□□□□ -0.19
LMO3-206ENST00000424192 ANO2Q9NQ90 1003 aa13.85□□□□□ -0.19
LMO3-206ENST00000424192 AGTPBP1Q9UPW5 1226 aa13.85□□□□□ -0.19
LMO3-206ENST00000424192 EPB41L2O43491 1005 aaKnown RBP13.84□□□□□ -0.19
LMO3-206ENST00000424192 TIE1P35590 1138 aa13.84□□□□□ -0.19
LMO3-206ENST00000424192 CTCFP49711 727 aaPredicted RBP13.84□□□□□ -0.19
LMO3-206ENST00000424192 CTDSPL2Q05D32 466 aa13.84□□□□□ -0.19
LMO3-206ENST00000424192 NOM1Q5C9Z4 860 aaKnown RBP13.84□□□□□ -0.19
LMO3-206ENST00000424192 RNF20Q5VTR2 975 aa13.84□□□□□ -0.19
LMO3-206ENST00000424192 USP17L2Q6R6M4 530 aa13.84□□□□□ -0.19
LMO3-206ENST00000424192 GADL1Q6ZQY3 521 aa13.84□□□□□ -0.19
LMO3-206ENST00000424192 LPAR1Q92633 364 aa13.84□□□□□ -0.19
LMO3-206ENST00000424192 MAP4K1Q92918 833 aa13.84□□□□□ -0.19
LMO3-206ENST00000424192 ZIC5Q96T25 663 aa13.84□□□□□ -0.19
LMO3-206ENST00000424192 IL25Q9H293 177 aa13.84□□□□□ -0.19
LMO3-206ENST00000424192 TOMM22Q9NS69 142 aa13.84□□□□□ -0.19
LMO3-206ENST00000424192 IGF2BP3O00425 579 aaKnown RBP eCLIP13.83□□□□□ -0.2
LMO3-206ENST00000424192 PRDM1O75626 825 aa13.83□□□□□ -0.2
LMO3-206ENST00000424192 HMGCS2P54868 508 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms