RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 CDKAL1Q5VV42 579 aa4.11□□□□□ -1.75
PMS1-209ENST00000424059 MPZL3Q6UWV2 235 aa4.11□□□□□ -1.75
PMS1-209ENST00000424059 TMEM87BQ96K49 555 aa4.11□□□□□ -1.75
PMS1-209ENST00000424059 NOC4LQ9BVI4 516 aaKnown RBP4.11□□□□□ -1.75
PMS1-209ENST00000424059 TRAIPQ9BWF2 469 aa4.11□□□□□ -1.75
PMS1-209ENST00000424059 MIR1-1HGQ9H1L0 117 aa4.11□□□□□ -1.75
PMS1-209ENST00000424059 TRIT1Q9H3H1 467 aaKnown RBP4.11□□□□□ -1.75
PMS1-209ENST00000424059 C19orf73Q9NVV2 129 aa4.11□□□□□ -1.75
PMS1-209ENST00000424059 FYB2Q5VWT5 728 aa4.11□□□□□ -1.75
PMS1-209ENST00000424059 LIN37Q96GY3 246 aaPredicted RBP4.11□□□□□ -1.75
PMS1-209ENST00000424059 NFIBO00712 420 aa4.1□□□□□ -1.75
PMS1-209ENST00000424059 CBX7O95931 251 aa4.1□□□□□ -1.75
PMS1-209ENST00000424059 PGRP06401 933 aa4.1□□□□□ -1.75
PMS1-209ENST00000424059 SRFP11831 508 aa4.1□□□□□ -1.75
PMS1-209ENST00000424059 ITGAEP38570 1179 aa4.1□□□□□ -1.75
PMS1-209ENST00000424059 RPL6Q02878 288 aaKnown RBP4.1□□□□□ -1.75
PMS1-209ENST00000424059 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.1□□□□□ -1.75
PMS1-209ENST00000424059 SYDE1Q6ZW31 735 aaPredicted RBP4.1□□□□□ -1.75
PMS1-209ENST00000424059 ANKLE2Q86XL3 938 aa4.1□□□□□ -1.75
PMS1-209ENST00000424059 UBE2FQ969M7 185 aa4.1□□□□□ -1.75
PMS1-209ENST00000424059 TJP2Q9UDY2 1190 aa4.1□□□□□ -1.75
PMS1-209ENST00000424059 TNK2Q07912 1038 aa4.09□□□□□ -1.75
PMS1-209ENST00000424059 SEPT6Q14141 434 aa4.09□□□□□ -1.75
PMS1-209ENST00000424059 EAPPQ56P03 285 aaPredicted RBP4.09□□□□□ -1.75
PMS1-209ENST00000424059 TTC6Q86TZ1 520 aa4.09□□□□□ -1.75
PMS1-209ENST00000424059 MCATQ8IVS2 390 aaKnown RBP4.09□□□□□ -1.75
PMS1-209ENST00000424059 DNAJB8Q8NHS0 232 aa4.09□□□□□ -1.75
PMS1-209ENST00000424059 ABHD4Q8TB40 342 aa4.09□□□□□ -1.75
PMS1-209ENST00000424059 CCDC136Q96JN2 1154 aa4.09□□□□□ -1.75
PMS1-209ENST00000424059 GPR62Q9BZJ7 368 aa4.09□□□□□ -1.75
PMS1-209ENST00000424059 EPB41L4BQ9H329 900 aa4.09□□□□□ -1.75
PMS1-209ENST00000424059 SLAMF8Q9P0V8 285 aa4.09□□□□□ -1.75
PMS1-209ENST00000424059 RAPGEFL1Q9UHV5 662 aa4.09□□□□□ -1.75
PMS1-209ENST00000424059 TMEM59LQ9UK28 342 aa4.09□□□□□ -1.75
PMS1-209ENST00000424059 KCNH3Q9ULD8 1083 aa4.09□□□□□ -1.75
PMS1-209ENST00000424059 CCDC9Q9Y3X0 531 aaKnown RBP4.09□□□□□ -1.75
PMS1-209ENST00000424059 CNTNAP4Q9C0A0 1308 aa4.09□□□□□ -1.75
PMS1-209ENST00000424059 HPXP02790 462 aa4.09□□□□□ -1.76
PMS1-209ENST00000424059 MED14OSP0DP75 135 aa4.09□□□□□ -1.76
PMS1-209ENST00000424059 C1QL4Q86Z23 238 aa4.09□□□□□ -1.76
PMS1-209ENST00000424059 LILRA2Q8N149 483 aa4.09□□□□□ -1.76
PMS1-209ENST00000424059 ZSWIM5Q9P217 1185 aa4.09□□□□□ -1.76
PMS1-209ENST00000424059 CEP131Q9UPN4 1083 aa4.09□□□□□ -1.76
PMS1-209ENST00000424059 PCDHB5Q9Y5E4 795 aa4.09□□□□□ -1.76
PMS1-209ENST00000424059 ESR1P03372 595 aa4.08□□□□□ -1.76
PMS1-209ENST00000424059 ZEB1P37275 1124 aaPredicted RBP4.08□□□□□ -1.76
PMS1-209ENST00000424059 YARSP54577 528 aaKnown RBP4.08□□□□□ -1.76
PMS1-209ENST00000424059 GAB4Q2WGN9 574 aa4.08□□□□□ -1.76
PMS1-209ENST00000424059 TMEM201Q5SNT2 666 aa4.08□□□□□ -1.76
PMS1-209ENST00000424059 PRR23BQ6ZRT6 265 aa4.08□□□□□ -1.76
PMS1-209ENST00000424059 CDH24Q86UP0 819 aa4.08□□□□□ -1.76
PMS1-209ENST00000424059 RIN3Q8TB24 985 aa4.08□□□□□ -1.76
PMS1-209ENST00000424059 CYB5D2Q8WUJ1 264 aa4.08□□□□□ -1.76
PMS1-209ENST00000424059 DHX38Q92620 1227 aaKnown RBP4.08□□□□□ -1.76
PMS1-209ENST00000424059 SLC26A8Q96RN1 970 aa4.08□□□□□ -1.76
PMS1-209ENST00000424059 NSUN3Q9H649 340 aaKnown RBP4.08□□□□□ -1.76
PMS1-209ENST00000424059 GPATCH2Q9NW75 528 aa4.08□□□□□ -1.76
PMS1-209ENST00000424059 TFE3P19532 575 aaPredicted RBP4.07□□□□□ -1.76
PMS1-209ENST00000424059 CDK8P49336 464 aa4.07□□□□□ -1.76
PMS1-209ENST00000424059 LCE5AQ5TCM9 118 aa4.07□□□□□ -1.76
PMS1-209ENST00000424059 ERICH6BQ5W0A0 696 aa4.07□□□□□ -1.76
PMS1-209ENST00000424059 LRRC56Q8IYG6 542 aaPredicted RBP4.07□□□□□ -1.76
PMS1-209ENST00000424059 RNF141Q8WVD5 230 aa4.07□□□□□ -1.76
PMS1-209ENST00000424059 MYLIPQ8WY64 445 aa4.07□□□□□ -1.76
PMS1-209ENST00000424059 DUSP9Q99956 384 aaKnown RBP4.07□□□□□ -1.76
PMS1-209ENST00000424059 TMEM253P0C7T8 217 aa4.07□□□□□ -1.76
PMS1-209ENST00000424059 GLDCP23378 1020 aa4.07□□□□□ -1.76
PMS1-209ENST00000424059 CFPP27918 469 aa4.07□□□□□ -1.76
PMS1-209ENST00000424059 TAF1CQ15572 869 aaPredicted RBP4.07□□□□□ -1.76
PMS1-209ENST00000424059 AMIGO3Q86WK7 504 aa4.07□□□□□ -1.76
PMS1-209ENST00000424059 IRF2BP1Q8IU81 584 aa4.07□□□□□ -1.76
PMS1-209ENST00000424059 OXR1Q8N573 874 aa4.07□□□□□ -1.76
PMS1-209ENST00000424059 PDZD8Q8NEN9 1154 aa4.07□□□□□ -1.76
PMS1-209ENST00000424059 XAGE3Q8WTP9 111 aa4.07□□□□□ -1.76
PMS1-209ENST00000424059 DCP1AQ9NPI6 582 aaPredicted RBP4.07□□□□□ -1.76
PMS1-209ENST00000424059 TPP2P29144 1249 aaPredicted RBP4.06□□□□□ -1.76
PMS1-209ENST00000424059 DAB2P98082 770 aa4.06□□□□□ -1.76
PMS1-209ENST00000424059 RBM10P98175 930 aaKnown RBP4.06□□□□□ -1.76
PMS1-209ENST00000424059 LMNB2Q03252 620 aa4.06□□□□□ -1.76
PMS1-209ENST00000424059 NR0B2Q15466 257 aa4.06□□□□□ -1.76
PMS1-209ENST00000424059 TSPYL5Q86VY4 417 aaPredicted RBP4.06□□□□□ -1.76
PMS1-209ENST00000424059 TICAM2Q86XR7 235 aa4.06□□□□□ -1.76
PMS1-209ENST00000424059 CREG2Q8IUH2 290 aa4.06□□□□□ -1.76
PMS1-209ENST00000424059 PHC3Q8NDX5 983 aa4.06□□□□□ -1.76
PMS1-209ENST00000424059 SYTL4Q96C24 671 aaPredicted RBP4.06□□□□□ -1.76
PMS1-209ENST00000424059 ACSF2Q96CM8 615 aaPredicted RBP4.06□□□□□ -1.76
PMS1-209ENST00000424059 Q96M66 194 aa4.06□□□□□ -1.76
PMS1-209ENST00000424059 ASPNQ9BXN1 380 aa4.06□□□□□ -1.76
PMS1-209ENST00000424059 DUSP15Q9H1R2 295 aaPredicted RBP4.06□□□□□ -1.76
PMS1-209ENST00000424059 SLC6A17Q9H1V8 727 aa4.06□□□□□ -1.76
PMS1-209ENST00000424059 CD320Q9NPF0 282 aa4.06□□□□□ -1.76
PMS1-209ENST00000424059 DUSP13Q9UII6 198 aa4.06□□□□□ -1.76
PMS1-209ENST00000424059 FITM1A5D6W6 292 aa4.05□□□□□ -1.76
PMS1-209ENST00000424059 TCAF2A6NFQ2 919 aa4.05□□□□□ -1.76
PMS1-209ENST00000424059 CILPO75339 1184 aa4.05□□□□□ -1.76
PMS1-209ENST00000424059 BPNT1O95861 308 aa4.05□□□□□ -1.76
PMS1-209ENST00000424059 IRX6P78412 446 aaPredicted RBP4.05□□□□□ -1.76
PMS1-209ENST00000424059 PWP1Q13610 501 aa4.05□□□□□ -1.76
PMS1-209ENST00000424059 SND1Q7KZF4 910 aaKnown RBP eCLIP4.05□□□□□ -1.76
PMS1-209ENST00000424059 FAM13CQ8NE31 585 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms