RNA–Protein interactions for RNA: ENST00000422453.6

CNBP-201, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNBP, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-201ENST00000422453 CDK8P49336 464 aa16.69■□□□□ 0.26
CNBP-201ENST00000422453 NUCB1Q02818 461 aa16.69■□□□□ 0.26
CNBP-201ENST00000422453 SEPT2Q15019 361 aa16.69■□□□□ 0.26
CNBP-201ENST00000422453 TMEM179Q6ZVK1 233 aa16.69■□□□□ 0.26
CNBP-201ENST00000422453 NBPF11Q86T75 865 aa16.69■□□□□ 0.26
CNBP-201ENST00000422453 CCDC17Q96LX7 622 aa16.69■□□□□ 0.26
CNBP-201ENST00000422453 BAZ2AQ9UIF9 1905 aaKnown RBP16.69■□□□□ 0.26
CNBP-201ENST00000422453 HOXA7P31268 230 aaPredicted RBP16.69■□□□□ 0.26
CNBP-201ENST00000422453 SOX10P56693 466 aa16.69■□□□□ 0.26
CNBP-201ENST00000422453 SLC9C1Q4G0N8 1177 aa16.69■□□□□ 0.26
CNBP-201ENST00000422453 ZMYM1Q5SVZ6 1142 aa16.69■□□□□ 0.26
CNBP-201ENST00000422453 C16orf86Q6ZW13 317 aa16.69■□□□□ 0.26
CNBP-201ENST00000422453 TRIM47Q96LD4 638 aa16.69■□□□□ 0.26
CNBP-201ENST00000422453 PTCH2Q9Y6C5 1203 aa16.69■□□□□ 0.26
CNBP-201ENST00000422453 PATL2C9JE40 543 aaKnown RBP16.68■□□□□ 0.26
CNBP-201ENST00000422453 FAM110CQ1W6H9 321 aa16.68■□□□□ 0.26
CNBP-201ENST00000422453 SBK1Q52WX2 424 aa16.68■□□□□ 0.26
CNBP-201ENST00000422453 RAET1EQ8TD07 263 aa16.68■□□□□ 0.26
CNBP-201ENST00000422453 SEC62Q99442 399 aaKnown RBP16.68■□□□□ 0.26
CNBP-201ENST00000422453 KIAA1683Q9H0B3 1180 aa16.68■□□□□ 0.26
CNBP-201ENST00000422453 MKNK2Q9HBH9 465 aa16.68■□□□□ 0.26
CNBP-201ENST00000422453 EMILIN3Q9NT22 766 aa16.68■□□□□ 0.26
CNBP-201ENST00000422453 SRRDQ9UH36 339 aa16.68■□□□□ 0.26
CNBP-201ENST00000422453 LOC285556D6RIA3 1793 aa16.68■□□□□ 0.26
CNBP-201ENST00000422453 ACER1Q8TDN7 264 aa16.67■□□□□ 0.26
CNBP-201ENST00000422453 RILPL2Q969X0 211 aa16.67■□□□□ 0.26
CNBP-201ENST00000422453 ARHGEF10LQ9HCE6 1279 aa16.67■□□□□ 0.26
CNBP-201ENST00000422453 TNPO2O14787 897 aaKnown RBP16.66■□□□□ 0.26
CNBP-201ENST00000422453 AKR1B1P15121 316 aa16.66■□□□□ 0.26
CNBP-201ENST00000422453 CTGFP29279 349 aa16.66■□□□□ 0.26
CNBP-201ENST00000422453 GUCY1A2P33402 732 aa16.66■□□□□ 0.26
CNBP-201ENST00000422453 STK11IPQ8N1F8 1099 aa16.66■□□□□ 0.26
CNBP-201ENST00000422453 C12orf42Q96LP6 360 aa16.66■□□□□ 0.26
CNBP-201ENST00000422453 P2RX7Q99572 595 aaKnown RBP16.66■□□□□ 0.26
CNBP-201ENST00000422453 NAPBQ9H115 298 aa16.66■□□□□ 0.26
CNBP-201ENST00000422453 SH2D4AQ9H788 454 aa16.66■□□□□ 0.26
CNBP-201ENST00000422453 ZNF287Q9HBT7 754 aa16.66■□□□□ 0.26
CNBP-201ENST00000422453 MYPNQ86TC9 1320 aa16.66■□□□□ 0.26
CNBP-201ENST00000422453 USP17L15C9J2P7 530 aa16.65■□□□□ 0.26
CNBP-201ENST00000422453 USP17L13C9JLJ4 530 aa16.65■□□□□ 0.26
CNBP-201ENST00000422453 USP17L11C9JVI0 530 aa16.65■□□□□ 0.26
CNBP-201ENST00000422453 USP17L18D6R9N7 530 aa16.65■□□□□ 0.26
CNBP-201ENST00000422453 USP17L22D6RA61 530 aa16.65■□□□□ 0.26
CNBP-201ENST00000422453 USP17L17D6RBQ6 530 aa16.65■□□□□ 0.26
CNBP-201ENST00000422453 USP17L19D6RCP7 530 aa16.65■□□□□ 0.26
CNBP-201ENST00000422453 USP17L20D6RJB6 530 aa16.65■□□□□ 0.26
CNBP-201ENST00000422453 SMIM22K7EJ46 135 aa16.65■□□□□ 0.26
CNBP-201ENST00000422453 ICA1Q05084 483 aa16.65■□□□□ 0.26
CNBP-201ENST00000422453 USP17L24Q0WX57 530 aa16.65■□□□□ 0.26
CNBP-201ENST00000422453 IFNL3Q8IZI9 196 aa16.65■□□□□ 0.26
CNBP-201ENST00000422453 GTF3C2Q8WUA4 911 aaPredicted RBP16.65■□□□□ 0.26
CNBP-201ENST00000422453 COA7Q96BR5 231 aa16.65■□□□□ 0.26
CNBP-201ENST00000422453 SLC3A2P08195 630 aaKnown RBP16.65■□□□□ 0.26
CNBP-201ENST00000422453 RGS19P49795 217 aa16.65■□□□□ 0.26
CNBP-201ENST00000422453 HERVK_113P62684 666 aa16.65■□□□□ 0.26
CNBP-201ENST00000422453 ATP2B2Q01814 1243 aa16.65■□□□□ 0.26
CNBP-201ENST00000422453 MLLT1Q03111 559 aaPredicted RBP16.65■□□□□ 0.26
CNBP-201ENST00000422453 TICAM2Q86XR7 235 aa16.65■□□□□ 0.26
CNBP-201ENST00000422453 PLEKHM2Q8IWE5 1019 aa16.65■□□□□ 0.26
CNBP-201ENST00000422453 ARMC5Q96C12 935 aa16.65■□□□□ 0.26
CNBP-201ENST00000422453 VCAM1P19320 739 aa16.64■□□□□ 0.25
CNBP-201ENST00000422453 CCAR1Q8IX12 1150 aaKnown RBP16.64■□□□□ 0.25
CNBP-201ENST00000422453 OSBPL3Q9H4L5 887 aa16.64■□□□□ 0.25
CNBP-201ENST00000422453 EPB41L4AQ9HCS5 686 aaPredicted RBP16.64■□□□□ 0.25
CNBP-201ENST00000422453 HELLSQ9NRZ9 838 aa16.64■□□□□ 0.25
CNBP-201ENST00000422453 MYH8P13535 1937 aa16.64■□□□□ 0.25
CNBP-201ENST00000422453 HTTP42858 3142 aa16.64■□□□□ 0.25
CNBP-201ENST00000422453 ZSWIM8A7E2V4 1837 aa16.63■□□□□ 0.25
CNBP-201ENST00000422453 PRKCZQ05513 592 aa16.63■□□□□ 0.25
CNBP-201ENST00000422453 CCDC129Q6ZRS4 1044 aa16.63■□□□□ 0.25
CNBP-201ENST00000422453 ZNF444Q8N0Y2 327 aaPredicted RBP16.63■□□□□ 0.25
CNBP-201ENST00000422453 GPRC5AQ8NFJ5 357 aa16.63■□□□□ 0.25
CNBP-201ENST00000422453 TMEM106CQ9BVX2 250 aa16.63■□□□□ 0.25
CNBP-201ENST00000422453 RPAP3Q9H6T3 665 aaPredicted RBP16.63■□□□□ 0.25
CNBP-201ENST00000422453 KANSL2Q9H9L4 492 aa16.63■□□□□ 0.25
CNBP-201ENST00000422453 BIN2Q9UBW5 565 aaPredicted RBP16.63■□□□□ 0.25
CNBP-201ENST00000422453 CENPFP49454 3210 aa16.63■□□□□ 0.25
CNBP-201ENST00000422453 A0A1W2PRG0 241 aa16.62■□□□□ 0.25
CNBP-201ENST00000422453 PDE4BQ07343 736 aa16.62■□□□□ 0.25
CNBP-201ENST00000422453 MCMDC2Q4G0Z9 681 aa16.62■□□□□ 0.25
CNBP-201ENST00000422453 CATSPERGQ6ZRH7 1159 aa16.62■□□□□ 0.25
CNBP-201ENST00000422453 SH3TC2Q8TF17 1288 aa16.62■□□□□ 0.25
CNBP-201ENST00000422453 PAGR1Q9BTK6 254 aa16.62■□□□□ 0.25
CNBP-201ENST00000422453 MORF4L1Q9UBU8 362 aa16.62■□□□□ 0.25
CNBP-201ENST00000422453 GRK4P32298 578 aa16.62■□□□□ 0.25
CNBP-201ENST00000422453 CLEC10AQ8IUN9 316 aa16.62■□□□□ 0.25
CNBP-201ENST00000422453 LPAR1Q92633 364 aa16.62■□□□□ 0.25
CNBP-201ENST00000422453 ZNF333Q96JL9 665 aa16.62■□□□□ 0.25
CNBP-201ENST00000422453 TANGO6Q9C0B7 1094 aa16.62■□□□□ 0.25
CNBP-201ENST00000422453 TMX2Q9Y320 296 aa16.62■□□□□ 0.25
CNBP-201ENST00000422453 ROBO3Q96MS0 1386 aa16.62■□□□□ 0.25
CNBP-201ENST00000422453 RAD21O60216 631 aa16.61■□□□□ 0.25
CNBP-201ENST00000422453 MYCP01106 439 aaPredicted RBP16.61■□□□□ 0.25
CNBP-201ENST00000422453 EEF2P13639 858 aaKnown RBP16.61■□□□□ 0.25
CNBP-201ENST00000422453 FLT3LGP49771 235 aa16.61■□□□□ 0.25
CNBP-201ENST00000422453 FAM227BQ96M60 508 aa16.61■□□□□ 0.25
CNBP-201ENST00000422453 CWC22Q9HCG8 908 aaKnown RBP16.61■□□□□ 0.25
CNBP-201ENST00000422453 GABRQQ9UN88 632 aa16.61■□□□□ 0.25
CNBP-201ENST00000422453 PRDM1O75626 825 aa16.6■□□□□ 0.25
CNBP-201ENST00000422453 RASA1P20936 1047 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms